Armillaria solidipes

Taxonomy: cellular organisms; Eukaryota; Opisthokonta; Fungi; Dikarya; Basidiomycota; Agaricomycotina; Agaricomycetes; Agaricomycetidae; Agaricales; Physalacriaceae; Armillaria

Average proteome isoelectric point is 6.58

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 20715 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A2H3CLT8|A0A2H3CLT8_9AGAR FAS1 domain-containing protein OS=Armillaria solidipes OX=1076256 GN=ARMSODRAFT_1010383 PE=4 SV=1
MM1 pKa = 6.9KK2 pKa = 9.87TLVLSLLSIPFSAVAQYY19 pKa = 7.79TWKK22 pKa = 10.31NVKK25 pKa = 9.87IGGGGGFVPGIVFNPSEE42 pKa = 4.14EE43 pKa = 3.74GLAYY47 pKa = 10.6VRR49 pKa = 11.84TDD51 pKa = 2.33IGGAYY56 pKa = 9.96RR57 pKa = 11.84LNDD60 pKa = 4.05DD61 pKa = 4.65DD62 pKa = 4.02TWTPLTDD69 pKa = 3.14WVDD72 pKa = 3.27NDD74 pKa = 3.56RR75 pKa = 11.84WNMWGVDD82 pKa = 3.84ALATDD87 pKa = 3.79PVEE90 pKa = 4.25TNRR93 pKa = 11.84LYY95 pKa = 11.04LATGMYY101 pKa = 8.35TNSWDD106 pKa = 3.67PDD108 pKa = 3.38NGHH111 pKa = 6.67ILVSEE116 pKa = 4.68DD117 pKa = 3.36YY118 pKa = 11.0GEE120 pKa = 4.96SFAQVDD126 pKa = 4.29LPFKK130 pKa = 10.91VGGNMPGRR138 pKa = 11.84GVGEE142 pKa = 4.12RR143 pKa = 11.84LAVDD147 pKa = 3.76PNSNNILFFGARR159 pKa = 11.84SGNGLYY165 pKa = 10.58KK166 pKa = 10.06STDD169 pKa = 3.5YY170 pKa = 11.45GSTWTQVSSLPDD182 pKa = 3.1VGTYY186 pKa = 10.28VVDD189 pKa = 3.6ATDD192 pKa = 3.34TSGYY196 pKa = 10.72NSDD199 pKa = 3.8PLGIAFVTFDD209 pKa = 3.91STSGSSGSPTPRR221 pKa = 11.84VFVGVASNGTDD232 pKa = 3.1NIFVSEE238 pKa = 4.33DD239 pKa = 3.65AGDD242 pKa = 3.32TWTAIAGQQQTYY254 pKa = 9.21FPHH257 pKa = 6.91KK258 pKa = 10.37GVLSPDD264 pKa = 3.08EE265 pKa = 4.2GLLYY269 pKa = 10.7VSYY272 pKa = 11.46SDD274 pKa = 3.5GTGPYY279 pKa = 10.01DD280 pKa = 3.46GTLGAVYY287 pKa = 10.0KK288 pKa = 10.7YY289 pKa = 10.77DD290 pKa = 3.38IANATWTDD298 pKa = 3.2ITPVSGSDD306 pKa = 3.15LSFGFGGLSVDD317 pKa = 3.79VKK319 pKa = 11.41NPGTLMVAALNLWWPDD335 pKa = 3.16GQIYY339 pKa = 10.44RR340 pKa = 11.84STDD343 pKa = 2.97SGATWSTFWTWGAYY357 pKa = 9.26PEE359 pKa = 4.07INKK362 pKa = 10.02YY363 pKa = 10.5YY364 pKa = 10.5SYY366 pKa = 11.31SDD368 pKa = 4.29SLAPWLGVDD377 pKa = 4.74YY378 pKa = 11.46VDD380 pKa = 3.63TTLGDD385 pKa = 3.8KK386 pKa = 10.73QIGWMMEE393 pKa = 3.94ALSIDD398 pKa = 4.37PFDD401 pKa = 4.74SDD403 pKa = 3.46HH404 pKa = 6.59FLYY407 pKa = 9.0GTGATIYY414 pKa = 10.49GSRR417 pKa = 11.84DD418 pKa = 2.97LTLWDD423 pKa = 3.65SVHH426 pKa = 6.48NISLSSMADD435 pKa = 3.66GIEE438 pKa = 4.06EE439 pKa = 4.12TAVQALISPPGGPSLISGVSDD460 pKa = 2.82IQGFVHH466 pKa = 6.83TDD468 pKa = 3.07LGTPTTSFSSPVWTSVVDD486 pKa = 4.17LDD488 pKa = 4.17YY489 pKa = 11.57AGNVPTNIIRR499 pKa = 11.84LGNGDD504 pKa = 3.83SSTGKK509 pKa = 9.78QVAISTDD516 pKa = 3.44SGTTWSQDD524 pKa = 2.25TGAPDD529 pKa = 3.4NVSGGKK535 pKa = 9.21IAISADD541 pKa = 2.9GDD543 pKa = 4.0TVLWRR548 pKa = 11.84TSSNGVLVSQNTSAFTTVSTLPTSAVIASDD578 pKa = 3.23KK579 pKa = 10.01TNNSVFYY586 pKa = 9.69GASSSSFYY594 pKa = 11.03VSNDD598 pKa = 3.07TGSTFSAVSTLGNSTSPVKK617 pKa = 10.43IVVNPDD623 pKa = 2.7VAGDD627 pKa = 3.5VWVSTDD633 pKa = 2.7VGLFHH638 pKa = 6.53STDD641 pKa = 3.43YY642 pKa = 11.38GSTFMAIEE650 pKa = 4.4SVSQAWAIALGTAATDD666 pKa = 3.46GGYY669 pKa = 9.48PAVFAAANIGDD680 pKa = 3.65GVGYY684 pKa = 10.27YY685 pKa = 10.44RR686 pKa = 11.84SDD688 pKa = 3.87DD689 pKa = 3.96EE690 pKa = 4.68GATWTQINDD699 pKa = 3.19SSLGFSSVSANVMAADD715 pKa = 3.41PRR717 pKa = 11.84VYY719 pKa = 10.28GRR721 pKa = 11.84VYY723 pKa = 10.17IGTNGRR729 pKa = 11.84GIFYY733 pKa = 10.77GDD735 pKa = 3.25ISSSGTSTSSTVGPSSSAAVSTSAAAASSAVTSSIQASPSATTASSSEE783 pKa = 4.19NINGSGSQRR792 pKa = 11.84LL793 pKa = 3.52

Molecular weight: 83.0 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A2H3C3P5|A0A2H3C3P5_9AGAR Uncharacterized protein OS=Armillaria solidipes OX=1076256 GN=ARMSODRAFT_1017547 PE=4 SV=1
SS1 pKa = 5.73TQVQRR6 pKa = 11.84PASAIQRR13 pKa = 11.84PTSIIQRR20 pKa = 11.84PASVVQRR27 pKa = 11.84PSSVIQRR34 pKa = 11.84PASITQRR41 pKa = 11.84PASAAQRR48 pKa = 11.84STLAIQHH55 pKa = 6.54PASAAQRR62 pKa = 11.84QPLAVQQQ69 pKa = 3.7

Molecular weight: 7.38 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

20715

0

20715

7685379

49

4986

371.0

41.26

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

7.774 ± 0.017

1.494 ± 0.007

5.687 ± 0.012

5.675 ± 0.016

3.952 ± 0.011

6.192 ± 0.017

2.593 ± 0.008

5.295 ± 0.011

4.444 ± 0.018

9.528 ± 0.02

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.206 ± 0.007

3.473 ± 0.009

6.162 ± 0.018

3.554 ± 0.01

6.103 ± 0.015

8.803 ± 0.022

6.086 ± 0.011

6.501 ± 0.011

1.579 ± 0.007

2.899 ± 0.009
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski