Cruoricaptor ignavus

Taxonomy: cellular organisms; Bacteria; FCB group; Bacteroidetes/Chlorobi group; Bacteroidetes; Flavobacteriia; Flavobacteriales; Weeksellaceae; Cruoricaptor

Average proteome isoelectric point is 6.63

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 2166 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A1M6BJH3|A0A1M6BJH3_9FLAO Uncharacterized protein OS=Cruoricaptor ignavus OX=1118202 GN=SAMN05443429_10229 PE=4 SV=1
MM1 pKa = 7.23YY2 pKa = 10.14YY3 pKa = 10.19YY4 pKa = 10.61YY5 pKa = 10.85QFFFFSCNEE14 pKa = 4.14DD15 pKa = 3.2EE16 pKa = 6.31SLDD19 pKa = 3.51QSPINEE25 pKa = 4.01NLITSFNKK33 pKa = 10.31SSTTSKK39 pKa = 10.84NSDD42 pKa = 2.77ISEE45 pKa = 4.35VIVFSDD51 pKa = 3.37MTSSDD56 pKa = 3.71EE57 pKa = 4.18NLSGMLEE64 pKa = 4.02GLIVSVDD71 pKa = 3.92LDD73 pKa = 3.62AMKK76 pKa = 9.75ATFTNEE82 pKa = 3.42NEE84 pKa = 4.05AGSIEE89 pKa = 4.07FDD91 pKa = 4.27LIEE94 pKa = 4.79NEE96 pKa = 3.82NSTLSLSGYY105 pKa = 5.52TAKK108 pKa = 10.85NGLSDD113 pKa = 3.67RR114 pKa = 11.84TPRR117 pKa = 11.84WLCGASCVGQGFLISLWDD135 pKa = 4.11GPAPLMDD142 pKa = 3.48IAAAAFKK149 pKa = 10.72LYY151 pKa = 10.97

Molecular weight: 16.65 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A1M6GYM3|A0A1M6GYM3_9FLAO Protein involved in gliding motility GldC OS=Cruoricaptor ignavus OX=1118202 GN=SAMN05443429_11077 PE=4 SV=1
MM1 pKa = 7.84PSGKK5 pKa = 9.32KK6 pKa = 9.59RR7 pKa = 11.84KK8 pKa = 7.05RR9 pKa = 11.84HH10 pKa = 5.11KK11 pKa = 10.59VATHH15 pKa = 5.21KK16 pKa = 10.3RR17 pKa = 11.84KK18 pKa = 9.62KK19 pKa = 9.04RR20 pKa = 11.84RR21 pKa = 11.84RR22 pKa = 11.84ANRR25 pKa = 11.84HH26 pKa = 4.77KK27 pKa = 10.58KK28 pKa = 9.8KK29 pKa = 10.51KK30 pKa = 10.04

Molecular weight: 3.76 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

2166

0

2166

683640

26

2358

315.6

35.63

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

7.325 ± 0.058

0.721 ± 0.015

5.304 ± 0.037

7.223 ± 0.061

5.388 ± 0.046

6.68 ± 0.051

1.676 ± 0.023

7.307 ± 0.05

7.468 ± 0.053

9.076 ± 0.056

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.384 ± 0.022

5.669 ± 0.05

3.634 ± 0.028

3.668 ± 0.031

4.421 ± 0.036

6.22 ± 0.038

5.008 ± 0.036

5.967 ± 0.036

1.039 ± 0.018

3.821 ± 0.034
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski