Pseudomonas sp. M47T1
Average proteome isoelectric point is 6.44
Get precalculated fractions of proteins
Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
All
Note: above files contain also dissociation constants (pKa)
Virtual 2D-PAGE plot for 5675 proteins (isoelectric point calculated using IPC2_protein)
Get csv file with sequences according to given criteria:
* You can choose from 21 different methods for calculating isoelectric point
Summary statistics related to proteome-wise predictions
Protein with the lowest isoelectric point:
>tr|I4N9F8|I4N9F8_9PSED Pyruvate kinase OS=Pseudomonas sp. M47T1 OX=1179778 GN=PMM47T1_02494 PE=3 SV=1
MM1 pKa = 7.23 ATLIGVVSQVIGHH14 pKa = 5.69 VFAMGADD21 pKa = 3.62 GTRR24 pKa = 11.84 RR25 pKa = 11.84 EE26 pKa = 4.15 VHH28 pKa = 5.55 QGDD31 pKa = 3.68 RR32 pKa = 11.84 LFVGEE37 pKa = 4.4 QLDD40 pKa = 3.89 TGADD44 pKa = 3.49 GAVAVHH50 pKa = 6.41 LEE52 pKa = 3.95 NGKK55 pKa = 9.12 EE56 pKa = 3.87 LTLGRR61 pKa = 11.84 GSEE64 pKa = 4.35 VTLSQQMLGGDD75 pKa = 3.97 WAPHH79 pKa = 5.34 VATQEE84 pKa = 3.92 ATAPTQADD92 pKa = 3.65 LTDD95 pKa = 3.48 VQKK98 pKa = 10.66 IQQAIAAGADD108 pKa = 3.37 PTKK111 pKa = 10.6 AAEE114 pKa = 4.09 ATAAGPAALGTSTQGGAEE132 pKa = 4.25 GGGHH136 pKa = 5.93 SFVLLTEE143 pKa = 4.19 TGGAIAPVLGYY154 pKa = 8.98 ATAGFNGVADD164 pKa = 3.8 FTVPQVAALTNANTAALVVDD184 pKa = 4.08 NGVTLTGLGNGVSVDD199 pKa = 3.81 EE200 pKa = 5.15 ANLADD205 pKa = 4.15 GSNPQTAALTQSSSFTVTAADD226 pKa = 3.77 GLSNLVVGGITVVNNGAVVGIGQSITTGLGNTLTITGYY264 pKa = 10.92 NPTTGQVSYY273 pKa = 10.66 SYY275 pKa = 10.06 TLTGPDD281 pKa = 3.51 TQPAGGGANTVTEE294 pKa = 4.14 NLGVSATDD302 pKa = 3.53 SNGTNSSGSFTVTVVDD318 pKa = 5.09 DD319 pKa = 4.13 VPHH322 pKa = 7.42 AINDD326 pKa = 3.83 NPTTPATEE334 pKa = 3.99 QNLVLTGNVLTNDD347 pKa = 2.84 IQGADD352 pKa = 4.77 RR353 pKa = 11.84 IPITATSGPITAGTYY368 pKa = 8.03 TGTYY372 pKa = 6.92 GTLVLASDD380 pKa = 4.11 GTYY383 pKa = 10.16 TYY385 pKa = 9.95 TLNAAGQAFNDD396 pKa = 3.51 LHH398 pKa = 7.78 GGGKK402 pKa = 8.49 GTDD405 pKa = 3.11 SFTYY409 pKa = 9.54 TLNDD413 pKa = 3.62 ADD415 pKa = 5.02 GDD417 pKa = 3.93 TSTAVLTLNINNINDD432 pKa = 3.74 AVTITAPDD440 pKa = 3.58 VNGVNTTVNEE450 pKa = 3.94 ANLANGSSPAAAALTQTGQFTVSAPDD476 pKa = 3.5 GLQTLTIGGVSVVTNGVGISSPVSVVTQLGTLTINSYY513 pKa = 10.74 NATTGVVSYY522 pKa = 10.85 SYY524 pKa = 10.12 TLTHH528 pKa = 7.25 ADD530 pKa = 3.3 THH532 pKa = 6.94 PDD534 pKa = 3.18 VQGPNTITDD543 pKa = 4.03 TFAVVATDD551 pKa = 3.64 TDD553 pKa = 3.74 GSTASTQLTTTIVDD567 pKa = 4.0 DD568 pKa = 4.1 VPKK571 pKa = 10.71 AVADD575 pKa = 4.01 TEE577 pKa = 4.69 TVTEE581 pKa = 4.42 GVTLQGNVLTNDD593 pKa = 2.95 ASGADD598 pKa = 3.59 GFGGVVGVKK607 pKa = 10.19 AGSDD611 pKa = 3.01 TSTAVSGGVGVAIEE625 pKa = 4.31 GTYY628 pKa = 9.12 GTLTINADD636 pKa = 3.51 GSSSYY641 pKa = 10.19 HH642 pKa = 6.03 ANANITKK649 pKa = 9.94 DD650 pKa = 3.45 GAVSDD655 pKa = 3.86 TFTYY659 pKa = 10.69 SVADD663 pKa = 3.57 KK664 pKa = 11.05 DD665 pKa = 4.19 GDD667 pKa = 3.54 ISTTTVTVTINDD679 pKa = 3.89 AGLKK683 pKa = 8.03 ATNVDD688 pKa = 3.19 GATVFEE694 pKa = 4.52 AALPTGSHH702 pKa = 7.21 PDD704 pKa = 3.04 STAEE708 pKa = 3.97 VGTGTVAGSVTGGVGALTYY727 pKa = 10.67 SLQGADD733 pKa = 3.16 ANGNVTSQYY742 pKa = 9.29 GTLHH746 pKa = 6.71 LNTDD750 pKa = 3.18 GSYY753 pKa = 9.97 TYY755 pKa = 9.64 TLNVAPQVPGLGTLDD770 pKa = 3.45 TFTLVTTDD778 pKa = 3.11 SVGNQVDD785 pKa = 3.75 SQVTIKK791 pKa = 10.53 IVDD794 pKa = 3.84 DD795 pKa = 3.97 TPTAVPDD802 pKa = 3.83 AVTMAEE808 pKa = 4.09 GQIAQGNVLANDD820 pKa = 3.28 ISGADD825 pKa = 3.44 GFAGVVGVRR834 pKa = 11.84 AGSDD838 pKa = 2.72 TSTPVSGGVGTVIAGAYY855 pKa = 8.27 GQLLIQADD863 pKa = 4.59 GSAVYY868 pKa = 9.42 HH869 pKa = 6.51 ANANSVGEE877 pKa = 4.27 AGATDD882 pKa = 3.78 TFTYY886 pKa = 10.96 SVMDD890 pKa = 3.67 KK891 pKa = 10.99 DD892 pKa = 4.55 GDD894 pKa = 3.61 ISTTTVTITINDD906 pKa = 3.71 AGLVAKK912 pKa = 10.41 NVDD915 pKa = 2.99 GVTVFEE921 pKa = 4.74 AALDD925 pKa = 3.89 TTKK928 pKa = 11.11 DD929 pKa = 3.83 GNDD932 pKa = 3.34 LAAGTSTGSHH942 pKa = 7.1 PDD944 pKa = 3.29 SPLEE948 pKa = 4.1 TASGTVVGSVTGGVGTLTYY967 pKa = 10.45 SVYY970 pKa = 10.9 GSDD973 pKa = 3.7 TNGDD977 pKa = 3.21 MKK979 pKa = 10.94 GQYY982 pKa = 10.39 GVIHH986 pKa = 6.31 MNADD990 pKa = 2.99 GTYY993 pKa = 9.09 TYY995 pKa = 10.53 TLVTAPQVAGIGTTEE1010 pKa = 4.1 NFVLVTTDD1018 pKa = 2.72 SAGNHH1023 pKa = 4.97 VVSDD1027 pKa = 3.69 LTIKK1031 pKa = 10.19 IVNDD1035 pKa = 3.38 QPVALADD1042 pKa = 3.78 SVTLTEE1048 pKa = 4.3 GQVAQGNVLANDD1060 pKa = 3.34 VSGADD1065 pKa = 3.41 GFAGVVGVKK1074 pKa = 10.21 AGSDD1078 pKa = 3.19 TTTPVSGGVGSVVVGTYY1095 pKa = 10.87 GEE1097 pKa = 4.32 LVILADD1103 pKa = 3.98 GSSIYY1108 pKa = 9.86 HH1109 pKa = 6.54 ANANSVGVTGATDD1122 pKa = 3.16 VFTYY1126 pKa = 10.7 SVADD1130 pKa = 3.55 KK1131 pKa = 11.05 DD1132 pKa = 4.19 GDD1134 pKa = 3.54 ISTTTVTININDD1146 pKa = 3.77 SGLVAKK1152 pKa = 10.03 NVNGVTVFEE1161 pKa = 4.48 AALDD1165 pKa = 3.96 LVKK1168 pKa = 10.83 DD1169 pKa = 4.34 GNDD1172 pKa = 3.54 LAPGTSVGSHH1182 pKa = 7.15 PDD1184 pKa = 3.1 WTSEE1188 pKa = 4.12 TASGTVAGSVTGGVGALTYY1207 pKa = 10.9 SVFGSDD1213 pKa = 3.52 ASGDD1217 pKa = 3.26 IKK1219 pKa = 10.97 GQYY1222 pKa = 9.49 GVLHH1226 pKa = 6.16 MNADD1230 pKa = 3.28 GTYY1233 pKa = 9.17 TYY1235 pKa = 10.5 TLTTAPQVPGIGTTEE1250 pKa = 4.17 SFTLVTTDD1258 pKa = 2.92 SVGNHH1263 pKa = 5.22 VASTLTVKK1271 pKa = 10.41 IVDD1274 pKa = 4.27 DD1275 pKa = 4.0 QPHH1278 pKa = 6.97 AFPDD1282 pKa = 4.33 FAHH1285 pKa = 6.46 LVEE1288 pKa = 4.8 GQTAQGNVLANDD1300 pKa = 3.34 VSGADD1305 pKa = 3.41 GFAGVVGVKK1314 pKa = 10.47 AGIDD1318 pKa = 3.38 VSKK1321 pKa = 11.09 AVIGGVGTVIQGQYY1335 pKa = 10.93 GEE1337 pKa = 5.26 LIIAADD1343 pKa = 3.82 GTSIYY1348 pKa = 9.66 HH1349 pKa = 6.67 ANANSVGHH1357 pKa = 6.1 FGIDD1361 pKa = 2.97 VFTYY1365 pKa = 10.63 SVADD1369 pKa = 3.55 KK1370 pKa = 11.05 DD1371 pKa = 4.19 GDD1373 pKa = 3.53 ISTTTLTIKK1382 pKa = 10.26 IDD1384 pKa = 3.93 DD1385 pKa = 4.39 SGLKK1389 pKa = 10.05 ASNVNGVTVFEE1400 pKa = 4.48 AALDD1404 pKa = 3.96 LVKK1407 pKa = 10.97 DD1408 pKa = 4.28 GNDD1411 pKa = 3.14 LAAGNSVGSHH1421 pKa = 7.02 PDD1423 pKa = 2.97 WTSEE1427 pKa = 4.12 TASGTVAGSVTGGVGALNYY1446 pKa = 10.29 SVYY1449 pKa = 9.92 GTDD1452 pKa = 3.2 ASGDD1456 pKa = 3.22 IKK1458 pKa = 10.95 GQYY1461 pKa = 9.49 GVLHH1465 pKa = 6.16 MNADD1469 pKa = 3.28 GTYY1472 pKa = 9.41 TYY1474 pKa = 10.03 TLTIAPQVAGIGTTEE1489 pKa = 4.04 TFAVVTTDD1497 pKa = 3.04 SVGNHH1502 pKa = 5.27 VASTLTIKK1510 pKa = 10.47 IVDD1513 pKa = 4.61 DD1514 pKa = 3.73 QPQAYY1519 pKa = 8.99 PDD1521 pKa = 3.84 FAHH1524 pKa = 6.08 ITEE1527 pKa = 4.59 GQTAQGNVLANDD1539 pKa = 3.34 VSGADD1544 pKa = 3.41 GFAGVVGVKK1553 pKa = 10.32 AGADD1557 pKa = 3.3 TSKK1560 pKa = 11.19 AVTTGVGTVIQGQYY1574 pKa = 11.14 GEE1576 pKa = 4.95 LFIAADD1582 pKa = 3.91 GTSTYY1587 pKa = 9.9 HH1588 pKa = 7.16 ANANSVNHH1596 pKa = 6.04 VGIDD1600 pKa = 3.3 VFTYY1604 pKa = 10.64 SVADD1608 pKa = 3.55 KK1609 pKa = 11.05 DD1610 pKa = 4.19 GDD1612 pKa = 3.53 ISTTTLTIKK1621 pKa = 10.75 VGDD1624 pKa = 3.84 SHH1626 pKa = 6.79 LTATNVDD1633 pKa = 3.36 GVTVFEE1639 pKa = 4.6 AALDD1643 pKa = 3.96 LVKK1646 pKa = 10.97 DD1647 pKa = 4.28 GNDD1650 pKa = 3.14 LAAGNSVGSHH1660 pKa = 7.02 PDD1662 pKa = 2.97 WTSEE1666 pKa = 4.12 TASGTVAGSVTGGVGALNYY1685 pKa = 10.29 SVYY1688 pKa = 9.92 GTDD1691 pKa = 3.2 ASGDD1695 pKa = 3.22 IKK1697 pKa = 10.95 GQYY1700 pKa = 9.49 GVLHH1704 pKa = 6.16 MNADD1708 pKa = 3.28 GTYY1711 pKa = 9.17 TYY1713 pKa = 10.5 TLTTAPQVAGIGTTEE1728 pKa = 4.04 TFAVVTTDD1736 pKa = 3.04 SVGNHH1741 pKa = 5.59 VASQLTIKK1749 pKa = 10.44 IVDD1752 pKa = 4.51 DD1753 pKa = 3.73 QPQAYY1758 pKa = 8.1 PDD1760 pKa = 3.59 SAHH1763 pKa = 6.62 ILEE1766 pKa = 4.8 GQLAQGNVLQNDD1778 pKa = 3.38 VSGADD1783 pKa = 3.38 GFAGVVGVKK1792 pKa = 10.25 AGSDD1796 pKa = 3.0 TSTNVLGGVGTIIQGQYY1813 pKa = 8.53 GQLVIAADD1821 pKa = 3.99 GSSYY1825 pKa = 11.2 YY1826 pKa = 10.11 HH1827 pKa = 7.05 ANPNSAAAGDD1837 pKa = 3.84 VTDD1840 pKa = 3.6 TFVYY1844 pKa = 10.51 SVADD1848 pKa = 3.42 KK1849 pKa = 11.24 DD1850 pKa = 4.16 GDD1852 pKa = 3.82 VSTTTLTISIGNAGLHH1868 pKa = 5.77 IVPGDD1873 pKa = 3.66 GAGVTVAEE1881 pKa = 4.7 AALDD1885 pKa = 3.98 LNQDD1889 pKa = 3.84 GKK1891 pKa = 10.87 DD1892 pKa = 3.51 LAAGTVTGSNPDD1904 pKa = 3.22 STAEE1908 pKa = 4.03 TGSGSVAGSVAGGVGTITYY1927 pKa = 10.25 SIDD1930 pKa = 3.31 GASNGLFTTAHH1941 pKa = 6.39 GVIQLNADD1949 pKa = 3.37 GSYY1952 pKa = 10.15 TYY1954 pKa = 10.59 TLTSAPKK1961 pKa = 9.5 TDD1963 pKa = 3.75 PSANNGADD1971 pKa = 3.34 TTTDD1975 pKa = 3.04 TVTYY1979 pKa = 10.19 RR1980 pKa = 11.84 ATDD1983 pKa = 3.45 SQGNTITNQLTINITDD1999 pKa = 4.32 DD2000 pKa = 3.56 VPQAGAIDD2008 pKa = 3.71 RR2009 pKa = 11.84 AVIAPEE2015 pKa = 3.96 VNSNVLLVIDD2025 pKa = 4.9 ISGSMDD2031 pKa = 3.54 DD2032 pKa = 3.76 PSGVGKK2038 pKa = 10.83 LSRR2041 pKa = 11.84 LDD2043 pKa = 3.64 LAKK2046 pKa = 10.94 VSIDD2050 pKa = 3.71 KK2051 pKa = 11.13 LLDD2054 pKa = 3.3 QYY2056 pKa = 12.06 SGMGDD2061 pKa = 3.2 VKK2063 pKa = 10.83 VQVVTFSNGVSTPSSVWVDD2082 pKa = 3.13 VATAKK2087 pKa = 10.69 AYY2089 pKa = 9.85 IAGLHH2094 pKa = 6.29 ANGGTNYY2101 pKa = 10.75 DD2102 pKa = 3.82 YY2103 pKa = 11.32 ALSGAEE2109 pKa = 4.31 SAFNTNGKK2117 pKa = 9.31 LVGGQNVAYY2126 pKa = 9.53 FFSDD2130 pKa = 3.75 GNPTLSSTHH2139 pKa = 5.74 PTSGGSQSGSEE2150 pKa = 4.23 TNPNLGDD2157 pKa = 4.53 GIDD2160 pKa = 3.76 TTEE2163 pKa = 3.91 EE2164 pKa = 4.08 KK2165 pKa = 10.76 AWTDD2169 pKa = 3.47 FLNANDD2175 pKa = 3.42 IKK2177 pKa = 11.02 AYY2179 pKa = 10.36 AIGLGNGVDD2188 pKa = 3.78 SQYY2191 pKa = 11.14 LNPIAYY2197 pKa = 9.79 DD2198 pKa = 3.48 GTTGTNTNATVVTNLNNLGSVLSGTVQAVALTGSLLTNGTFGADD2242 pKa = 2.84 GGFIKK2247 pKa = 10.63 SITIDD2252 pKa = 3.52 GVTYY2256 pKa = 9.67 TYY2258 pKa = 10.88 DD2259 pKa = 3.31 PKK2261 pKa = 11.5 ANNGEE2266 pKa = 4.18 GGMTTAGGTSAGTFDD2281 pKa = 3.59 TTTNSISVATSHH2293 pKa = 6.5 GSTVVVDD2300 pKa = 4.3 MDD2302 pKa = 3.74 NGAYY2306 pKa = 8.61 TYY2308 pKa = 11.03 SSASSGSTATFTDD2321 pKa = 3.15 KK2322 pKa = 10.54 VTFVLADD2329 pKa = 3.48 NDD2331 pKa = 4.07 GDD2333 pKa = 4.15 LSNAANLDD2341 pKa = 3.32 ITVTPNSPPVAVADD2355 pKa = 3.75 HH2356 pKa = 6.8 VITNILSSTIIVPSEE2371 pKa = 3.4 ALAANDD2377 pKa = 3.49 TDD2379 pKa = 5.17 ANGDD2383 pKa = 4.03 PLTVANTGFDD2393 pKa = 3.57 TGWAPKK2399 pKa = 10.42 GADD2402 pKa = 3.52 FTATTVQTIQFNGTSNLSSNQIKK2425 pKa = 9.73 TIDD2428 pKa = 3.36 RR2429 pKa = 11.84 SDD2431 pKa = 3.87 FNANTSNMTALLVVSGFLGAVGFGSNANASDD2462 pKa = 4.34 SITVHH2467 pKa = 6.34 LKK2469 pKa = 10.66 AGEE2472 pKa = 4.13 SLNLSDD2478 pKa = 5.67 ASNSHH2483 pKa = 7.2 LNMTWQLGNGSATTLGDD2500 pKa = 3.57 GGVLTASTDD2509 pKa = 3.07 GDD2511 pKa = 4.0 YY2512 pKa = 10.78 TIHH2515 pKa = 6.53 VSHH2518 pKa = 7.2 AANHH2522 pKa = 6.19 TGQTAYY2528 pKa = 9.78 TLDD2531 pKa = 3.34 MSINYY2536 pKa = 9.6 AGAANYY2542 pKa = 9.17 TPDD2545 pKa = 3.92 LPATYY2550 pKa = 9.37 TVTDD2554 pKa = 3.42 NHH2556 pKa = 6.63 GGSDD2560 pKa = 3.3 TAAATITYY2568 pKa = 10.04 QDD2570 pKa = 3.27 GHH2572 pKa = 6.13 TLTGTAGDD2580 pKa = 5.47 DD2581 pKa = 3.29 ILISNDD2587 pKa = 3.22 SGSTLLGLAGNDD2599 pKa = 3.52 FMIGGAGNDD2608 pKa = 3.75 KK2609 pKa = 10.7 FDD2611 pKa = 4.1 GGTGVNTVSYY2621 pKa = 9.4 HH2622 pKa = 5.29 AAKK2625 pKa = 10.72 GPVTVDD2631 pKa = 3.32 LSNTGVQDD2639 pKa = 3.66 TVNAGHH2645 pKa = 7.03 DD2646 pKa = 3.46 QLINIQNLIGSDD2658 pKa = 3.82 YY2659 pKa = 11.22 GDD2661 pKa = 3.95 HH2662 pKa = 6.56 LTGNSQANVITGGAGNDD2679 pKa = 3.74 VINGGGGNDD2688 pKa = 3.93 TIIGGLGDD2696 pKa = 3.6 NTLTGGDD2703 pKa = 3.54 GADD2706 pKa = 3.33 TFKK2709 pKa = 11.32 YY2710 pKa = 10.12 LAGNTGHH2717 pKa = 7.21 DD2718 pKa = 4.14 TITDD2722 pKa = 4.38 FALGTDD2728 pKa = 4.08 KK2729 pKa = 11.39 LDD2731 pKa = 4.86 LSQLLQGDD2739 pKa = 4.35 GATASTLDD2747 pKa = 4.1 DD2748 pKa = 3.64 YY2749 pKa = 12.08 LHH2751 pKa = 6.65 FKK2753 pKa = 8.75 VTGSGSGLVSSIDD2766 pKa = 3.47 VSATAGGATTQTIDD2780 pKa = 3.5 LQGVNVATHH2789 pKa = 5.56 YY2790 pKa = 10.97 GITPGAGGTISSHH2803 pKa = 5.95 DD2804 pKa = 3.49 TATIIGGMLGDD2815 pKa = 4.47 HH2816 pKa = 5.92 SLKK2819 pKa = 10.58 VDD2821 pKa = 3.47 VAA2823 pKa = 4.09
Molecular weight: 281.84 kDa
Isoelectric point according different methods:
IPC2.protein.svr19 3.685
IPC2_protein 3.77
IPC_protein 3.859
Toseland 3.605
ProMoST 4.037
Dawson 3.872
Bjellqvist 4.012
Wikipedia 3.834
Rodwell 3.668
Grimsley 3.503
Solomon 3.872
Lehninger 3.821
Nozaki 3.973
DTASelect 4.304
Thurlkill 3.668
EMBOSS 3.846
Sillero 3.986
Patrickios 1.024
IPC_peptide 3.859
IPC2_peptide 3.961
IPC2.peptide.svr19 3.846
Protein with the highest isoelectric point:
>tr|I4N9M8|I4N9M8_9PSED Tricarboxylate transport protein TctC OS=Pseudomonas sp. M47T1 OX=1179778 GN=PMM47T1_02854 PE=3 SV=1
MM1 pKa = 7.79 APRR4 pKa = 11.84 TTTPVITFGRR14 pKa = 11.84 RR15 pKa = 11.84 ATTRR19 pKa = 11.84 RR20 pKa = 11.84 RR21 pKa = 11.84 LITTVLHH28 pKa = 6.23 PAAVTGQAGRR38 pKa = 11.84 AGTVIAHH45 pKa = 5.9 RR46 pKa = 11.84 RR47 pKa = 11.84 RR48 pKa = 11.84 RR49 pKa = 11.84 RR50 pKa = 11.84 GAARR54 pKa = 11.84 VAQAGATGRR63 pKa = 11.84 GTATMTTMVALATAGLAAAAAKK85 pKa = 9.92 AASKK89 pKa = 11.35 ANLL92 pKa = 3.33
Molecular weight: 9.36 kDa
Isoelectric point according different methods:
IPC2.protein.svr19 9.526
IPC2_protein 11.345
IPC_protein 12.954
Toseland 13.115
ProMoST 13.612
Dawson 13.115
Bjellqvist 13.115
Wikipedia 13.598
Rodwell 12.676
Grimsley 13.159
Solomon 13.612
Lehninger 13.51
Nozaki 13.115
DTASelect 13.115
Thurlkill 13.115
EMBOSS 13.612
Sillero 13.115
Patrickios 12.398
IPC_peptide 13.612
IPC2_peptide 12.603
IPC2.peptide.svr19 9.269
Peptides (in silico digests for buttom-up proteomics)
Below you can find
in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.
Try ESI
ChTry ESI
ArgC ESI
LysN ESI
TryLysC ESI
Try MALDI
ChTry MALDI
ArgC MALDI
LysN MALDI
TryLysC MALDI
Try LTQ
ChTry LTQ
ArgC LTQ
LysN LTQ
TryLysC LTQ
Try MSlow
ChTry MSlow
ArgC MSlow
LysN MSlow
TryLysC MSlow
Try MShigh
ChTry MShigh
ArgC MShigh
LysN MShigh
TryLysC MShigh
General Statistics
Number of major isoforms
Number of additional isoforms
Number of all proteins
Number of amino acids
Min. Seq. Length
Max. Seq. Length
Avg. Seq. Length
Avg. Mol. Weight
5675
0
5675
1837506
22
4676
323.8
35.39
Amino acid frequency
Ala
Cys
Asp
Glu
Phe
Gly
His
Ile
Lys
Leu
11.419 ± 0.045
0.988 ± 0.011
5.427 ± 0.024
5.2 ± 0.036
3.585 ± 0.023
8.076 ± 0.033
2.442 ± 0.017
4.594 ± 0.024
3.274 ± 0.029
11.69 ± 0.048
Met
Asn
Gln
Pro
Arg
Ser
Thr
Val
Trp
Tyr
2.344 ± 0.017
2.992 ± 0.02
4.949 ± 0.024
4.712 ± 0.027
6.288 ± 0.035
5.651 ± 0.028
5.036 ± 0.037
7.334 ± 0.027
1.466 ± 0.014
2.532 ± 0.016
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level
Most of the basic statistics you can see at this page can be downloaded from this CSV file
For dipeptide frequency statistics click here