Human adenovirus D serotype 17 (HAdV-17) (Human adenovirus 17)

Taxonomy: Viruses; Varidnaviria; Bamfordvirae; Preplasmiviricota; Tectiliviricetes; Rowavirales; Adenoviridae; Mastadenovirus; Human mastadenovirus D

Average proteome isoelectric point is 6.54

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 8 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|Q9WF16|Q9WF16_ADE17 Pre-hexon-linking protein IIIa OS=Human adenovirus D serotype 17 OX=46922 PE=2 SV=1
MM1 pKa = 7.31HH2 pKa = 7.36PVLRR6 pKa = 11.84QMRR9 pKa = 11.84PTPPATTATAAVAGAGASQPQPQTEE34 pKa = 3.87MDD36 pKa = 3.68LEE38 pKa = 4.42EE39 pKa = 6.32GEE41 pKa = 4.35GLARR45 pKa = 11.84LGAPSPEE52 pKa = 3.6RR53 pKa = 11.84HH54 pKa = 6.33PRR56 pKa = 11.84VQLQKK61 pKa = 10.54DD62 pKa = 3.51VRR64 pKa = 11.84PAYY67 pKa = 10.69VPAQNLFRR75 pKa = 11.84DD76 pKa = 3.85RR77 pKa = 11.84SGEE80 pKa = 3.95EE81 pKa = 3.87PEE83 pKa = 4.09EE84 pKa = 3.87MRR86 pKa = 11.84DD87 pKa = 3.31CRR89 pKa = 11.84FRR91 pKa = 11.84AGRR94 pKa = 11.84EE95 pKa = 3.76LRR97 pKa = 11.84EE98 pKa = 3.94GLDD101 pKa = 3.31RR102 pKa = 11.84QRR104 pKa = 11.84VLRR107 pKa = 11.84DD108 pKa = 2.89EE109 pKa = 5.21DD110 pKa = 4.09FEE112 pKa = 5.17PNEE115 pKa = 3.9QTGISPARR123 pKa = 11.84AHH125 pKa = 5.74VAAANLVTAYY135 pKa = 9.0EE136 pKa = 4.04QTVKK140 pKa = 10.49QEE142 pKa = 4.4RR143 pKa = 11.84NFQKK147 pKa = 10.59SFNNHH152 pKa = 3.71VRR154 pKa = 11.84TLIARR159 pKa = 11.84EE160 pKa = 4.02EE161 pKa = 4.21VALGLMHH168 pKa = 7.41LWDD171 pKa = 3.96LAEE174 pKa = 5.92AIVQNPDD181 pKa = 3.41SKK183 pKa = 11.15PLTAQLFLVVQHH195 pKa = 6.48SRR197 pKa = 11.84DD198 pKa = 3.36NEE200 pKa = 3.99AFRR203 pKa = 11.84EE204 pKa = 4.03ALLNIAEE211 pKa = 4.33PEE213 pKa = 4.24GRR215 pKa = 11.84WLLEE219 pKa = 4.86LINILQSIVVQEE231 pKa = 4.36RR232 pKa = 11.84SLSLAEE238 pKa = 4.47KK239 pKa = 10.11VAAINYY245 pKa = 9.0SVLSLGKK252 pKa = 9.39FYY254 pKa = 11.12ARR256 pKa = 11.84KK257 pKa = 9.39IYY259 pKa = 7.63KK260 pKa = 8.73TPYY263 pKa = 8.86VPIDD267 pKa = 3.65KK268 pKa = 9.91EE269 pKa = 4.28VKK271 pKa = 9.4IDD273 pKa = 3.6SFYY276 pKa = 10.94MRR278 pKa = 11.84MALKK282 pKa = 10.67VLTLSDD288 pKa = 3.71DD289 pKa = 3.79LGVYY293 pKa = 10.56RR294 pKa = 11.84NDD296 pKa = 4.41RR297 pKa = 11.84IHH299 pKa = 6.67KK300 pKa = 9.47AVSASRR306 pKa = 11.84RR307 pKa = 11.84RR308 pKa = 11.84EE309 pKa = 3.75LSDD312 pKa = 3.68RR313 pKa = 11.84EE314 pKa = 4.15LMLSLRR320 pKa = 11.84RR321 pKa = 11.84ALVGGAAGGEE331 pKa = 3.78EE332 pKa = 5.21SYY334 pKa = 11.63FDD336 pKa = 4.05MGADD340 pKa = 3.61LHH342 pKa = 5.83WQPSRR347 pKa = 11.84RR348 pKa = 11.84ALEE351 pKa = 3.94AAYY354 pKa = 10.02GPEE357 pKa = 4.18DD358 pKa = 3.77LDD360 pKa = 3.74EE361 pKa = 4.65EE362 pKa = 4.49EE363 pKa = 5.14EE364 pKa = 4.29EE365 pKa = 5.12EE366 pKa = 4.28EE367 pKa = 4.16DD368 pKa = 4.86APAAGYY374 pKa = 10.02

Molecular weight: 42.19 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|Q9WF18|Q9WF18_ADE17 Isoform of Q9WF19 Pre-protein VI OS=Human adenovirus D serotype 17 OX=46922 GN=L3 PE=2 SV=1
MM1 pKa = 7.8EE2 pKa = 6.49DD3 pKa = 3.25INFASLAPRR12 pKa = 11.84HH13 pKa = 5.03GTRR16 pKa = 11.84PFMGTWNEE24 pKa = 3.89IGTSQLNGGAFNWSSVWSGLKK45 pKa = 10.58NFGSTLRR52 pKa = 11.84TYY54 pKa = 11.16GNKK57 pKa = 9.37AWNSSTGQLLRR68 pKa = 11.84EE69 pKa = 4.1KK70 pKa = 10.86LKK72 pKa = 10.96DD73 pKa = 3.29QNFQQKK79 pKa = 9.05VVDD82 pKa = 4.39GLASGINGVVDD93 pKa = 3.77IANQAVQRR101 pKa = 11.84EE102 pKa = 4.58INSRR106 pKa = 11.84LDD108 pKa = 3.31PRR110 pKa = 11.84PPTVVEE116 pKa = 4.43MEE118 pKa = 4.73DD119 pKa = 3.33ATLPPPKK126 pKa = 10.05GEE128 pKa = 3.9KK129 pKa = 9.84RR130 pKa = 11.84PRR132 pKa = 11.84PDD134 pKa = 3.14AEE136 pKa = 4.04EE137 pKa = 4.59TILQVDD143 pKa = 4.62EE144 pKa = 4.54PPSYY148 pKa = 11.1EE149 pKa = 4.14EE150 pKa = 3.88AVKK153 pKa = 10.86AGMPTTRR160 pKa = 11.84IIAPLATGVMKK171 pKa = 10.09PATLDD176 pKa = 3.54LPPPPTPAPPKK187 pKa = 9.6AAPVVQPPPVATAVRR202 pKa = 11.84RR203 pKa = 11.84VPARR207 pKa = 11.84RR208 pKa = 11.84QAQNWQSTLHH218 pKa = 6.39SIVGLGVKK226 pKa = 8.75SLKK229 pKa = 9.96RR230 pKa = 11.84RR231 pKa = 11.84RR232 pKa = 11.84CYY234 pKa = 10.71

Molecular weight: 25.54 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

7

1

8

3971

209

1091

496.4

56.15

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

8.26 ± 0.645

1.158 ± 0.36

5.767 ± 0.228

6.673 ± 0.679

4.155 ± 0.366

5.54 ± 0.447

1.989 ± 0.381

3.526 ± 0.219

3.651 ± 0.861

9.872 ± 0.364

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.392 ± 0.217

4.382 ± 0.517

6.799 ± 0.378

4.231 ± 0.512

7.958 ± 0.942

6.422 ± 0.554

5.465 ± 0.517

6.724 ± 0.388

1.461 ± 0.187

3.576 ± 0.359
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski