Aspergillus saccharolyticus JOP 1030-1
Average proteome isoelectric point is 6.53
Get precalculated fractions of proteins
Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
All
Note: above files contain also dissociation constants (pKa)
Virtual 2D-PAGE plot for 10061 proteins (isoelectric point calculated using IPC2_protein)
Get csv file with sequences according to given criteria:
* You can choose from 21 different methods for calculating isoelectric point
Summary statistics related to proteome-wise predictions
Protein with the lowest isoelectric point:
>tr|A0A319ACF1|A0A319ACF1_9EURO Uncharacterized protein OS=Aspergillus saccharolyticus JOP 1030-1 OX=1450539 GN=BP01DRAFT_388382 PE=4 SV=1
MM1 pKa = 7.11 VRR3 pKa = 11.84 QLALACGLLAAVAVQAAPAEE23 pKa = 4.41 PAHH26 pKa = 6.16 PMVTEE31 pKa = 4.51 APDD34 pKa = 3.27 ASLLHH39 pKa = 6.49 KK40 pKa = 10.48 RR41 pKa = 11.84 ATTCTFSGSEE51 pKa = 4.19 GASKK55 pKa = 10.64 VSKK58 pKa = 10.85 SKK60 pKa = 9.78 TDD62 pKa = 2.91 CSTIYY67 pKa = 10.59 LSALAVPSGTTLDD80 pKa = 4.91 LKK82 pKa = 10.98 DD83 pKa = 5.0 LNDD86 pKa = 3.71 GTHH89 pKa = 6.5 VIFEE93 pKa = 4.49 GEE95 pKa = 4.12 TTFGYY100 pKa = 10.01 EE101 pKa = 3.67 EE102 pKa = 4.39 WEE104 pKa = 4.59 GPLVSVSGTDD114 pKa = 3.1 ITVEE118 pKa = 4.17 GASGAVLNGDD128 pKa = 4.21 GSRR131 pKa = 11.84 WWDD134 pKa = 3.48 GEE136 pKa = 3.94 GSDD139 pKa = 5.38 GGKK142 pKa = 8.39 TKK144 pKa = 10.66 PKK146 pKa = 10.23 FFAAHH151 pKa = 7.33 DD152 pKa = 4.23 LTSSTIKK159 pKa = 10.41 SIYY162 pKa = 9.57 IEE164 pKa = 4.05 NSPVQVFSIDD174 pKa = 3.15 GSTDD178 pKa = 2.92 LTMTDD183 pKa = 2.82 ITIDD187 pKa = 3.65 NTDD190 pKa = 3.45 GDD192 pKa = 4.42 TDD194 pKa = 4.09 DD195 pKa = 5.53 LAANTDD201 pKa = 3.28 GFDD204 pKa = 3.25 IGEE207 pKa = 4.38 STDD210 pKa = 3.19 ITITGATVYY219 pKa = 10.89 NQDD222 pKa = 3.35 DD223 pKa = 3.99 CVAINSGEE231 pKa = 4.14 NIYY234 pKa = 10.35 FAAGVCSGGHH244 pKa = 5.63 GLSIGSVGGRR254 pKa = 11.84 DD255 pKa = 3.68 DD256 pKa = 3.79 NTVKK260 pKa = 10.76 NVTFYY265 pKa = 11.32 DD266 pKa = 3.84 VNVLKK271 pKa = 10.54 SQQAIRR277 pKa = 11.84 IKK279 pKa = 10.53 AIYY282 pKa = 9.49 GDD284 pKa = 3.76 TGSISDD290 pKa = 3.48 ITYY293 pKa = 10.53 HH294 pKa = 6.92 EE295 pKa = 4.44 IAFSDD300 pKa = 3.41 ATDD303 pKa = 3.42 YY304 pKa = 11.77 GIVVEE309 pKa = 4.53 QNYY312 pKa = 10.88 DD313 pKa = 3.64 DD314 pKa = 3.92 TSKK317 pKa = 9.89 TPTTGIPITDD327 pKa = 4.11 FTLEE331 pKa = 4.32 TIIGTCADD339 pKa = 4.59 DD340 pKa = 4.66 DD341 pKa = 4.05 CTDD344 pKa = 3.21 IYY346 pKa = 10.48 IACGSGACSDD356 pKa = 3.8 WSWSGVSVTGGKK368 pKa = 10.1 VSTDD372 pKa = 3.51 CLNVPSGISCDD383 pKa = 3.58 LL384 pKa = 3.82
Molecular weight: 40.01 kDa
Isoelectric point according different methods:
IPC2.protein.svr19 3.721
IPC2_protein 3.884
IPC_protein 3.923
Toseland 3.694
ProMoST 4.088
Dawson 3.923
Bjellqvist 4.075
Wikipedia 3.859
Rodwell 3.745
Grimsley 3.592
Solomon 3.91
Lehninger 3.872
Nozaki 4.024
DTASelect 4.304
Thurlkill 3.745
EMBOSS 3.872
Sillero 4.037
Patrickios 1.1
IPC_peptide 3.91
IPC2_peptide 4.012
IPC2.peptide.svr19 3.914
Protein with the highest isoelectric point:
>tr|A0A318Z116|A0A318Z116_9EURO Serine/threonine-protein kinase bur1 OS=Aspergillus saccharolyticus JOP 1030-1 OX=1450539 GN=BP01DRAFT_361075 PE=4 SV=1
MM1 pKa = 7.88 PSHH4 pKa = 6.91 KK5 pKa = 10.39 SFRR8 pKa = 11.84 TKK10 pKa = 10.45 QKK12 pKa = 9.54 LAKK15 pKa = 9.74 AQRR18 pKa = 11.84 QNRR21 pKa = 11.84 PIPQWIRR28 pKa = 11.84 LRR30 pKa = 11.84 TGNTIRR36 pKa = 11.84 YY37 pKa = 5.79 NAKK40 pKa = 8.89 RR41 pKa = 11.84 RR42 pKa = 11.84 HH43 pKa = 4.14 WRR45 pKa = 11.84 KK46 pKa = 7.41 TRR48 pKa = 11.84 LGII51 pKa = 4.46
Molecular weight: 6.28 kDa
Isoelectric point according different methods:
IPC2.protein.svr19 9.413
IPC2_protein 11.096
IPC_protein 12.457
Toseland 12.618
ProMoST 13.1
Dawson 12.618
Bjellqvist 12.603
Wikipedia 13.086
Rodwell 12.34
Grimsley 12.661
Solomon 13.1
Lehninger 13.013
Nozaki 12.618
DTASelect 12.603
Thurlkill 12.618
EMBOSS 13.115
Sillero 12.618
Patrickios 12.076
IPC_peptide 13.115
IPC2_peptide 12.091
IPC2.peptide.svr19 9.034
Peptides (in silico digests for buttom-up proteomics)
Below you can find
in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.
Try ESI
ChTry ESI
ArgC ESI
LysN ESI
TryLysC ESI
Try MALDI
ChTry MALDI
ArgC MALDI
LysN MALDI
TryLysC MALDI
Try LTQ
ChTry LTQ
ArgC LTQ
LysN LTQ
TryLysC LTQ
Try MSlow
ChTry MSlow
ArgC MSlow
LysN MSlow
TryLysC MSlow
Try MShigh
ChTry MShigh
ArgC MShigh
LysN MShigh
TryLysC MShigh
General Statistics
Number of major isoforms
Number of additional isoforms
Number of all proteins
Number of amino acids
Min. Seq. Length
Max. Seq. Length
Avg. Seq. Length
Avg. Mol. Weight
10061
0
10061
4793634
49
6402
476.5
52.7
Amino acid frequency
Ala
Cys
Asp
Glu
Phe
Gly
His
Ile
Lys
Leu
8.857 ± 0.023
1.277 ± 0.011
5.476 ± 0.019
6.115 ± 0.025
3.66 ± 0.017
6.725 ± 0.021
2.529 ± 0.011
4.764 ± 0.018
4.287 ± 0.022
9.236 ± 0.03
Met
Asn
Gln
Pro
Arg
Ser
Thr
Val
Trp
Tyr
2.105 ± 0.009
3.432 ± 0.011
6.101 ± 0.024
4.131 ± 0.015
6.325 ± 0.022
8.357 ± 0.031
6.124 ± 0.018
6.21 ± 0.019
1.461 ± 0.01
2.827 ± 0.014
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level
Most of the basic statistics you can see at this page can be downloaded from this CSV file
For dipeptide frequency statistics click here