Sporanaerobacter acetigenes DSM 13106

Taxonomy: cellular organisms; Bacteria; Terrabacteria group; Firmicutes; Tissierellia; Tissierellales; Tissierellaceae; Sporanaerobacter; Sporanaerobacter acetigenes

Average proteome isoelectric point is 6.16

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 2836 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A1M5WS51|A0A1M5WS51_9FIRM ATPase components of ABC transporters with duplicated ATPase domains OS=Sporanaerobacter acetigenes DSM 13106 OX=1123281 GN=SAMN02745180_01371 PE=4 SV=1
MM1 pKa = 7.54TEE3 pKa = 4.38DD4 pKa = 4.76LNVSSPQKK12 pKa = 10.37RR13 pKa = 11.84GLFDD17 pKa = 3.26ILGGGDD23 pKa = 3.72SEE25 pKa = 4.37NLLFFFLLLVVFFSNCGYY43 pKa = 10.98GDD45 pKa = 4.03RR46 pKa = 11.84DD47 pKa = 3.85DD48 pKa = 6.0DD49 pKa = 3.98SLLFFFLLLVVLFCYY64 pKa = 10.49CC65 pKa = 4.21

Molecular weight: 7.4 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A1M5XZL6|A0A1M5XZL6_9FIRM Hook-length control protein FliK OS=Sporanaerobacter acetigenes DSM 13106 OX=1123281 GN=SAMN02745180_01926 PE=4 SV=1
MM1 pKa = 7.7AKK3 pKa = 10.11YY4 pKa = 10.61CEE6 pKa = 3.97ICGKK10 pKa = 10.53GKK12 pKa = 10.84VYY14 pKa = 10.69GNQVTFSNKK23 pKa = 9.29KK24 pKa = 9.84NNRR27 pKa = 11.84TWAPNVRR34 pKa = 11.84RR35 pKa = 11.84VKK37 pKa = 10.7AIVDD41 pKa = 3.98GSPKK45 pKa = 10.06RR46 pKa = 11.84IYY48 pKa = 10.82VCTRR52 pKa = 11.84CLRR55 pKa = 11.84SGNVTRR61 pKa = 11.84ALL63 pKa = 3.61

Molecular weight: 7.12 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

2836

0

2836

879205

40

2831

310.0

35.13

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

5.227 ± 0.045

0.987 ± 0.017

5.855 ± 0.033

8.283 ± 0.055

4.316 ± 0.033

6.644 ± 0.044

1.328 ± 0.015

9.931 ± 0.052

8.947 ± 0.048

8.947 ± 0.038

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.731 ± 0.019

5.843 ± 0.039

3.004 ± 0.029

2.244 ± 0.02

3.625 ± 0.029

5.925 ± 0.033

4.707 ± 0.03

6.529 ± 0.037

0.693 ± 0.015

4.234 ± 0.033
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski