Altererythrobacter atlanticus

Taxonomy: cellular organisms; Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Croceibacterium

Average proteome isoelectric point is 6.01

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 3254 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A0F7KYP6|A0A0F7KYP6_9SPHN Aryl-alcohol dehydrogenase OS=Altererythrobacter atlanticus OX=1267766 GN=xylB_3 PE=3 SV=1
MM1 pKa = 7.72VDD3 pKa = 3.91DD4 pKa = 5.4PLPAGISSASWTCGGATGGGACGQASGSGAISGRR38 pKa = 11.84TVDD41 pKa = 4.28LPVGASVTFSMTLQIPAGYY60 pKa = 10.18SGDD63 pKa = 3.64LTNIATVTAPGTALEE78 pKa = 4.37TDD80 pKa = 4.01LTNNSATDD88 pKa = 3.09VDD90 pKa = 3.94AGVVVTKK97 pKa = 9.24TLIGEE102 pKa = 4.27NGVLANLAEE111 pKa = 4.84PGEE114 pKa = 4.02QLTYY118 pKa = 10.81RR119 pKa = 11.84ITVTNNGSVAVSGYY133 pKa = 10.91DD134 pKa = 4.25VIDD137 pKa = 3.62TLDD140 pKa = 4.11PNTSLVMATGGGILNGSNVEE160 pKa = 4.01WTNLSIPPGGSLSVLLMTRR179 pKa = 11.84IDD181 pKa = 4.4DD182 pKa = 4.59PLPSTLTRR190 pKa = 11.84ITNIARR196 pKa = 11.84HH197 pKa = 6.35PDD199 pKa = 3.56GPVPSCPSGQCVVTPVAPAVTYY221 pKa = 10.5AKK223 pKa = 9.6STTATNAAVGDD234 pKa = 4.23VITYY238 pKa = 7.82TLTARR243 pKa = 11.84VFHH246 pKa = 6.93SPTTDD251 pKa = 3.63DD252 pKa = 3.95LTLTDD257 pKa = 4.1TLGSGLDD264 pKa = 3.77FTAVTNAGAFTCTPGSPLVCTLPSGTAVGTYY295 pKa = 10.31SLAYY299 pKa = 7.69TATVNASATGSVTNAVVGTGGDD321 pKa = 3.82DD322 pKa = 3.76PSCSGTCDD330 pKa = 2.96TDD332 pKa = 3.98TPVVAPDD339 pKa = 3.13VTFAKK344 pKa = 10.53SADD347 pKa = 3.54TAGPVSTGDD356 pKa = 3.36IITFTLTTTITNSLITSDD374 pKa = 4.07IVLLTDD380 pKa = 3.47TLGTGLDD387 pKa = 3.96FTAVTDD393 pKa = 3.76AGIYY397 pKa = 10.49GVDD400 pKa = 3.43STGDD404 pKa = 3.5PVIEE408 pKa = 4.26FTLPAGTGPGSYY420 pKa = 9.65SVSYY424 pKa = 8.6TAIVAPDD431 pKa = 3.37ATGSVSNVVVGSGPDD446 pKa = 3.3NPTCTTACGTEE457 pKa = 4.16TTVADD462 pKa = 3.74PVVTYY467 pKa = 9.67GKK469 pKa = 10.11SVSAPGATVAVGDD482 pKa = 3.97VLDD485 pKa = 3.94YY486 pKa = 10.25TLSVTVANSPTTGIVTLTDD505 pKa = 3.45TLGTGLDD512 pKa = 3.96FTAVTDD518 pKa = 4.34AGVFTCNAANPLICTLAAGTPVGTYY543 pKa = 11.27DD544 pKa = 3.22MTYY547 pKa = 9.24TATVNDD553 pKa = 4.6DD554 pKa = 3.3ATGSVTNAVVGTGDD568 pKa = 5.3DD569 pKa = 5.07DD570 pKa = 4.72PGCDD574 pKa = 3.9GTCDD578 pKa = 3.13TATNVTPSQVTYY590 pKa = 10.85AKK592 pKa = 9.18STSATNVSVGDD603 pKa = 4.06TITYY607 pKa = 7.65TLSATVTNSQTTDD620 pKa = 3.43DD621 pKa = 4.2LTLTDD626 pKa = 3.87TLGTGLDD633 pKa = 3.93FGSVTNAGVFTCTPGNPLSCTLPAGTAVGTYY664 pKa = 10.14SLAYY668 pKa = 7.88TATVNAAATGSVTNAVLGTGGDD690 pKa = 3.95DD691 pKa = 3.72PACLGSCDD699 pKa = 3.3TTTTVDD705 pKa = 3.78EE706 pKa = 4.56PAVAYY711 pKa = 10.33AKK713 pKa = 10.47FADD716 pKa = 3.82TAGPVSAGDD725 pKa = 3.65VITFTLRR732 pKa = 11.84TTIANSMTTSDD743 pKa = 4.09IVLLTDD749 pKa = 3.38TLGAGLDD756 pKa = 3.99FTAVTDD762 pKa = 4.11AGAYY766 pKa = 9.86GVDD769 pKa = 3.29ASGAPVVEE777 pKa = 4.81FTLPAGTGPGTYY789 pKa = 9.91DD790 pKa = 3.07AVYY793 pKa = 8.63TATVTADD800 pKa = 2.95ASGAVSNAVVGTGGDD815 pKa = 3.67DD816 pKa = 3.57ATCSGDD822 pKa = 3.61CDD824 pKa = 3.73TDD826 pKa = 3.69TSVVAPGVTYY836 pKa = 10.93AKK838 pKa = 9.15TASTAGPVSAGDD850 pKa = 3.58VITYY854 pKa = 7.7TISTIVANSQTTGDD868 pKa = 3.7VVLADD873 pKa = 3.94TLGSGLDD880 pKa = 3.79FTAVTDD886 pKa = 4.11AGAYY890 pKa = 9.86GVDD893 pKa = 3.29ASGAPVVEE901 pKa = 4.81FTLPAGTAPGTYY913 pKa = 8.74EE914 pKa = 3.67VSYY917 pKa = 9.07TATVNGSASGSVSNAVVGTGDD938 pKa = 5.02DD939 pKa = 5.18DD940 pKa = 3.95PTCTVNCGTQTAVEE954 pKa = 4.88DD955 pKa = 3.75PTVTYY960 pKa = 9.59TLSATVANAATNNVLTLTDD979 pKa = 3.65TLGTGLDD986 pKa = 3.96FGSVTDD992 pKa = 5.29AGAFTCTPGNPLVCTLPAGTAPGTYY1017 pKa = 10.05SLTYY1021 pKa = 9.15NAEE1024 pKa = 4.16VNASATGSVNNAVLGTGGDD1043 pKa = 4.01DD1044 pKa = 3.64PACLGDD1050 pKa = 4.44CNIDD1054 pKa = 3.64TPVIAPAVSYY1064 pKa = 11.3AKK1066 pKa = 9.4TASTAGPVSVGDD1078 pKa = 3.87VISFTLTTTIANSMTTSDD1096 pKa = 5.19LVLLTDD1102 pKa = 3.76TLGTGLDD1109 pKa = 3.96FTAVTDD1115 pKa = 4.11AGAYY1119 pKa = 9.86GVDD1122 pKa = 3.29ASGAPVVRR1130 pKa = 11.84FTLPAGTGPGSYY1142 pKa = 10.4AVTYY1146 pKa = 7.51TATVNGSASGSVSNVVVGSGGDD1168 pKa = 3.58NPVCTVNCGTEE1179 pKa = 4.18TTVEE1183 pKa = 4.3DD1184 pKa = 3.72STVTYY1189 pKa = 10.37SKK1191 pKa = 10.73SSSAAQVQVGDD1202 pKa = 4.39SISYY1206 pKa = 8.88TLTATVGNSALTDD1219 pKa = 3.72ALTLTDD1225 pKa = 3.77TLGTGLDD1232 pKa = 4.1FVAITDD1238 pKa = 3.83AGVFTCTPGNPLVCTLPAGTAPGTYY1263 pKa = 10.01SLAYY1267 pKa = 7.89TATVNAAAGGSVTNAVLGTGGDD1289 pKa = 4.01DD1290 pKa = 3.64PACLGDD1296 pKa = 5.45CITEE1300 pKa = 4.22NPVAAPVISIAKK1312 pKa = 8.85TSDD1315 pKa = 3.09PAAGEE1320 pKa = 4.29TVQVGQTVNYY1330 pKa = 10.3ALVATIANGAITAPLVLVDD1349 pKa = 4.34TPDD1352 pKa = 4.1PGLTITDD1359 pKa = 3.63IPAGCEE1365 pKa = 3.56MAGGIITCTLPAGTPAGTHH1384 pKa = 5.11SLAYY1388 pKa = 9.98GATINDD1394 pKa = 3.73SAGDD1398 pKa = 3.53AVRR1401 pKa = 11.84NVVTATGGGGTTEE1414 pKa = 4.6PGCNSCATEE1423 pKa = 4.24HH1424 pKa = 6.46NVALPLIRR1432 pKa = 11.84LAKK1435 pKa = 7.54TAAVRR1440 pKa = 11.84EE1441 pKa = 4.1VRR1443 pKa = 11.84IGDD1446 pKa = 3.88LVRR1449 pKa = 11.84YY1450 pKa = 6.56TLSIEE1455 pKa = 4.32NVGEE1459 pKa = 3.77RR1460 pKa = 11.84DD1461 pKa = 3.82LIGGSIMDD1469 pKa = 4.18MPPAGFTYY1477 pKa = 10.77VEE1479 pKa = 4.61GSLQVVDD1486 pKa = 4.49GDD1488 pKa = 3.9NAATLSGQGPLRR1500 pKa = 11.84FGEE1503 pKa = 3.81IDD1505 pKa = 3.34VRR1507 pKa = 11.84AGEE1510 pKa = 4.38TATLAYY1516 pKa = 10.23LMRR1519 pKa = 11.84VGAGVRR1525 pKa = 11.84PGTHH1529 pKa = 5.7VNQAQAYY1536 pKa = 7.89SAEE1539 pKa = 4.45DD1540 pKa = 3.48VSVSNPATARR1550 pKa = 11.84VEE1552 pKa = 4.04LAGDD1556 pKa = 3.73PLVDD1560 pKa = 3.31EE1561 pKa = 4.49TLIFGTLFDD1570 pKa = 5.76DD1571 pKa = 4.6RR1572 pKa = 11.84DD1573 pKa = 3.48GDD1575 pKa = 3.78GWQDD1579 pKa = 3.18SAALSGLHH1587 pKa = 5.39VRR1589 pKa = 11.84GGFAPGAYY1597 pKa = 9.97VPGSTMIDD1605 pKa = 3.12RR1606 pKa = 11.84GQGMVPVPDD1615 pKa = 4.13ASAPLLHH1622 pKa = 6.92GMDD1625 pKa = 4.16LGGIAARR1632 pKa = 11.84QSEE1635 pKa = 4.58ADD1637 pKa = 3.19PAGRR1641 pKa = 11.84NRR1643 pKa = 11.84IVIRR1647 pKa = 11.84QRR1649 pKa = 11.84LTDD1652 pKa = 3.56AAFTDD1657 pKa = 4.73DD1658 pKa = 6.15FILTSAQGVTIRR1670 pKa = 11.84MDD1672 pKa = 3.21AQGRR1676 pKa = 11.84TSVEE1680 pKa = 4.0KK1681 pKa = 11.04GGDD1684 pKa = 3.27AAKK1687 pKa = 10.35GLNGAEE1693 pKa = 3.81PRR1695 pKa = 11.84VEE1697 pKa = 3.77RR1698 pKa = 11.84RR1699 pKa = 11.84IAQGEE1704 pKa = 4.33GGHH1707 pKa = 5.61VVDD1710 pKa = 6.06YY1711 pKa = 11.14VIEE1714 pKa = 4.19NDD1716 pKa = 4.62GIDD1719 pKa = 3.45EE1720 pKa = 4.3RR1721 pKa = 11.84GIPGVRR1727 pKa = 11.84IASVEE1732 pKa = 4.06GLVMEE1737 pKa = 4.67TDD1739 pKa = 3.18QFGRR1743 pKa = 11.84YY1744 pKa = 8.52HH1745 pKa = 6.86LAAVPGGAWARR1756 pKa = 11.84GRR1758 pKa = 11.84NFILKK1763 pKa = 9.42VDD1765 pKa = 4.44PSTLPDD1771 pKa = 3.53GAEE1774 pKa = 3.94FTTDD1778 pKa = 2.97NPLLRR1783 pKa = 11.84RR1784 pKa = 11.84ITPGIPVRR1792 pKa = 11.84FDD1794 pKa = 2.94WGVKK1798 pKa = 9.85LPPALVEE1805 pKa = 4.23GRR1807 pKa = 11.84TEE1809 pKa = 4.15TVEE1812 pKa = 4.62LEE1814 pKa = 3.82LGQAIFTPGSAEE1826 pKa = 3.34IRR1828 pKa = 11.84AEE1830 pKa = 3.9YY1831 pKa = 10.36LPAIDD1836 pKa = 5.45RR1837 pKa = 11.84MAAEE1841 pKa = 3.97IGKK1844 pKa = 8.52YY1845 pKa = 8.96QGGEE1849 pKa = 3.72IVIEE1853 pKa = 4.16ANGEE1857 pKa = 4.05NASLAFDD1864 pKa = 3.42RR1865 pKa = 11.84AEE1867 pKa = 3.9AVKK1870 pKa = 9.9TILLRR1875 pKa = 11.84KK1876 pKa = 9.6LDD1878 pKa = 3.77TASARR1883 pKa = 11.84NLAITARR1890 pKa = 11.84GRR1892 pKa = 11.84VDD1894 pKa = 4.44DD1895 pKa = 4.79PSSLIAGVDD1904 pKa = 3.34EE1905 pKa = 5.05GGVLLGTVLFDD1916 pKa = 3.52TDD1918 pKa = 3.47SAQIRR1923 pKa = 11.84PEE1925 pKa = 3.79FAPLLGRR1932 pKa = 11.84VAARR1936 pKa = 11.84LARR1939 pKa = 11.84EE1940 pKa = 4.1GGGAVAIIGHH1950 pKa = 5.65TDD1952 pKa = 2.96LRR1954 pKa = 11.84GSFQYY1959 pKa = 9.24NTALGMRR1966 pKa = 11.84RR1967 pKa = 11.84ARR1969 pKa = 11.84AVYY1972 pKa = 9.15EE1973 pKa = 3.98ALASQLPPDD1982 pKa = 3.49IRR1984 pKa = 11.84AKK1986 pKa = 10.4IRR1988 pKa = 11.84VDD1990 pKa = 3.37SSEE1993 pKa = 5.12DD1994 pKa = 3.16PAAPADD2000 pKa = 4.03GQAGG2004 pKa = 3.5

Molecular weight: 200.14 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A0F7KQA1|A0A0F7KQA1_9SPHN Tyrosine recombinase XerC OS=Altererythrobacter atlanticus OX=1267766 GN=xerC_2 PE=4 SV=1
MM1 pKa = 7.45KK2 pKa = 9.61RR3 pKa = 11.84TFQPSNLVRR12 pKa = 11.84KK13 pKa = 9.24RR14 pKa = 11.84RR15 pKa = 11.84HH16 pKa = 4.93GFFARR21 pKa = 11.84KK22 pKa = 7.42ATPGGRR28 pKa = 11.84KK29 pKa = 8.0VLRR32 pKa = 11.84ARR34 pKa = 11.84RR35 pKa = 11.84ARR37 pKa = 11.84GRR39 pKa = 11.84KK40 pKa = 9.02KK41 pKa = 10.61LSAA44 pKa = 4.03

Molecular weight: 5.15 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

3254

0

3254

1052863

29

2739

323.6

35.15

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

12.349 ± 0.062

0.829 ± 0.012

6.048 ± 0.03

6.418 ± 0.039

3.679 ± 0.027

8.911 ± 0.044

1.939 ± 0.023

5.156 ± 0.027

2.953 ± 0.034

9.887 ± 0.051

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.551 ± 0.022

2.68 ± 0.027

5.312 ± 0.031

3.266 ± 0.022

7.157 ± 0.044

5.44 ± 0.032

4.941 ± 0.034

6.806 ± 0.036

1.444 ± 0.017

2.232 ± 0.026
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski