Equus caballus papillomavirus 5

Taxonomy: Viruses; Monodnaviria; Shotokuvirae; Cossaviricota; Papovaviricetes; Zurhausenvirales; Papillomaviridae; Firstpapillomavirinae; Dyoiotapapillomavirus; Dyoiotapapillomavirus 2

Average proteome isoelectric point is 6.69

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 7 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|K9M8U7|K9M8U7_9PAPI E4 OS=Equus caballus papillomavirus 5 OX=1235429 PE=4 SV=1
MM1 pKa = 8.06DD2 pKa = 5.48APPVKK7 pKa = 9.69RR8 pKa = 11.84RR9 pKa = 11.84KK10 pKa = 9.37RR11 pKa = 11.84AAVDD15 pKa = 3.33QLYY18 pKa = 7.79KK19 pKa = 7.73TCKK22 pKa = 9.48MGGDD26 pKa = 4.21CPPDD30 pKa = 3.34VVPKK34 pKa = 10.91VEE36 pKa = 4.28GDD38 pKa = 3.71TVADD42 pKa = 6.04RR43 pKa = 11.84ILKK46 pKa = 8.42WLSSFFYY53 pKa = 10.43FGNLGISTGRR63 pKa = 11.84GTGGRR68 pKa = 11.84LGYY71 pKa = 8.94TPLGGGGGHH80 pKa = 6.55AAEE83 pKa = 4.93GGGVRR88 pKa = 11.84VGAPISTLGVGVDD101 pKa = 3.56AVGPAEE107 pKa = 4.25AVPVDD112 pKa = 3.9VLQPSAPSIIPLGEE126 pKa = 4.12GVSVDD131 pKa = 3.64TVDD134 pKa = 4.68VIAEE138 pKa = 4.07VLPPPGGARR147 pKa = 11.84PEE149 pKa = 4.11VTAEE153 pKa = 4.16VPGQPATIDD162 pKa = 3.26VAMDD166 pKa = 3.07VVPRR170 pKa = 11.84LRR172 pKa = 11.84AAVSRR177 pKa = 11.84STFHH181 pKa = 6.67NPAFQVEE188 pKa = 4.43LQSLGTGEE196 pKa = 4.44SSASEE201 pKa = 3.65QAFVFGHH208 pKa = 5.8AGGRR212 pKa = 11.84LVDD215 pKa = 3.89TVGEE219 pKa = 4.49DD220 pKa = 3.21IEE222 pKa = 4.65MVALGDD228 pKa = 3.84GVPRR232 pKa = 11.84TSTPRR237 pKa = 11.84SSSATPRR244 pKa = 11.84SRR246 pKa = 11.84LWGRR250 pKa = 11.84RR251 pKa = 11.84FEE253 pKa = 4.26QVQVADD259 pKa = 4.18PAFLSAPDD267 pKa = 3.71TLVQYY272 pKa = 10.23GFSNPAYY279 pKa = 9.95DD280 pKa = 4.17PEE282 pKa = 6.07ASLVFPYY289 pKa = 10.61TEE291 pKa = 4.32GEE293 pKa = 3.81ARR295 pKa = 11.84AAPSTLFQDD304 pKa = 3.47VAYY307 pKa = 10.42LGRR310 pKa = 11.84PEE312 pKa = 3.97ITSHH316 pKa = 6.45KK317 pKa = 9.85EE318 pKa = 3.71SIGVSRR324 pKa = 11.84LGRR327 pKa = 11.84RR328 pKa = 11.84ATVQTRR334 pKa = 11.84SGTIIGAEE342 pKa = 3.65VHH344 pKa = 6.25FRR346 pKa = 11.84YY347 pKa = 9.68EE348 pKa = 4.04LSPITSEE355 pKa = 5.02DD356 pKa = 3.23IEE358 pKa = 4.92LSVLTTQDD366 pKa = 3.22EE367 pKa = 4.51EE368 pKa = 4.36ALSVVDD374 pKa = 5.88LEE376 pKa = 4.96SLTSAYY382 pKa = 9.65SEE384 pKa = 4.42RR385 pKa = 11.84EE386 pKa = 4.06LLEE389 pKa = 5.27DD390 pKa = 4.29DD391 pKa = 3.84QPNIHH396 pKa = 6.36GVLSFTDD403 pKa = 3.62EE404 pKa = 4.2EE405 pKa = 5.08GATTSLPLAPPQARR419 pKa = 11.84FFYY422 pKa = 10.15TGPFLQGGRR431 pKa = 11.84GVSDD435 pKa = 3.42GRR437 pKa = 11.84GQAAGEE443 pKa = 4.24SSHH446 pKa = 7.22PGTDD450 pKa = 3.45VIIEE454 pKa = 4.05YY455 pKa = 10.06PEE457 pKa = 5.0AGGSYY462 pKa = 9.76FLHH465 pKa = 6.37PTAPCRR471 pKa = 11.84RR472 pKa = 11.84KK473 pKa = 9.94RR474 pKa = 11.84RR475 pKa = 11.84YY476 pKa = 9.9CFADD480 pKa = 3.62GLLDD484 pKa = 4.31AGQSEE489 pKa = 5.1VLSPPCACYY498 pKa = 10.36

Molecular weight: 52.51 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|K9M934|K9M934_9PAPI E7 OS=Equus caballus papillomavirus 5 OX=1235429 PE=4 SV=1
MM1 pKa = 7.36KK2 pKa = 9.89PSPPLLSPAQVVVTARR18 pKa = 11.84KK19 pKa = 9.54EE20 pKa = 3.92EE21 pKa = 4.25AGTDD25 pKa = 3.67QTDD28 pKa = 3.49SAATQAQGGLAQFPEE43 pKa = 4.33TLVDD47 pKa = 3.58YY48 pKa = 10.46LKK50 pKa = 10.86RR51 pKa = 11.84NHH53 pKa = 6.25LTGADD58 pKa = 3.21VWPRR62 pKa = 11.84QSGCLLNSRR71 pKa = 11.84GKK73 pKa = 10.55ALLQCMTAGTAEE85 pKa = 4.18EE86 pKa = 4.63APLAVTPSLASEE98 pKa = 3.78ARR100 pKa = 11.84GYY102 pKa = 9.87WEE104 pKa = 5.05IPPPPAPCRR113 pKa = 11.84ARR115 pKa = 11.84MRR117 pKa = 11.84RR118 pKa = 11.84TRR120 pKa = 11.84LAHH123 pKa = 5.66RR124 pKa = 11.84QRR126 pKa = 11.84LKK128 pKa = 8.98QTLWHH133 pKa = 6.3LQRR136 pKa = 11.84EE137 pKa = 4.62LSEE140 pKa = 3.8LMYY143 pKa = 10.74WMDD146 pKa = 3.92VGILL150 pKa = 3.51

Molecular weight: 16.63 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

7

0

7

2411

84

632

344.4

38.24

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

7.715 ± 0.88

2.406 ± 0.57

5.89 ± 0.42

5.931 ± 0.216

4.106 ± 0.57

8.295 ± 1.13

1.742 ± 0.191

2.986 ± 0.541

4.148 ± 0.608

8.337 ± 0.45

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

1.701 ± 0.327

3.36 ± 0.892

6.802 ± 0.528

4.148 ± 0.26

7.258 ± 0.414

7.507 ± 0.604

5.641 ± 0.398

6.802 ± 0.539

1.866 ± 0.395

3.36 ± 0.432
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski