Botrytis virus F (isolate Botrytis cinerea/New Zealand/Howitt/2001) (BotV-F)
Average proteome isoelectric point is 7.82
Get precalculated fractions of proteins
Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
All
Note: above files contain also dissociation constants (pKa)
Virtual 2D-PAGE plot for 2 proteins (isoelectric point calculated using IPC2_protein)
Get csv file with sequences according to given criteria:
* You can choose from 21 different methods for calculating isoelectric point
Summary statistics related to proteome-wise predictions
Protein with the lowest isoelectric point:
>sp|Q9DRA1|RDRP_BOTVF RNA replication protein OS=Botrytis virus F (isolate Botrytis cinerea/New Zealand/Howitt/2001) OX=686946 GN=ORF1 PE=4 SV=1
MM1 pKa = 7.56 AVPLEE6 pKa = 4.0 RR7 pKa = 11.84 AFASVTQSFHH17 pKa = 7.14 KK18 pKa = 10.66 DD19 pKa = 2.8 ATQGPTTNEE28 pKa = 3.75 YY29 pKa = 10.65 LVARR33 pKa = 11.84 AEE35 pKa = 4.31 TQRR38 pKa = 11.84 YY39 pKa = 8.37 APYY42 pKa = 10.58 AVRR45 pKa = 11.84 KK46 pKa = 9.99 GPAALLAQVGINTIHH61 pKa = 7.71 DD62 pKa = 4.03 SPLSHH67 pKa = 6.66 SHH69 pKa = 6.22 PACYY73 pKa = 10.26 ALNAFHH79 pKa = 7.04 FLKK82 pKa = 10.85 VIPRR86 pKa = 11.84 YY87 pKa = 9.57 LHH89 pKa = 6.31 GKK91 pKa = 9.1 AEE93 pKa = 4.09 VWGTKK98 pKa = 10.11 DD99 pKa = 2.54 NWFRR103 pKa = 11.84 KK104 pKa = 9.27 LQAQIDD110 pKa = 4.32 SQTTTLTHH118 pKa = 6.24 RR119 pKa = 11.84 NYY121 pKa = 10.87 AITARR126 pKa = 11.84 DD127 pKa = 3.45 HH128 pKa = 5.89 VRR130 pKa = 11.84 YY131 pKa = 9.02 PGTVVDD137 pKa = 5.03 HH138 pKa = 7.13 PGSCTAGTLFMHH150 pKa = 7.7 DD151 pKa = 3.91 ALQYY155 pKa = 7.17 MTPLDD160 pKa = 4.3 VYY162 pKa = 9.73 TLFATSPEE170 pKa = 4.05 MHH172 pKa = 6.79 SLVATAVIPPEE183 pKa = 4.25 SVDD186 pKa = 3.51 RR187 pKa = 11.84 LPAFWPEE194 pKa = 4.51 LYY196 pKa = 10.42 QLAYY200 pKa = 10.96 YY201 pKa = 9.82 EE202 pKa = 4.98 DD203 pKa = 4.24 HH204 pKa = 7.0 LCYY207 pKa = 10.69 APDD210 pKa = 3.79 GNFADD215 pKa = 5.68 AYY217 pKa = 8.49 NQPLAAHH224 pKa = 5.87 QWMTMKK230 pKa = 10.45 SLHH233 pKa = 6.44 GPDD236 pKa = 3.37 FTLSVDD242 pKa = 3.88 VPASRR247 pKa = 11.84 YY248 pKa = 6.64 SHH250 pKa = 6.92 HH251 pKa = 6.83 IFVISKK257 pKa = 10.45 RR258 pKa = 11.84 PGLPDD263 pKa = 2.81 THH265 pKa = 7.81 RR266 pKa = 11.84 DD267 pKa = 3.98 FMCPDD272 pKa = 3.68 LVEE275 pKa = 4.29 LPKK278 pKa = 11.14 DD279 pKa = 3.93 FFPGANKK286 pKa = 9.97 ADD288 pKa = 3.61 KK289 pKa = 10.43 LLPRR293 pKa = 11.84 TLVNQMVEE301 pKa = 4.05 YY302 pKa = 9.88 AASVKK307 pKa = 10.42 RR308 pKa = 11.84 ATIKK312 pKa = 10.79 DD313 pKa = 3.23 ATSRR317 pKa = 11.84 TRR319 pKa = 11.84 AYY321 pKa = 11.11 VKK323 pKa = 9.7 DD324 pKa = 3.57 QKK326 pKa = 10.81 YY327 pKa = 9.92 AAVTPVQQMYY337 pKa = 10.47 LSWFGSGLSQMQFPDD352 pKa = 3.65 RR353 pKa = 11.84 PVTPLDD359 pKa = 3.61 NFATALWYY367 pKa = 10.41 RR368 pKa = 11.84 LLPSRR373 pKa = 11.84 LYY375 pKa = 10.49 RR376 pKa = 11.84 LPATIRR382 pKa = 11.84 NFQLKK387 pKa = 10.58 AFVDD391 pKa = 3.88 QLRR394 pKa = 11.84 TPQYY398 pKa = 10.76 LLHH401 pKa = 6.78 FKK403 pKa = 10.59 LDD405 pKa = 3.98 EE406 pKa = 4.15 YY407 pKa = 11.22 HH408 pKa = 7.09 LSSNDD413 pKa = 3.24 KK414 pKa = 11.08 YY415 pKa = 11.56 SDD417 pKa = 4.02 FYY419 pKa = 11.45 RR420 pKa = 11.84 NEE422 pKa = 3.73 SRR424 pKa = 11.84 QASSKK429 pKa = 11.48 DD430 pKa = 3.17 MLSAFEE436 pKa = 4.85 AICFGGAPEE445 pKa = 4.56 LEE447 pKa = 4.21 KK448 pKa = 10.94 KK449 pKa = 10.4 ILGNNNPAPFATVPNPPSQTALGLATITAAIAFILPNRR487 pKa = 11.84 AARR490 pKa = 11.84 LTRR493 pKa = 11.84 LVARR497 pKa = 11.84 YY498 pKa = 9.25 AIRR501 pKa = 11.84 AVKK504 pKa = 10.26 EE505 pKa = 3.64 IVNPSFLTIPRR516 pKa = 11.84 FGLLSHH522 pKa = 7.2 SIASWLQTDD531 pKa = 4.62 GAVITYY537 pKa = 10.17 GLAPKK542 pKa = 9.5 IASWSAPIWYY552 pKa = 8.83 NAALLAPTDD561 pKa = 3.62 MRR563 pKa = 11.84 SCQVLVDD570 pKa = 3.72 IANDD574 pKa = 3.18 LRR576 pKa = 11.84 FDD578 pKa = 3.66 YY579 pKa = 10.63 RR580 pKa = 11.84 YY581 pKa = 8.79 GTMRR585 pKa = 11.84 LAVTLGLTLLNPFLRR600 pKa = 11.84 RR601 pKa = 11.84 LVLLPFKK608 pKa = 10.38 VLWHH612 pKa = 6.82 SYY614 pKa = 10.48 LPSIKK619 pKa = 10.39 NKK621 pKa = 9.65 LDD623 pKa = 3.34 SMVLMSISTLPDD635 pKa = 3.99 NISVPLLTLRR645 pKa = 11.84 GNLNRR650 pKa = 11.84 QRR652 pKa = 11.84 CPDD655 pKa = 3.76 NKK657 pKa = 10.58 DD658 pKa = 3.02 PTPIHH663 pKa = 6.58 EE664 pKa = 4.85 SDD666 pKa = 4.62 DD667 pKa = 3.61 NSTADD672 pKa = 5.08 DD673 pKa = 4.09 KK674 pKa = 11.58 CLHH677 pKa = 6.45 CPIHH681 pKa = 6.08 CLKK684 pKa = 10.95 SKK686 pKa = 10.43 LSEE689 pKa = 4.11 PAASPDD695 pKa = 3.64 TVPEE699 pKa = 4.41 DD700 pKa = 3.53 NPLQEE705 pKa = 4.69 GDD707 pKa = 3.65 LTEE710 pKa = 4.2 EE711 pKa = 4.48 VYY713 pKa = 10.8 AAALAKK719 pKa = 10.19 KK720 pKa = 7.75 DD721 pKa = 3.9 TPPPYY726 pKa = 8.8 PTRR729 pKa = 11.84 NDD731 pKa = 3.58 CLLVALADD739 pKa = 3.81 GLLTKK744 pKa = 10.57 RR745 pKa = 11.84 ILWFSCIKK753 pKa = 10.26 MFGNTACWVIHH764 pKa = 5.84 DD765 pKa = 4.18 TGKK768 pKa = 10.86 AFDD771 pKa = 3.64 WMHH774 pKa = 6.69 LKK776 pKa = 9.38 MLAEE780 pKa = 3.87 QLKK783 pKa = 9.86 LNVSIEE789 pKa = 3.9 VAAEE793 pKa = 4.13 HH794 pKa = 6.33 DD795 pKa = 3.95 HH796 pKa = 6.61 HH797 pKa = 6.16 WTGLAKK803 pKa = 10.1 RR804 pKa = 11.84 VGPIDD809 pKa = 3.33 GRR811 pKa = 11.84 KK812 pKa = 8.73 IALRR816 pKa = 11.84 WYY818 pKa = 8.09 PYY820 pKa = 9.96 HH821 pKa = 7.03 WEE823 pKa = 3.77 LSDD826 pKa = 5.18 RR827 pKa = 11.84 GRR829 pKa = 11.84 EE830 pKa = 4.24 DD831 pKa = 3.53 YY832 pKa = 10.93 GPPPPPPPPSTTEE845 pKa = 3.86 PPPPPNPPAASPYY858 pKa = 9.95 HH859 pKa = 6.4 SPTVEE864 pKa = 4.23 DD865 pKa = 4.53 EE866 pKa = 4.27 PLEE869 pKa = 4.47 EE870 pKa = 4.74 IPLANSNGEE879 pKa = 3.9 FSTFAFDD886 pKa = 6.12 DD887 pKa = 3.75 MAADD891 pKa = 4.79 DD892 pKa = 5.33 LNPAQPLSSLDD903 pKa = 3.67 LDD905 pKa = 4.26 EE906 pKa = 5.33 EE907 pKa = 4.58 PSAKK911 pKa = 9.78 QEE913 pKa = 4.18 PLEE916 pKa = 4.12 PAAIKK921 pKa = 9.87 TSEE924 pKa = 4.28 PEE926 pKa = 3.79 PLVPEE931 pKa = 4.14 SEE933 pKa = 4.28 EE934 pKa = 4.17 VFFRR938 pKa = 11.84 PSPTPTPSDD947 pKa = 3.49 ATPTPAARR955 pKa = 11.84 APSSVSNEE963 pKa = 3.35 NAQRR967 pKa = 11.84 PRR969 pKa = 11.84 HH970 pKa = 5.93 PLPPVPTGGASAPSNDD986 pKa = 4.25 KK987 pKa = 11.06 LNSAAKK993 pKa = 9.75 QYY995 pKa = 11.38 ARR997 pKa = 11.84 LVAGKK1002 pKa = 7.5 TRR1004 pKa = 11.84 QMTVAQPRR1012 pKa = 11.84 SKK1014 pKa = 10.94 AYY1016 pKa = 10.63 LRR1018 pKa = 11.84 DD1019 pKa = 3.62 LKK1021 pKa = 10.6 RR1022 pKa = 11.84 GNIGTIPTAEE1032 pKa = 4.15 AEE1034 pKa = 4.17 QLDD1037 pKa = 4.36 AYY1039 pKa = 9.66 IDD1041 pKa = 3.42 SWAVNGFNRR1050 pKa = 11.84 SVHH1053 pKa = 5.92 VIYY1056 pKa = 10.53 FCGLPGTGKK1065 pKa = 9.98 SRR1067 pKa = 11.84 RR1068 pKa = 11.84 CMKK1071 pKa = 8.4 MTEE1074 pKa = 4.04 RR1075 pKa = 11.84 LLKK1078 pKa = 9.33 EE1079 pKa = 4.14 NKK1081 pKa = 9.87 YY1082 pKa = 10.0 LAQTVRR1088 pKa = 11.84 IVTPTDD1094 pKa = 3.05 NLRR1097 pKa = 11.84 NSVARR1102 pKa = 11.84 QLKK1105 pKa = 9.19 PPTEE1109 pKa = 4.09 SSYY1112 pKa = 11.65 SVQTYY1117 pKa = 6.8 EE1118 pKa = 4.04 TPIRR1122 pKa = 11.84 QPSLGPVLIVDD1133 pKa = 5.15 EE1134 pKa = 4.48 YY1135 pKa = 11.81 GKK1137 pKa = 9.58 MPAGWLEE1144 pKa = 4.02 TVLFLNPRR1152 pKa = 11.84 VQMVIFTADD1161 pKa = 3.24 PTQGIFRR1168 pKa = 11.84 TRR1170 pKa = 11.84 IPDD1173 pKa = 4.12 AYY1175 pKa = 9.94 CCRR1178 pKa = 11.84 IPSSTEE1184 pKa = 3.7 AIASYY1189 pKa = 8.8 AHH1191 pKa = 7.33 EE1192 pKa = 4.19 YY1193 pKa = 10.41 RR1194 pKa = 11.84 RR1195 pKa = 11.84 VSDD1198 pKa = 3.94 RR1199 pKa = 11.84 PAPGVARR1206 pKa = 11.84 ALGLPTTSRR1215 pKa = 11.84 RR1216 pKa = 11.84 PGQIEE1221 pKa = 4.09 TSTEE1225 pKa = 4.06 LNVDD1229 pKa = 4.44 WITVRR1234 pKa = 11.84 PEE1236 pKa = 3.63 GEE1238 pKa = 3.41 RR1239 pKa = 11.84 AAWHH1243 pKa = 5.42 NTWGGKK1249 pKa = 9.23 VYY1251 pKa = 10.01 TYY1253 pKa = 8.3 ATCQGEE1259 pKa = 4.67 TFHH1262 pKa = 7.34 RR1263 pKa = 11.84 AYY1265 pKa = 11.23 QMVINGNTRR1274 pKa = 11.84 FWDD1277 pKa = 3.91 DD1278 pKa = 3.26 RR1279 pKa = 11.84 DD1280 pKa = 3.45 LFAALTRR1287 pKa = 11.84 GSGTLRR1293 pKa = 11.84 LIYY1296 pKa = 7.69 EE1297 pKa = 4.45 TQSSKK1302 pKa = 10.66 PLPRR1306 pKa = 11.84 STSKK1310 pKa = 10.97 LYY1312 pKa = 10.69 NALLDD1317 pKa = 4.2 FRR1319 pKa = 11.84 TDD1321 pKa = 3.28 PHH1323 pKa = 6.92 KK1324 pKa = 11.06 LPLAIEE1330 pKa = 4.15 EE1331 pKa = 4.38 HH1332 pKa = 5.9 VNRR1335 pKa = 11.84 YY1336 pKa = 8.91 IPSHH1340 pKa = 5.79 LRR1342 pKa = 11.84 NVNQAVPRR1350 pKa = 11.84 RR1351 pKa = 11.84 NAASNPDD1358 pKa = 3.75 ALPSQRR1364 pKa = 11.84 ILPGGQSTTAEE1375 pKa = 4.22 PXQSQASALPTGGEE1389 pKa = 4.25 AIDD1392 pKa = 4.29 VPALDD1397 pKa = 3.85 RR1398 pKa = 11.84 QDD1400 pKa = 3.53 PQRR1403 pKa = 11.84 FPQLKK1408 pKa = 9.69 VLPHH1412 pKa = 5.84 LCGYY1416 pKa = 9.95 IGDD1419 pKa = 4.11 YY1420 pKa = 11.14 SEE1422 pKa = 5.23 ASYY1425 pKa = 10.66 PEE1427 pKa = 4.35 PEE1429 pKa = 4.21 HH1430 pKa = 7.04 PKK1432 pKa = 8.77 TQMLDD1437 pKa = 3.27 ATFPTYY1443 pKa = 10.74 LARR1446 pKa = 11.84 NRR1448 pKa = 11.84 GWNDD1452 pKa = 3.03 PALTDD1457 pKa = 4.78 AVTANYY1463 pKa = 7.69 KK1464 pKa = 10.56 APEE1467 pKa = 4.12 HH1468 pKa = 6.41 RR1469 pKa = 11.84 DD1470 pKa = 2.68 IWVEE1474 pKa = 3.82 AVGEE1478 pKa = 4.37 TTRR1481 pKa = 11.84 QVHH1484 pKa = 6.09 GSGDD1488 pKa = 3.58 DD1489 pKa = 3.12 RR1490 pKa = 11.84 DD1491 pKa = 3.79 VFLEE1495 pKa = 4.08 HH1496 pKa = 7.28 RR1497 pKa = 11.84 GDD1499 pKa = 4.6 DD1500 pKa = 3.48 KK1501 pKa = 11.32 ATANITYY1508 pKa = 10.06 AKK1510 pKa = 10.02 RR1511 pKa = 11.84 LRR1513 pKa = 11.84 FSQRR1517 pKa = 11.84 AANEE1521 pKa = 3.67 RR1522 pKa = 11.84 SIAATKK1528 pKa = 10.2 VAGSEE1533 pKa = 3.93 LFEE1536 pKa = 4.62 AFTRR1540 pKa = 11.84 AIPLPQEE1547 pKa = 4.1 TFNDD1551 pKa = 3.77 SLLEE1555 pKa = 3.98 EE1556 pKa = 4.87 CRR1558 pKa = 11.84 TEE1560 pKa = 3.71 NDD1562 pKa = 3.82 TVHH1565 pKa = 6.28 LTSKK1569 pKa = 10.54 PLATLINNAEE1579 pKa = 4.05 RR1580 pKa = 11.84 SDD1582 pKa = 4.08 PSWSLNMIKK1591 pKa = 10.48 LFIKK1595 pKa = 10.06 GQTVKK1600 pKa = 10.67 KK1601 pKa = 9.16 LEE1603 pKa = 4.18 KK1604 pKa = 9.5 MGSDD1608 pKa = 3.01 ATAGQSIASFRR1619 pKa = 11.84 AEE1621 pKa = 4.23 VLLAWGPYY1629 pKa = 9.23 ARR1631 pKa = 11.84 YY1632 pKa = 8.13 IDD1634 pKa = 3.61 RR1635 pKa = 11.84 RR1636 pKa = 11.84 IRR1638 pKa = 11.84 ALLPPHH1644 pKa = 6.75 VYY1646 pKa = 9.22 IHH1648 pKa = 6.03 SRR1650 pKa = 11.84 RR1651 pKa = 11.84 TNEE1654 pKa = 3.82 DD1655 pKa = 2.99 FEE1657 pKa = 5.27 KK1658 pKa = 10.66 FVAAHH1663 pKa = 6.67 WDD1665 pKa = 3.44 HH1666 pKa = 6.29 TRR1668 pKa = 11.84 EE1669 pKa = 4.26 STDD1672 pKa = 2.95 GDD1674 pKa = 3.77 YY1675 pKa = 10.46 TAYY1678 pKa = 10.41 DD1679 pKa = 3.77 ASQDD1683 pKa = 3.21 ATFVNFEE1690 pKa = 4.2 TLLMRR1695 pKa = 11.84 RR1696 pKa = 11.84 LDD1698 pKa = 3.71 FPLDD1702 pKa = 3.42 IIEE1705 pKa = 5.42 AYY1707 pKa = 10.94 VEE1709 pKa = 4.29 MKK1711 pKa = 10.85 ASITSHH1717 pKa = 6.86 FGPLAIMRR1725 pKa = 11.84 FSGEE1729 pKa = 3.3 VWTYY1733 pKa = 11.18 LFNTLGNIAFTYY1745 pKa = 10.34 AKK1747 pKa = 10.71 YY1748 pKa = 9.69 EE1749 pKa = 4.28 VPSVAQVYY1757 pKa = 10.58 GGDD1760 pKa = 3.79 DD1761 pKa = 3.24 KK1762 pKa = 11.74 SINSPITVRR1771 pKa = 11.84 TGWSQLVGKK1780 pKa = 9.74 FNLVEE1785 pKa = 4.27 KK1786 pKa = 10.0 PVVGYY1791 pKa = 10.53 EE1792 pKa = 3.76 PTFCGWRR1799 pKa = 11.84 IVPGGIVKK1807 pKa = 10.31 DD1808 pKa = 3.71 PQLLFWRR1815 pKa = 11.84 TRR1817 pKa = 11.84 YY1818 pKa = 10.09 ARR1820 pKa = 11.84 IRR1822 pKa = 11.84 YY1823 pKa = 8.03 DD1824 pKa = 3.17 AALWAPGYY1832 pKa = 10.33 YY1833 pKa = 10.15 DD1834 pKa = 4.64 EE1835 pKa = 6.19 LVLSLKK1841 pKa = 10.15 TSDD1844 pKa = 3.71 RR1845 pKa = 11.84 LMDD1848 pKa = 3.71 HH1849 pKa = 6.94 MSPNDD1854 pKa = 3.72 LAYY1857 pKa = 10.69 LQALVRR1863 pKa = 11.84 FYY1865 pKa = 11.02 TKK1867 pKa = 10.62 LSRR1870 pKa = 11.84 RR1871 pKa = 11.84 LPSLADD1877 pKa = 3.59 RR1878 pKa = 11.84 RR1879 pKa = 11.84 RR1880 pKa = 11.84 CNPLPADD1887 pKa = 3.78 SPSVVLSRR1895 pKa = 11.84 DD1896 pKa = 3.05
Molecular weight: 212.27 kDa
Isoelectric point according different methods:
IPC2.protein.svr19 6.655
IPC2_protein 6.825
IPC_protein 6.81
Toseland 6.883
ProMoST 7.263
Dawson 7.322
Bjellqvist 7.454
Wikipedia 7.293
Rodwell 7.337
Grimsley 7.029
Solomon 7.337
Lehninger 7.351
Nozaki 7.688
DTASelect 7.629
Thurlkill 7.673
EMBOSS 7.673
Sillero 7.775
Patrickios 4.228
IPC_peptide 7.351
IPC2_peptide 7.176
IPC2.peptide.svr19 6.943
Protein with the highest isoelectric point:
>sp|Q9DRA1|RDRP_BOTVF RNA replication protein OS=Botrytis virus F (isolate Botrytis cinerea/New Zealand/Howitt/2001) OX=686946 GN=ORF1 PE=4 SV=1
MM1 pKa = 6.05 TTSRR5 pKa = 11.84 FATFDD10 pKa = 3.41 IEE12 pKa = 4.8 SEE14 pKa = 4.2 TGLTPGAYY22 pKa = 7.95 PAPLPTLEE30 pKa = 4.22 QQLHH34 pKa = 6.4 DD35 pKa = 4.44 RR36 pKa = 11.84 NAILAAIPSLARR48 pKa = 11.84 AKK50 pKa = 10.6 LDD52 pKa = 3.24 AATLKK57 pKa = 10.66 RR58 pKa = 11.84 RR59 pKa = 11.84 FANFLLTLGMVGTTSKK75 pKa = 11.06 GSYY78 pKa = 9.48 EE79 pKa = 4.06 EE80 pKa = 5.66 LIIPPVKK87 pKa = 10.68 GMGSSTGFRR96 pKa = 11.84 ARR98 pKa = 11.84 EE99 pKa = 3.73 LVQIITSSPAPPGFDD114 pKa = 3.03 GNQTLRR120 pKa = 11.84 QFARR124 pKa = 11.84 PYY126 pKa = 10.47 APQVQNMIAQGKK138 pKa = 9.25 FKK140 pKa = 10.83 TNLYY144 pKa = 10.28 DD145 pKa = 3.73 KK146 pKa = 10.24 YY147 pKa = 9.48 GKK149 pKa = 10.04 SVGAPPHH156 pKa = 5.47 VCIDD160 pKa = 3.75 FNDD163 pKa = 3.72 AMDD166 pKa = 3.87 LQMFHH171 pKa = 6.32 STAEE175 pKa = 3.95 FEE177 pKa = 4.55 SAHH180 pKa = 6.2 KK181 pKa = 10.6 VRR183 pKa = 11.84 EE184 pKa = 3.93 LAIAEE189 pKa = 3.87 ASARR193 pKa = 11.84 EE194 pKa = 4.16 NAPRR198 pKa = 11.84 PAANPRR204 pKa = 11.84 AAKK207 pKa = 9.83 PIIGQTAPAFHH218 pKa = 6.92 SGDD221 pKa = 3.4 AAKK224 pKa = 10.41 QSGGQPVNIKK234 pKa = 10.37 PSLAQSAGFDD244 pKa = 3.49 SHH246 pKa = 7.06 RR247 pKa = 11.84 PPPEE251 pKa = 3.9 TPPRR255 pKa = 11.84 AGTPSSQKK263 pKa = 10.29 SGQSGQTTIQPPASHH278 pKa = 7.03 GILSGMLGSHH288 pKa = 7.21 KK289 pKa = 9.68 STPHH293 pKa = 6.51 SSPQQTPKK301 pKa = 10.67 KK302 pKa = 10.33
Molecular weight: 32.08 kDa
Isoelectric point according different methods:
IPC2.protein.svr19 8.981
IPC2_protein 9.033
IPC_protein 9.004
Toseland 9.911
ProMoST 9.575
Dawson 10.087
Bjellqvist 9.706
Wikipedia 10.218
Rodwell 10.57
Grimsley 10.131
Solomon 10.116
Lehninger 10.087
Nozaki 9.897
DTASelect 9.706
Thurlkill 9.94
EMBOSS 10.306
Sillero 9.984
Patrickios 10.218
IPC_peptide 10.116
IPC2_peptide 8.17
IPC2.peptide.svr19 7.981
Peptides (in silico digests for buttom-up proteomics)
Below you can find
in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.
Try ESI
ChTry ESI
ArgC ESI
LysN ESI
TryLysC ESI
Try MALDI
ChTry MALDI
ArgC MALDI
LysN MALDI
TryLysC MALDI
Try LTQ
ChTry LTQ
ArgC LTQ
LysN LTQ
TryLysC LTQ
Try MSlow
ChTry MSlow
ArgC MSlow
LysN MSlow
TryLysC MSlow
Try MShigh
ChTry MShigh
ArgC MShigh
LysN MShigh
TryLysC MShigh
General Statistics
Number of major isoforms
Number of additional isoforms
Number of all proteins
Number of amino acids
Min. Seq. Length
Max. Seq. Length
Avg. Seq. Length
Avg. Mol. Weight
2
0
2
2198
302
1896
1099.0
122.17
Amino acid frequency
Ala
Cys
Asp
Glu
Phe
Gly
His
Ile
Lys
Leu
10.191 ± 0.873
1.046 ± 0.303
5.641 ± 0.987
4.686 ± 0.302
3.731 ± 0.243
5.005 ± 1.247
2.73 ± 0.106
4.231 ± 0.312
4.231 ± 0.452
9.327 ± 1.146
Met
Asn
Gln
Pro
Arg
Ser
Thr
Val
Trp
Tyr
1.82 ± 0.211
3.822 ± 0.357
8.917 ± 0.711
3.731 ± 1.085
6.506 ± 0.652
7.006 ± 0.96
7.097 ± 0.079
5.05 ± 1.017
1.456 ± 0.617
3.731 ± 0.879
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level
Most of the basic statistics you can see at this page can be downloaded from this CSV file
For dipeptide frequency statistics click here