Klebsiella phage vB_KpnP_SU503

Taxonomy: Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Autographiviridae; Slopekvirinae; Drulisvirus; Klebsiella virus SU503

Average proteome isoelectric point is 6.56

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 54 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A0C5Q3V8|A0A0C5Q3V8_9CAUD Uncharacterized protein OS=Klebsiella phage vB_KpnP_SU503 OX=1610834 GN=SU503_05 PE=4 SV=1
MM1 pKa = 7.26VNVFNIIVTSAMLVLGNDD19 pKa = 3.45VNNPVPYY26 pKa = 9.17CTVQIQQQGQQPRR39 pKa = 11.84PEE41 pKa = 3.91YY42 pKa = 10.84DD43 pKa = 3.05LFEE46 pKa = 4.98NPEE49 pKa = 4.37GGCKK53 pKa = 9.74EE54 pKa = 4.06LGALVLEE61 pKa = 4.9AVQEE65 pKa = 4.19QEE67 pKa = 3.78PNAAVTLTVDD77 pKa = 3.83GVSNNDD83 pKa = 2.7II84 pKa = 4.04

Molecular weight: 9.1 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A0C5PR04|A0A0C5PR04_9CAUD Uncharacterized protein OS=Klebsiella phage vB_KpnP_SU503 OX=1610834 GN=SU503_04 PE=4 SV=1
MM1 pKa = 8.21RR2 pKa = 11.84IITWAKK8 pKa = 7.54EE9 pKa = 3.66QYY11 pKa = 11.04AVFLLMRR18 pKa = 11.84AQRR21 pKa = 11.84LQQRR25 pKa = 11.84ANDD28 pKa = 3.63WHH30 pKa = 6.22WAANSHH36 pKa = 5.18AHH38 pKa = 6.13RR39 pKa = 11.84VSLLGNEE46 pKa = 4.31ISAHH50 pKa = 6.35RR51 pKa = 11.84YY52 pKa = 8.79HH53 pKa = 7.31LTRR56 pKa = 11.84QCAKK60 pKa = 9.58SRR62 pKa = 11.84RR63 pKa = 11.84RR64 pKa = 11.84AYY66 pKa = 10.62ALGAEE71 pKa = 4.34ATAAEE76 pKa = 4.57TKK78 pKa = 10.24AHH80 pKa = 5.86NFISKK85 pKa = 10.22HH86 pKa = 4.86KK87 pKa = 10.71LKK89 pKa = 11.07GFDD92 pKa = 3.17

Molecular weight: 10.71 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

54

0

54

13588

51

1232

251.6

27.86

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

10.355 ± 0.599

1.303 ± 0.199

6.241 ± 0.216

5.895 ± 0.374

3.069 ± 0.166

7.426 ± 0.296

1.832 ± 0.154

4.578 ± 0.181

4.901 ± 0.306

8.846 ± 0.253

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.907 ± 0.213

4.092 ± 0.245

3.783 ± 0.246

4.806 ± 0.385

6.049 ± 0.328

6.219 ± 0.273

5.674 ± 0.299

6.903 ± 0.223

1.332 ± 0.099

3.79 ± 0.269
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski