Bacillus cellulosilyticus (strain ATCC 21833 / DSM 2522 / FERM P-1141 / JCM 9156 / N-4)
Average proteome isoelectric point is 6.27
Get precalculated fractions of proteins
Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
All
Note: above files contain also dissociation constants (pKa)
Virtual 2D-PAGE plot for 4253 proteins (isoelectric point calculated using IPC2_protein)
Get csv file with sequences according to given criteria:
* You can choose from 21 different methods for calculating isoelectric point
Summary statistics related to proteome-wise predictions
Protein with the lowest isoelectric point:
>tr|E6TSN8|E6TSN8_BACCJ SEC-C motif domain protein OS=Bacillus cellulosilyticus (strain ATCC 21833 / DSM 2522 / FERM P-1141 / JCM 9156 / N-4) OX=649639 GN=Bcell_1281 PE=4 SV=1
MM1 pKa = 7.58 GKK3 pKa = 8.17 TMKK6 pKa = 9.89 QLKK9 pKa = 9.88 RR10 pKa = 11.84 LTAMMLVFILLIGTSFTNVNIAYY33 pKa = 9.77 GEE35 pKa = 4.2 SSNFEE40 pKa = 3.82 YY41 pKa = 9.47 RR42 pKa = 11.84 TTLEE46 pKa = 4.01 GTSFVGPQDD55 pKa = 4.61 EE56 pKa = 4.36 IFKK59 pKa = 9.09 TANIEE64 pKa = 4.14 GAVPTNKK71 pKa = 8.38 WWSSAIWNEE80 pKa = 4.25 HH81 pKa = 5.08 SSAMYY86 pKa = 6.98 PHH88 pKa = 7.67 PYY90 pKa = 9.51 SVRR93 pKa = 11.84 AYY95 pKa = 9.49 EE96 pKa = 4.22 SGLGVSYY103 pKa = 10.93 PDD105 pKa = 3.1 VDD107 pKa = 4.4 VVNHH111 pKa = 6.75 DD112 pKa = 4.25 NYY114 pKa = 10.87 PDD116 pKa = 3.79 VDD118 pKa = 3.76 TLMIDD123 pKa = 3.23 ARR125 pKa = 11.84 YY126 pKa = 10.62 DD127 pKa = 3.49 EE128 pKa = 5.24 ADD130 pKa = 3.55 LVIGGEE136 pKa = 4.22 GLTSNEE142 pKa = 4.18 ALVDD146 pKa = 4.59 GYY148 pKa = 11.61 GDD150 pKa = 3.36 WTIDD154 pKa = 4.15 LLFEE158 pKa = 5.68 NDD160 pKa = 4.1 DD161 pKa = 3.74 QSQSMTTTTGLGVPYY176 pKa = 10.1 IYY178 pKa = 11.03 VNYY181 pKa = 9.28 EE182 pKa = 3.74 NTVPTIDD189 pKa = 4.04 LNGDD193 pKa = 3.43 GTVWSGDD200 pKa = 3.52 DD201 pKa = 3.9 GQDD204 pKa = 2.99 HH205 pKa = 6.55 VLGLTINDD213 pKa = 3.03 RR214 pKa = 11.84 HH215 pKa = 6.8 YY216 pKa = 11.52 GIFAPTGTTWSGIGDD231 pKa = 3.9 STLVADD237 pKa = 4.86 LPEE240 pKa = 5.64 GSDD243 pKa = 3.76 YY244 pKa = 11.39 LSVALLPDD252 pKa = 3.95 NAQSTLDD259 pKa = 3.9 LFSEE263 pKa = 4.36 HH264 pKa = 7.34 AYY266 pKa = 9.57 TFVTNTVADD275 pKa = 4.03 FTYY278 pKa = 10.85 DD279 pKa = 3.37 EE280 pKa = 4.45 NTSKK284 pKa = 9.34 VTTTFHH290 pKa = 6.82 VEE292 pKa = 3.68 TDD294 pKa = 3.53 VKK296 pKa = 10.52 EE297 pKa = 4.55 GSSTEE302 pKa = 4.34 TIFALYY308 pKa = 8.31 PHH310 pKa = 6.3 QWNNTNDD317 pKa = 3.61 TYY319 pKa = 11.57 SDD321 pKa = 3.44 EE322 pKa = 4.85 LKK324 pKa = 10.03 YY325 pKa = 10.66 HH326 pKa = 5.82 SPRR329 pKa = 11.84 GTMKK333 pKa = 10.13 TLIGEE338 pKa = 4.43 SFTTEE343 pKa = 3.43 MTYY346 pKa = 11.12 NGIMPHH352 pKa = 6.6 LPNSNVDD359 pKa = 3.69 EE360 pKa = 4.98 EE361 pKa = 4.48 LLQDD365 pKa = 4.8 LFNDD369 pKa = 3.87 VMNSQNAEE377 pKa = 3.8 FRR379 pKa = 11.84 AGPEE383 pKa = 4.28 EE384 pKa = 4.01 PFGTYY389 pKa = 8.08 WYY391 pKa = 9.62 GKK393 pKa = 8.25 NFGRR397 pKa = 11.84 ISQLLPIARR406 pKa = 11.84 SLGDD410 pKa = 3.82 DD411 pKa = 3.97 DD412 pKa = 5.41 AAEE415 pKa = 4.01 ALIAEE420 pKa = 4.52 MNDD423 pKa = 4.11 VFDD426 pKa = 4.62 LWFDD430 pKa = 3.54 PSGDD434 pKa = 3.23 NFFYY438 pKa = 11.4 YY439 pKa = 10.29 NDD441 pKa = 3.18 NWGTLIGYY449 pKa = 7.99 PNGHH453 pKa = 6.76 GAGEE457 pKa = 4.31 WLNDD461 pKa = 3.23 HH462 pKa = 6.8 HH463 pKa = 6.88 FHH465 pKa = 6.78 FGYY468 pKa = 9.35 WVYY471 pKa = 10.54 GAAMMALDD479 pKa = 4.83 DD480 pKa = 5.62 SSWLDD485 pKa = 3.35 NEE487 pKa = 4.21 PRR489 pKa = 11.84 AEE491 pKa = 4.11 MVEE494 pKa = 5.68 LMLQDD499 pKa = 3.43 YY500 pKa = 10.72 ANWDD504 pKa = 3.69 RR505 pKa = 11.84 EE506 pKa = 4.19 DD507 pKa = 4.73 DD508 pKa = 3.65 KK509 pKa = 11.59 FPYY512 pKa = 10.12 LRR514 pKa = 11.84 NFEE517 pKa = 4.64 PYY519 pKa = 10.06 AGHH522 pKa = 7.19 AWASGNATDD531 pKa = 5.92 LGDD534 pKa = 3.69 IQPGNNQEE542 pKa = 4.24 SSSEE546 pKa = 4.35 SINAWAAMIMWGEE559 pKa = 3.73 ATGNQEE565 pKa = 3.65 ILEE568 pKa = 4.31 TGIYY572 pKa = 10.13 LYY574 pKa = 8.27 TTEE577 pKa = 4.48 VEE579 pKa = 5.45 AINQYY584 pKa = 10.63 YY585 pKa = 10.2 FDD587 pKa = 4.58 IEE589 pKa = 4.51 GEE591 pKa = 4.19 NLPEE595 pKa = 4.39 EE596 pKa = 4.45 YY597 pKa = 9.77 PYY599 pKa = 11.1 GYY601 pKa = 11.1 VPMLFSSGAEE611 pKa = 3.66 YY612 pKa = 8.53 RR613 pKa = 11.84 TWWTTGKK620 pKa = 10.7 EE621 pKa = 3.97 EE622 pKa = 3.95 THH624 pKa = 7.08 GINMLPITAASFYY637 pKa = 10.4 LGQSPEE643 pKa = 4.17 YY644 pKa = 10.9 VRR646 pKa = 11.84 ANYY649 pKa = 11.35 DD650 pKa = 3.05 MMIDD654 pKa = 3.52 QKK656 pKa = 11.5 GGGQEE661 pKa = 4.2 TTWRR665 pKa = 11.84 DD666 pKa = 4.05 IIWMYY671 pKa = 10.41 QALADD676 pKa = 4.62 PDD678 pKa = 3.67 VAMDD682 pKa = 4.45 KK683 pKa = 11.02 FMTQIDD689 pKa = 4.33 TYY691 pKa = 10.38 GAEE694 pKa = 4.33 FGHH697 pKa = 6.2 SKK699 pKa = 9.37 PHH701 pKa = 5.77 TYY703 pKa = 9.67 QWISNLTEE711 pKa = 3.88 WGHH714 pKa = 6.43 VDD716 pKa = 3.26 TTVTADD722 pKa = 3.35 TPFYY726 pKa = 11.17 SVFDD730 pKa = 3.79 NEE732 pKa = 4.59 GVKK735 pKa = 9.77 TYY737 pKa = 10.69 LAYY740 pKa = 10.8 NGSGEE745 pKa = 4.28 EE746 pKa = 4.06 KK747 pKa = 9.43 TVTFTDD753 pKa = 3.12 HH754 pKa = 6.8 GGNPTVEE761 pKa = 4.24 LTVPAGSTATTVRR774 pKa = 11.84 NTNLEE779 pKa = 4.17 DD780 pKa = 3.35 VDD782 pKa = 5.7 LPDD785 pKa = 5.65 LVVKK789 pKa = 10.73 DD790 pKa = 3.89 ITWQPSNPHH799 pKa = 6.66 PGDD802 pKa = 3.16 NVTFQLVVQNQGYY815 pKa = 10.56 AEE817 pKa = 4.51 AKK819 pKa = 10.47 NDD821 pKa = 3.8 DD822 pKa = 4.38 DD823 pKa = 4.41 SVGMVISVEE832 pKa = 4.33 GYY834 pKa = 10.07 EE835 pKa = 5.44 GGPEE839 pKa = 4.21 DD840 pKa = 4.23 NPEE843 pKa = 4.42 LIGWGGVSDD852 pKa = 5.62 PIPPGEE858 pKa = 4.34 TVTMTLRR865 pKa = 11.84 GDD867 pKa = 3.64 WEE869 pKa = 4.57 SPATSWQAEE878 pKa = 4.32 LGTHH882 pKa = 5.38 NVIGHH887 pKa = 6.35 VDD889 pKa = 3.46 NQDD892 pKa = 4.92 DD893 pKa = 3.79 IDD895 pKa = 5.07 EE896 pKa = 4.58 VNTDD900 pKa = 3.1 NNVIEE905 pKa = 4.3 KK906 pKa = 10.2 EE907 pKa = 4.24 IVVTEE912 pKa = 4.4 APATNEE918 pKa = 3.89 LYY920 pKa = 11.05 VRR922 pKa = 11.84 DD923 pKa = 4.21 LGSLPVQSLSISQGSGTEE941 pKa = 4.17 SAEE944 pKa = 4.06 LPTNGDD950 pKa = 3.45 PLTYY954 pKa = 9.98 VVRR957 pKa = 11.84 DD958 pKa = 3.34 ISGEE962 pKa = 4.1 HH963 pKa = 6.46 IPGDD967 pKa = 3.56 DD968 pKa = 3.33 SAYY971 pKa = 10.64 SIYY974 pKa = 10.91 VDD976 pKa = 3.35 AGTDD980 pKa = 2.94 EE981 pKa = 4.51 GMTVQADD988 pKa = 3.03 ISFDD992 pKa = 3.78 FEE994 pKa = 6.48 GDD996 pKa = 3.98 GEE998 pKa = 4.19 WDD1000 pKa = 3.53 KK1001 pKa = 11.53 VVSSNITALDD1011 pKa = 3.53 ASEE1014 pKa = 3.99 GWEE1017 pKa = 4.34 AIDD1020 pKa = 4.8 FSSADD1025 pKa = 3.54 VEE1027 pKa = 5.24 GSFTDD1032 pKa = 3.99 LVNGKK1037 pKa = 8.55 IQVEE1041 pKa = 4.29 VSVVDD1046 pKa = 3.44 GDD1048 pKa = 4.02 GTVDD1052 pKa = 4.28 LKK1054 pKa = 11.8 VNAQDD1059 pKa = 4.54 SPSKK1063 pKa = 10.66 LQLPYY1068 pKa = 9.33 EE1069 pKa = 4.24 TLVVDD1074 pKa = 5.3 RR1075 pKa = 11.84 KK1076 pKa = 10.81 ADD1078 pKa = 3.57 LTINEE1083 pKa = 4.01 VWLDD1087 pKa = 3.64 PEE1089 pKa = 4.22 NPEE1092 pKa = 3.65 TGEE1095 pKa = 4.02 NIRR1098 pKa = 11.84 FNASVTNLGEE1108 pKa = 4.0 RR1109 pKa = 11.84 VAADD1113 pKa = 3.33 GNGAVGIEE1121 pKa = 3.72 FVVYY1125 pKa = 10.58 KK1126 pKa = 10.77 DD1127 pKa = 3.79 GSQVDD1132 pKa = 4.28 ATWGWITYY1140 pKa = 10.14 QIDD1143 pKa = 3.48 PGEE1146 pKa = 4.37 TEE1148 pKa = 3.97 VLANLGGQGPALSLDD1163 pKa = 3.46 APGEE1167 pKa = 4.34 YY1168 pKa = 9.08 TVVAHH1173 pKa = 6.99 VDD1175 pKa = 3.35 NQNQISEE1182 pKa = 4.33 YY1183 pKa = 10.96 NIDD1186 pKa = 3.67 NNQFEE1191 pKa = 4.83 YY1192 pKa = 10.74 TFVVEE1197 pKa = 5.22 GDD1199 pKa = 4.13 ADD1201 pKa = 4.55 DD1202 pKa = 5.33 SDD1204 pKa = 4.39 TPSDD1208 pKa = 4.3 PDD1210 pKa = 3.74 TPSDD1214 pKa = 3.64 PGQDD1218 pKa = 3.74 KK1219 pKa = 9.81 EE1220 pKa = 4.29 WEE1222 pKa = 4.27 EE1223 pKa = 4.05 VGEE1226 pKa = 4.14 NLLSNGSFEE1235 pKa = 4.95 NGLEE1239 pKa = 3.57 NWATHH1244 pKa = 5.15 NQGDD1248 pKa = 4.23 HH1249 pKa = 6.51 EE1250 pKa = 5.07 GGAGLASFIVEE1261 pKa = 3.89 NDD1263 pKa = 3.09 QLEE1266 pKa = 4.48 IEE1268 pKa = 4.45 VEE1270 pKa = 4.16 QVGWDD1275 pKa = 2.89 WWHH1278 pKa = 6.09 IQLFQEE1284 pKa = 4.47 DD1285 pKa = 4.62 VEE1287 pKa = 4.96 VPSGTYY1293 pKa = 9.98 KK1294 pKa = 10.26 IEE1296 pKa = 4.13 FDD1298 pKa = 3.22 MSSEE1302 pKa = 4.16 EE1303 pKa = 3.9 EE1304 pKa = 3.97 RR1305 pKa = 11.84 PVYY1308 pKa = 10.84 VEE1310 pKa = 3.85 LTGSGTGIQEE1320 pKa = 4.35 FEE1322 pKa = 4.26 VDD1324 pKa = 3.91 ASMTTYY1330 pKa = 8.82 EE1331 pKa = 4.38 TVVQVDD1337 pKa = 4.04 DD1338 pKa = 4.12 EE1339 pKa = 4.7 GSYY1342 pKa = 11.59 NLLFGLGRR1350 pKa = 11.84 NSGDD1354 pKa = 3.79 PEE1356 pKa = 4.67 PEE1358 pKa = 3.71 TPYY1361 pKa = 10.65 TITLDD1366 pKa = 3.4 NVRR1369 pKa = 11.84 LVEE1372 pKa = 4.1 VQEE1375 pKa = 4.34 VEE1377 pKa = 4.01 GTDD1380 pKa = 3.61 PVEE1383 pKa = 4.22 PAPEE1387 pKa = 3.86 VDD1389 pKa = 3.63 VEE1391 pKa = 4.79 SGVSTPVFANQVVKK1405 pKa = 10.81 LQDD1408 pKa = 3.28 TNASIKK1414 pKa = 10.07 MPEE1417 pKa = 4.14 NLPEE1421 pKa = 4.18 GTTISIEE1428 pKa = 3.82 LDD1430 pKa = 3.35 DD1431 pKa = 5.47 RR1432 pKa = 11.84 STEE1435 pKa = 4.17 GLVKK1439 pKa = 10.79 AGDD1442 pKa = 3.79 VVKK1445 pKa = 11.13 VNLEE1449 pKa = 3.9 LPEE1452 pKa = 4.64 GFDD1455 pKa = 3.29 EE1456 pKa = 4.52 ALEE1459 pKa = 4.18 YY1460 pKa = 10.78 EE1461 pKa = 4.51 LTLSYY1466 pKa = 11.07 DD1467 pKa = 3.53 DD1468 pKa = 4.18 QYY1470 pKa = 11.71 EE1471 pKa = 4.28 SVAIYY1476 pKa = 10.26 YY1477 pKa = 10.42 YY1478 pKa = 11.18 NEE1480 pKa = 4.1 TNEE1483 pKa = 3.61 EE1484 pKa = 3.98 WEE1486 pKa = 4.34 YY1487 pKa = 11.68 VGGDD1491 pKa = 3.46 MNQDD1495 pKa = 3.13 TNTITVSVDD1504 pKa = 2.68 HH1505 pKa = 6.82 FSTYY1509 pKa = 10.46 GVFEE1513 pKa = 3.92 ITEE1516 pKa = 4.17 EE1517 pKa = 3.91 QEE1519 pKa = 4.32 KK1520 pKa = 9.94 IHH1522 pKa = 6.0 EE1523 pKa = 4.38 LEE1525 pKa = 4.66 EE1526 pKa = 5.45 IIADD1530 pKa = 3.76 LQDD1533 pKa = 4.49 RR1534 pKa = 11.84 ISEE1537 pKa = 4.59 LEE1539 pKa = 4.0 DD1540 pKa = 3.37 SSDD1543 pKa = 3.29 IVEE1546 pKa = 4.33 LEE1548 pKa = 3.83 LRR1550 pKa = 11.84 VAEE1553 pKa = 5.25 LEE1555 pKa = 4.27 GQLVALQAQYY1565 pKa = 11.6 SDD1567 pKa = 5.02 LEE1569 pKa = 4.47 DD1570 pKa = 4.28 FVAEE1574 pKa = 4.27 LEE1576 pKa = 4.28 QRR1578 pKa = 11.84 ISDD1581 pKa = 3.65 LRR1583 pKa = 11.84 SEE1585 pKa = 4.3 LEE1587 pKa = 3.83 EE1588 pKa = 4.04 LKK1590 pKa = 10.91 EE1591 pKa = 4.79 DD1592 pKa = 3.29 ISEE1595 pKa = 4.28 STEE1598 pKa = 3.87 SGDD1601 pKa = 3.3 NGTVSDD1607 pKa = 4.18 EE1608 pKa = 4.91 DD1609 pKa = 3.7 GTEE1612 pKa = 3.77 EE1613 pKa = 3.93 DD1614 pKa = 4.29 TEE1616 pKa = 4.52 SEE1618 pKa = 4.19 EE1619 pKa = 4.27 SSKK1622 pKa = 11.54 EE1623 pKa = 3.96 EE1624 pKa = 3.98 GSKK1627 pKa = 11.11 DD1628 pKa = 3.48 GDD1630 pKa = 4.03 EE1631 pKa = 5.23 LPDD1634 pKa = 3.59 TATNAYY1640 pKa = 8.79 NYY1642 pKa = 10.73 LMVGMLLLLIGGVTFFIRR1660 pKa = 11.84 RR1661 pKa = 11.84 KK1662 pKa = 9.49 QLGG1665 pKa = 3.3
Molecular weight: 184.48 kDa
Isoelectric point according different methods:
IPC2.protein.svr19 3.698
IPC2_protein 3.745
IPC_protein 3.77
Toseland 3.554
ProMoST 3.897
Dawson 3.745
Bjellqvist 3.897
Wikipedia 3.643
Rodwell 3.592
Grimsley 3.465
Solomon 3.745
Lehninger 3.694
Nozaki 3.846
DTASelect 4.05
Thurlkill 3.592
EMBOSS 3.656
Sillero 3.884
Patrickios 1.265
IPC_peptide 3.745
IPC2_peptide 3.872
IPC2.peptide.svr19 3.798
Protein with the highest isoelectric point:
>tr|E6TZZ8|E6TZZ8_BACCJ Regulatory protein MarR OS=Bacillus cellulosilyticus (strain ATCC 21833 / DSM 2522 / FERM P-1141 / JCM 9156 / N-4) OX=649639 GN=Bcell_0721 PE=4 SV=1
MM1 pKa = 7.69 GKK3 pKa = 7.98 PTFNPNNRR11 pKa = 11.84 KK12 pKa = 9.18 RR13 pKa = 11.84 KK14 pKa = 8.18 KK15 pKa = 8.47 VHH17 pKa = 5.57 GFRR20 pKa = 11.84 SRR22 pKa = 11.84 MSTKK26 pKa = 9.83 NGRR29 pKa = 11.84 RR30 pKa = 11.84 VLANRR35 pKa = 11.84 RR36 pKa = 11.84 RR37 pKa = 11.84 KK38 pKa = 8.69 GRR40 pKa = 11.84 KK41 pKa = 8.69 VLSAA45 pKa = 4.05
Molecular weight: 5.29 kDa
Isoelectric point according different methods:
IPC2.protein.svr19 9.517
IPC2_protein 11.213
IPC_protein 12.793
Toseland 12.969
ProMoST 13.451
Dawson 12.969
Bjellqvist 12.954
Wikipedia 13.437
Rodwell 12.705
Grimsley 12.998
Solomon 13.451
Lehninger 13.364
Nozaki 12.969
DTASelect 12.954
Thurlkill 12.969
EMBOSS 13.466
Sillero 12.969
Patrickios 12.427
IPC_peptide 13.466
IPC2_peptide 12.442
IPC2.peptide.svr19 9.142
Peptides (in silico digests for buttom-up proteomics)
Below you can find
in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.
Try ESI
ChTry ESI
ArgC ESI
LysN ESI
TryLysC ESI
Try MALDI
ChTry MALDI
ArgC MALDI
LysN MALDI
TryLysC MALDI
Try LTQ
ChTry LTQ
ArgC LTQ
LysN LTQ
TryLysC LTQ
Try MSlow
ChTry MSlow
ArgC MSlow
LysN MSlow
TryLysC MSlow
Try MShigh
ChTry MShigh
ArgC MShigh
LysN MShigh
TryLysC MShigh
General Statistics
Number of major isoforms
Number of additional isoforms
Number of all proteins
Number of amino acids
Min. Seq. Length
Max. Seq. Length
Avg. Seq. Length
Avg. Mol. Weight
4253
0
4253
1243458
26
1773
292.4
33.04
Amino acid frequency
Ala
Cys
Asp
Glu
Phe
Gly
His
Ile
Lys
Leu
6.298 ± 0.044
0.7 ± 0.011
5.37 ± 0.033
7.966 ± 0.044
4.68 ± 0.033
6.509 ± 0.037
2.237 ± 0.019
8.163 ± 0.038
6.731 ± 0.045
9.556 ± 0.039
Met
Asn
Gln
Pro
Arg
Ser
Thr
Val
Trp
Tyr
2.724 ± 0.017
4.835 ± 0.034
3.375 ± 0.021
3.522 ± 0.027
4.024 ± 0.028
6.095 ± 0.031
5.442 ± 0.025
7.006 ± 0.032
1.075 ± 0.015
3.693 ± 0.027
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level
Most of the basic statistics you can see at this page can be downloaded from this CSV file
For dipeptide frequency statistics click here