Muricauda alvinocaridis

Taxonomy: cellular organisms; Bacteria; FCB group; Bacteroidetes/Chlorobi group; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Muricauda

Average proteome isoelectric point is 6.28

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 3339 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A4S8RQJ5|A0A4S8RQJ5_9FLAO Uncharacterized protein OS=Muricauda alvinocaridis OX=2530200 GN=EZV76_15095 PE=4 SV=1
MM1 pKa = 6.73NTYY4 pKa = 10.41ILRR7 pKa = 11.84LLLLCMLFLCAPSCNQDD24 pKa = 3.24DD25 pKa = 4.43TVVDD29 pKa = 4.55DD30 pKa = 5.92IINEE34 pKa = 4.17EE35 pKa = 4.62PDD37 pKa = 3.95PDD39 pKa = 4.76PNPDD43 pKa = 4.46PDD45 pKa = 5.19PDD47 pKa = 4.95PDD49 pKa = 4.97PDD51 pKa = 3.49TDD53 pKa = 3.82KK54 pKa = 11.28PIFEE58 pKa = 5.27GDD60 pKa = 3.14TGNVLVYY67 pKa = 10.6DD68 pKa = 3.96EE69 pKa = 5.16EE70 pKa = 5.77KK71 pKa = 10.81IFDD74 pKa = 4.19GYY76 pKa = 11.58VLVNDD81 pKa = 4.09ASDD84 pKa = 3.36NRR86 pKa = 11.84VYY88 pKa = 11.57LMTKK92 pKa = 8.82EE93 pKa = 3.95GKK95 pKa = 9.01IRR97 pKa = 11.84YY98 pKa = 7.55EE99 pKa = 3.65WEE101 pKa = 3.84LPSNIGNDD109 pKa = 3.63AEE111 pKa = 4.19LLEE114 pKa = 4.32NGKK117 pKa = 9.46LLVALTDD124 pKa = 3.41EE125 pKa = 4.2NAFYY129 pKa = 11.0DD130 pKa = 3.4VGGFGGRR137 pKa = 11.84IQIINPDD144 pKa = 3.74RR145 pKa = 11.84SVEE148 pKa = 3.7WDD150 pKa = 3.52FLYY153 pKa = 9.91STEE156 pKa = 5.35DD157 pKa = 3.8YY158 pKa = 10.51ISHH161 pKa = 7.15HH162 pKa = 7.38DD163 pKa = 4.57IEE165 pKa = 4.73MLPNGNVLILAWQKK179 pKa = 10.7RR180 pKa = 11.84SKK182 pKa = 10.84EE183 pKa = 4.0DD184 pKa = 3.44ALQAGYY190 pKa = 10.83DD191 pKa = 4.04GIPDD195 pKa = 3.74NEE197 pKa = 4.2LLLLEE202 pKa = 4.6SLIEE206 pKa = 4.12VNPEE210 pKa = 3.47NNDD213 pKa = 3.7IVWEE217 pKa = 4.06WHH219 pKa = 5.82SWDD222 pKa = 5.68HH223 pKa = 7.29IIQDD227 pKa = 3.89FDD229 pKa = 3.61DD230 pKa = 4.37TKK232 pKa = 11.68DD233 pKa = 3.44SFGDD237 pKa = 3.28IAEE240 pKa = 4.3NPQLIDD246 pKa = 5.12LNFHH250 pKa = 7.19DD251 pKa = 5.84DD252 pKa = 3.58DD253 pKa = 6.66RR254 pKa = 11.84GDD256 pKa = 3.33IMHH259 pKa = 7.31ANGLDD264 pKa = 3.64YY265 pKa = 11.37DD266 pKa = 4.2PVNDD270 pKa = 5.89LIYY273 pKa = 10.76LSVNFYY279 pKa = 11.12SEE281 pKa = 3.91VWVIDD286 pKa = 3.46HH287 pKa = 6.2STTTEE292 pKa = 3.66EE293 pKa = 4.12AATNSGGNYY302 pKa = 9.88NKK304 pKa = 10.79GGDD307 pKa = 3.43LVYY310 pKa = 10.85RR311 pKa = 11.84FGNPLAYY318 pKa = 9.63KK319 pKa = 10.4NEE321 pKa = 4.02TGTRR325 pKa = 11.84LFYY328 pKa = 11.12NNHH331 pKa = 5.8FPNYY335 pKa = 9.53LDD337 pKa = 3.57SDD339 pKa = 4.28EE340 pKa = 5.2IGAGNLLIYY349 pKa = 10.43MNGNNGSQQQSHH361 pKa = 5.75VYY363 pKa = 9.57EE364 pKa = 4.58LNLPDD369 pKa = 5.39SFTLLPEE376 pKa = 4.34NDD378 pKa = 3.79NEE380 pKa = 4.21PTIEE384 pKa = 4.06WEE386 pKa = 4.11FTDD389 pKa = 4.32AEE391 pKa = 4.65LYY393 pKa = 10.8SPIVSGAVRR402 pKa = 11.84LPNGNTLIAEE412 pKa = 4.11GRR414 pKa = 11.84YY415 pKa = 9.91GYY417 pKa = 10.09WEE419 pKa = 4.01VTEE422 pKa = 4.23SGEE425 pKa = 4.62VVWLFEE431 pKa = 4.32GNKK434 pKa = 9.96LFWRR438 pKa = 11.84GYY440 pKa = 9.99SYY442 pKa = 11.23PKK444 pKa = 10.06DD445 pKa = 3.61HH446 pKa = 7.29PGVLLLEE453 pKa = 4.76LNN455 pKa = 3.91

Molecular weight: 51.79 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A4S8RUP1|A0A4S8RUP1_9FLAO Ferredoxin--NADP reductase OS=Muricauda alvinocaridis OX=2530200 GN=EZV76_04575 PE=3 SV=1
MM1 pKa = 7.75KK2 pKa = 10.5YY3 pKa = 10.47SPLWRR8 pKa = 11.84ILWSRR13 pKa = 11.84FRR15 pKa = 11.84FPKK18 pKa = 10.0MPLQLRR24 pKa = 11.84SGVWLKK30 pKa = 10.67IPPICHH36 pKa = 6.4FDD38 pKa = 3.6MRR40 pKa = 11.84CGTLTEE46 pKa = 4.92KK47 pKa = 10.39SHH49 pKa = 5.99QLIISHH55 pKa = 6.29SSFGYY60 pKa = 9.13SQDD63 pKa = 3.48RR64 pKa = 11.84ARR66 pKa = 11.84NDD68 pKa = 3.27KK69 pKa = 10.81KK70 pKa = 10.9NSKK73 pKa = 9.94

Molecular weight: 8.75 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

3339

0

3339

1128126

18

4754

337.9

38.01

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

6.581 ± 0.043

0.744 ± 0.014

5.758 ± 0.039

6.841 ± 0.039

5.101 ± 0.032

6.987 ± 0.042

1.959 ± 0.024

7.085 ± 0.039

7.129 ± 0.059

9.485 ± 0.05

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.436 ± 0.025

5.395 ± 0.043

3.66 ± 0.028

3.599 ± 0.023

3.773 ± 0.031

6.272 ± 0.034

5.614 ± 0.051

6.56 ± 0.032

1.136 ± 0.018

3.869 ± 0.027
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski