Arthrobacter phage Waltz

Taxonomy: Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Laroyevirus; unclassified Laroyevirus

Average proteome isoelectric point is 6.43

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 96 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A2H4PCD6|A0A2H4PCD6_9CAUD ParB domain-containing protein OS=Arthrobacter phage Waltz OX=2047828 GN=SEA_WALTZ_7 PE=4 SV=1
MM1 pKa = 7.33SRR3 pKa = 11.84YY4 pKa = 7.61EE5 pKa = 4.43TITDD9 pKa = 3.72LTVHH13 pKa = 6.47NLTVLGDD20 pKa = 3.49VTLPDD25 pKa = 3.52GTIPEE30 pKa = 4.6PATVEE35 pKa = 3.87AVEE38 pKa = 4.5PVQAPAPLPEE48 pKa = 4.98KK49 pKa = 10.22LTMAALGDD57 pKa = 3.93YY58 pKa = 11.11LEE60 pKa = 5.02ALTGALVLAGVLKK73 pKa = 10.51AYY75 pKa = 8.17EE76 pKa = 4.37AAPEE80 pKa = 4.2APEE83 pKa = 4.33GAADD87 pKa = 4.02GAGEE91 pKa = 3.94

Molecular weight: 9.27 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A2H4PCW1|A0A2H4PCW1_9CAUD Major tail protein OS=Arthrobacter phage Waltz OX=2047828 GN=SEA_WALTZ_62 PE=4 SV=1
MM1 pKa = 6.48TAKK4 pKa = 9.82TATRR8 pKa = 11.84TTAHH12 pKa = 5.15VVNRR16 pKa = 11.84TRR18 pKa = 11.84AEE20 pKa = 3.97AKK22 pKa = 9.91RR23 pKa = 11.84LSGSTALTARR33 pKa = 11.84MEE35 pKa = 4.3CAACDD40 pKa = 4.04SEE42 pKa = 5.94SPWTPPAFAEE52 pKa = 4.35AARR55 pKa = 11.84ADD57 pKa = 4.02HH58 pKa = 6.16VCPGRR63 pKa = 11.84RR64 pKa = 11.84PGGRR68 pKa = 11.84RR69 pKa = 11.84RR70 pKa = 11.84KK71 pKa = 9.77QVDD74 pKa = 3.37SFF76 pKa = 3.87

Molecular weight: 8.23 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

96

0

96

17863

30

1030

186.1

20.24

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

11.935 ± 0.401

0.733 ± 0.11

5.912 ± 0.221

6.018 ± 0.285

2.62 ± 0.202

8.386 ± 0.398

1.959 ± 0.189

4.546 ± 0.213

4.277 ± 0.19

7.541 ± 0.176

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.581 ± 0.124

3.185 ± 0.164

5.805 ± 0.23

3.689 ± 0.217

6.298 ± 0.382

5.285 ± 0.246

7.166 ± 0.235

7.518 ± 0.24

1.864 ± 0.111

2.682 ± 0.196
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski