Mesorhizobium hungaricum

Taxonomy: cellular organisms; Bacteria; Proteobacteria; Alphaproteobacteria; Hyphomicrobiales; Phyllobacteriaceae; Mesorhizobium

Average proteome isoelectric point is 6.68

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 5848 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A1C2DS55|A0A1C2DS55_9RHIZ Uncharacterized protein OS=Mesorhizobium hungaricum OX=1566387 GN=QV13_12710 PE=4 SV=1
MM1 pKa = 7.9PDD3 pKa = 3.47DD4 pKa = 4.04TEE6 pKa = 4.6HH7 pKa = 7.27LVTACADD14 pKa = 3.59FASKK18 pKa = 10.54HH19 pKa = 6.29GIDD22 pKa = 4.62AMLDD26 pKa = 3.51VLAGVYY32 pKa = 7.89QVYY35 pKa = 10.41APLSEE40 pKa = 4.42DD41 pKa = 3.61VAIKK45 pKa = 10.2IAWDD49 pKa = 3.19IASGSDD55 pKa = 3.21VSVVTEE61 pKa = 4.08IDD63 pKa = 3.15SDD65 pKa = 4.24GNATHH70 pKa = 6.6HH71 pKa = 5.79TVQQ74 pKa = 3.9

Molecular weight: 7.83 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A1C2DEH6|A0A1C2DEH6_9RHIZ ParB domain-containing protein OS=Mesorhizobium hungaricum OX=1566387 GN=QV13_26925 PE=4 SV=1
MM1 pKa = 7.35KK2 pKa = 9.43RR3 pKa = 11.84TYY5 pKa = 10.27QPSKK9 pKa = 9.73LVRR12 pKa = 11.84KK13 pKa = 9.15RR14 pKa = 11.84RR15 pKa = 11.84HH16 pKa = 4.42GFRR19 pKa = 11.84ARR21 pKa = 11.84MATKK25 pKa = 10.11GGRR28 pKa = 11.84GVVAARR34 pKa = 11.84RR35 pKa = 11.84NRR37 pKa = 11.84GRR39 pKa = 11.84KK40 pKa = 9.03RR41 pKa = 11.84LSAA44 pKa = 4.03

Molecular weight: 5.12 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

5848

0

5848

1817757

27

3304

310.8

33.69

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

12.611 ± 0.048

0.774 ± 0.01

5.614 ± 0.028

5.522 ± 0.03

3.881 ± 0.021

8.638 ± 0.038

1.961 ± 0.015

5.277 ± 0.021

3.678 ± 0.028

9.98 ± 0.042

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.47 ± 0.016

2.708 ± 0.021

5.01 ± 0.032

3.053 ± 0.021

6.849 ± 0.036

5.443 ± 0.024

5.359 ± 0.032

7.545 ± 0.025

1.361 ± 0.013

2.266 ± 0.017
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski