Beluga whale coronavirus SW1

Taxonomy: Viruses; Riboviria; Orthornavirae; Pisuviricota; Pisoniviricetes; Nidovirales; Cornidovirineae; Coronaviridae; Orthocoronavirinae; Gammacoronavirus; Cegacovirus

Average proteome isoelectric point is 6.49

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 14 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|B2BW42|B2BW42_9GAMC ORF 9 OS=Beluga whale coronavirus SW1 OX=694015 PE=4 SV=1
MM1 pKa = 6.99YY2 pKa = 10.45VVLLALFLYY11 pKa = 10.85LLVNEE16 pKa = 4.45EE17 pKa = 4.1TPAIINGLSIIVFILLLEE35 pKa = 4.84EE36 pKa = 4.44CDD38 pKa = 3.83KK39 pKa = 10.72MHH41 pKa = 7.63PLYY44 pKa = 10.31CYY46 pKa = 10.36CRR48 pKa = 11.84MIEE51 pKa = 3.97IPGDD55 pKa = 3.52GFLNN59 pKa = 3.77

Molecular weight: 6.79 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|B2BW38|B2BW38_9GAMC ORF 5c OS=Beluga whale coronavirus SW1 OX=694015 PE=4 SV=1
MM1 pKa = 7.67GNFLSNIFTVQVSTNHH17 pKa = 5.89NAHH20 pKa = 5.91VVSAGHH26 pKa = 6.76DD27 pKa = 3.29ASLAASASNMQMHH40 pKa = 6.65FSVTLVITSMLMFVIIIVMFLMLCSIRR67 pKa = 11.84RR68 pKa = 11.84HH69 pKa = 5.47LMPNRR74 pKa = 11.84GRR76 pKa = 11.84SLIGRR81 pKa = 11.84ATRR84 pKa = 11.84AIRR87 pKa = 11.84RR88 pKa = 11.84TFKK91 pKa = 10.57SRR93 pKa = 11.84KK94 pKa = 9.5GGGKK98 pKa = 10.0DD99 pKa = 3.34MEE101 pKa = 4.42EE102 pKa = 3.89LQPLNNQIKK111 pKa = 9.65HH112 pKa = 5.79SSVEE116 pKa = 4.1FKK118 pKa = 11.13KK119 pKa = 10.86NLLTMINEE127 pKa = 3.76VDD129 pKa = 3.62KK130 pKa = 11.44IEE132 pKa = 4.37ASRR135 pKa = 11.84KK136 pKa = 8.58EE137 pKa = 3.84EE138 pKa = 3.9PFYY141 pKa = 11.39EE142 pKa = 4.47EE143 pKa = 4.71IKK145 pKa = 10.69LKK147 pKa = 10.64PSTKK151 pKa = 9.74KK152 pKa = 10.41YY153 pKa = 10.01RR154 pKa = 11.84APQPPKK160 pKa = 10.03ISSTPIYY167 pKa = 9.59INHH170 pKa = 6.13VGG172 pKa = 3.18

Molecular weight: 19.44 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

14

0

14

14128

59

6663

1009.1

112.58

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

7.106 ± 0.333

2.803 ± 0.184

5.514 ± 0.211

5.627 ± 0.307

4.891 ± 0.327

6.689 ± 0.219

1.925 ± 0.211

5.21 ± 0.401

6.264 ± 0.366

8.175 ± 0.194

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.492 ± 0.117

5.153 ± 0.369

3.928 ± 0.201

3.157 ± 0.237

3.539 ± 0.348

7.106 ± 0.199

5.33 ± 0.24

9.11 ± 0.602

1.097 ± 0.103

4.884 ± 0.177
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski