Fusobacterium mortiferum ATCC 9817

Taxonomy: cellular organisms; Bacteria; Fusobacteria; Fusobacteriia; Fusobacteriales; Fusobacteriaceae; Fusobacterium; Fusobacterium mortiferum

Average proteome isoelectric point is 6.6

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 2532 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|C3WFT2|C3WFT2_FUSMR 30S ribosomal protein S6 OS=Fusobacterium mortiferum ATCC 9817 OX=469616 GN=rpsF PE=3 SV=1
MM1 pKa = 7.59KK2 pKa = 10.23KK3 pKa = 10.36YY4 pKa = 9.22ICKK7 pKa = 9.46VCGYY11 pKa = 9.51EE12 pKa = 3.84YY13 pKa = 10.89DD14 pKa = 3.92PAVGDD19 pKa = 3.55VDD21 pKa = 3.84NGVAAGTAWEE31 pKa = 4.84DD32 pKa = 3.73VPEE35 pKa = 4.74DD36 pKa = 4.08WLCPLCGVGKK46 pKa = 10.4DD47 pKa = 3.48EE48 pKa = 5.58FEE50 pKa = 4.12PAEE53 pKa = 4.01

Molecular weight: 5.78 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|C3WBM1|C3WBM1_FUSMR Ribosomal protein S12 methylthiotransferase RimO OS=Fusobacterium mortiferum ATCC 9817 OX=469616 GN=rimO PE=3 SV=1
MM1 pKa = 7.77IIKK4 pKa = 10.26KK5 pKa = 9.73ILSFLFFIIFFIGCSSIGIDD25 pKa = 3.56KK26 pKa = 10.88NEE28 pKa = 4.61KK29 pKa = 7.42ISKK32 pKa = 8.47YY33 pKa = 8.38FTMGEE38 pKa = 3.86ATYY41 pKa = 10.81SSTAIRR47 pKa = 11.84RR48 pKa = 11.84GIKK51 pKa = 8.22NTPSWSEE58 pKa = 3.77RR59 pKa = 11.84TNIRR63 pKa = 11.84YY64 pKa = 6.62TARR67 pKa = 11.84RR68 pKa = 11.84LDD70 pKa = 3.71EE71 pKa = 3.81VRR73 pKa = 11.84EE74 pKa = 3.92ILGRR78 pKa = 11.84PVVVSSWFRR87 pKa = 11.84SARR90 pKa = 11.84LNRR93 pKa = 11.84AVGGSSSSGHH103 pKa = 5.74RR104 pKa = 11.84KK105 pKa = 9.42GMAVDD110 pKa = 4.57IILKK114 pKa = 10.16KK115 pKa = 10.71GSAGKK120 pKa = 10.17KK121 pKa = 8.03EE122 pKa = 3.85YY123 pKa = 10.67EE124 pKa = 3.9RR125 pKa = 11.84VKK127 pKa = 11.05NRR129 pKa = 11.84LEE131 pKa = 4.43SFDD134 pKa = 3.44QLIYY138 pKa = 10.04YY139 pKa = 7.71PRR141 pKa = 11.84RR142 pKa = 11.84GHH144 pKa = 5.81LHH146 pKa = 6.53IGFKK150 pKa = 9.74QYY152 pKa = 10.66RR153 pKa = 11.84FQEE156 pKa = 4.35RR157 pKa = 11.84KK158 pKa = 8.52QVMVRR163 pKa = 11.84YY164 pKa = 9.05NN165 pKa = 2.95

Molecular weight: 19.24 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

2532

0

2532

778824

30

1602

307.6

34.89

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

5.456 ± 0.059

0.941 ± 0.02

5.127 ± 0.041

8.386 ± 0.067

4.75 ± 0.04

6.83 ± 0.049

1.234 ± 0.019

9.759 ± 0.052

9.485 ± 0.057

9.35 ± 0.048

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.572 ± 0.022

5.741 ± 0.051

2.779 ± 0.029

2.208 ± 0.02

3.585 ± 0.036

5.653 ± 0.037

4.826 ± 0.035

6.341 ± 0.042

0.691 ± 0.014

4.286 ± 0.037
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski