Amino acid dipepetide frequency for Capybara microvirus Cap1_SP_95

Apart from single amino acid frequencies one can also calculate so called amino acid dipeptide frequency.

There is 400 possibilites (441 if we consider Xaa as additional 21st amino acid representing all non-standard or unknown amino acids). Thus, if the dipeptides would be present randomly in proteins each amino acid dipeptide should be present with 0.25% frequency. As it is not the case in the nature, for better visablity all more than expected dipepetides are marked by red, and those which are underrepresented are marked by blue in the table.

All values are presented as per milles (‰), therefore need to be multiplied by 10-3.

For more information see sequence space article on Wikipedia.

AlaCysAspGluPheGlyHisIleLysLeuMetAsnProGlnArgSerThrValTrpTyrXaa
Ala
1.97AlaAla: 1.97 ± 2.215
3.283AlaCys: 3.283 ± 1.663
5.253AlaAsp: 5.253 ± 1.536
4.596AlaGlu: 4.596 ± 1.692
4.596AlaPhe: 4.596 ± 1.331
4.596AlaGly: 4.596 ± 1.97
2.626AlaHis: 2.626 ± 1.419
0.657AlaIle: 0.657 ± 0.975
3.283AlaLys: 3.283 ± 1.471
5.909AlaLeu: 5.909 ± 1.343
0.0AlaMet: 0.0 ± 0.818
1.97AlaAsn: 1.97 ± 1.105
4.596AlaPro: 4.596 ± 1.143
1.313AlaGln: 1.313 ± 0.956
5.253AlaArg: 5.253 ± 0.786
9.192AlaSer: 9.192 ± 4.809
3.283AlaThr: 3.283 ± 1.37
3.283AlaVal: 3.283 ± 0.955
1.313AlaTrp: 1.313 ± 0.607
5.253AlaTyr: 5.253 ± 2.308
0.0AlaXaa: 0.0 ± 0.0
Cys
0.0CysAla: 0.0 ± 0.0
0.0CysCys: 0.0 ± 0.0
3.283CysAsp: 3.283 ± 0.863
0.0CysGlu: 0.0 ± 0.0
0.657CysPhe: 0.657 ± 0.975
1.97CysGly: 1.97 ± 1.105
0.0CysHis: 0.0 ± 0.0
0.657CysIle: 0.657 ± 0.904
1.97CysLys: 1.97 ± 0.914
1.313CysLeu: 1.313 ± 0.995
0.657CysMet: 0.657 ± 0.589
0.0CysAsn: 0.0 ± 0.0
0.0CysPro: 0.0 ± 0.0
0.0CysGln: 0.0 ± 0.0
0.657CysArg: 0.657 ± 0.589
0.657CysSer: 0.657 ± 0.589
0.0CysThr: 0.0 ± 0.0
0.657CysVal: 0.657 ± 0.589
0.0CysTrp: 0.0 ± 0.0
1.313CysTyr: 1.313 ± 1.03
0.0CysXaa: 0.0 ± 0.0
Asp
2.626AspAla: 2.626 ± 1.419
0.657AspCys: 0.657 ± 0.589
3.94AspAsp: 3.94 ± 1.385
3.283AspGlu: 3.283 ± 1.385
4.596AspPhe: 4.596 ± 1.336
2.626AspGly: 2.626 ± 0.97
0.0AspHis: 0.0 ± 0.0
2.626AspIle: 2.626 ± 1.014
4.596AspLys: 4.596 ± 1.472
7.879AspLeu: 7.879 ± 1.356
1.313AspMet: 1.313 ± 0.625
4.596AspAsn: 4.596 ± 1.965
0.657AspPro: 0.657 ± 0.589
0.0AspGln: 0.0 ± 0.0
1.313AspArg: 1.313 ± 0.625
13.132AspSer: 13.132 ± 2.454
2.626AspThr: 2.626 ± 0.97
3.94AspVal: 3.94 ± 1.201
0.0AspTrp: 0.0 ± 0.0
7.223AspTyr: 7.223 ± 2.211
0.0AspXaa: 0.0 ± 0.0
Glu
3.94GluAla: 3.94 ± 1.458
0.657GluCys: 0.657 ± 0.589
1.97GluAsp: 1.97 ± 0.97
2.626GluGlu: 2.626 ± 1.154
3.94GluPhe: 3.94 ± 1.057
1.97GluGly: 1.97 ± 0.866
0.657GluHis: 0.657 ± 0.589
4.596GluIle: 4.596 ± 1.574
5.253GluLys: 5.253 ± 1.038
5.253GluLeu: 5.253 ± 1.793
3.283GluMet: 3.283 ± 1.52
4.596GluAsn: 4.596 ± 1.288
0.0GluPro: 0.0 ± 0.0
0.657GluGln: 0.657 ± 0.738
1.97GluArg: 1.97 ± 1.289
1.97GluSer: 1.97 ± 0.866
1.97GluThr: 1.97 ± 0.807
3.283GluVal: 3.283 ± 1.885
1.313GluTrp: 1.313 ± 1.181
2.626GluTyr: 2.626 ± 1.484
0.0GluXaa: 0.0 ± 0.0
Phe
1.97PheAla: 1.97 ± 1.289
0.0PheCys: 0.0 ± 0.0
5.253PheAsp: 5.253 ± 1.503
2.626PheGlu: 2.626 ± 0.593
5.909PhePhe: 5.909 ± 1.354
4.596PheGly: 4.596 ± 1.331
0.657PheHis: 0.657 ± 0.904
3.283PheIle: 3.283 ± 2.295
2.626PheLys: 2.626 ± 0.923
2.626PheLeu: 2.626 ± 0.593
1.97PheMet: 1.97 ± 1.052
3.283PheAsn: 3.283 ± 1.029
4.596PhePro: 4.596 ± 1.988
1.313PheGln: 1.313 ± 0.853
2.626PheArg: 2.626 ± 1.498
1.313PheSer: 1.313 ± 0.853
3.283PheThr: 3.283 ± 1.713
3.283PheVal: 3.283 ± 1.662
0.0PheTrp: 0.0 ± 0.0
3.283PheTyr: 3.283 ± 2.097
0.0PheXaa: 0.0 ± 0.0
Gly
5.909GlyAla: 5.909 ± 1.392
0.0GlyCys: 0.0 ± 0.0
3.94GlyAsp: 3.94 ± 1.371
1.313GlyGlu: 1.313 ± 0.787
2.626GlyPhe: 2.626 ± 1.641
3.283GlyGly: 3.283 ± 0.918
0.657GlyHis: 0.657 ± 0.457
3.283GlyIle: 3.283 ± 1.713
2.626GlyLys: 2.626 ± 0.97
8.536GlyLeu: 8.536 ± 1.886
0.657GlyMet: 0.657 ± 0.589
3.94GlyAsn: 3.94 ± 1.377
1.313GlyPro: 1.313 ± 0.625
1.97GlyGln: 1.97 ± 1.105
1.313GlyArg: 1.313 ± 0.965
6.566GlySer: 6.566 ± 2.723
2.626GlyThr: 2.626 ± 1.154
3.283GlyVal: 3.283 ± 1.258
0.0GlyTrp: 0.0 ± 0.0
3.283GlyTyr: 3.283 ± 1.72
0.0GlyXaa: 0.0 ± 0.0
His
1.97HisAla: 1.97 ± 0.898
0.0HisCys: 0.0 ± 0.0
0.657HisAsp: 0.657 ± 0.457
0.0HisGlu: 0.0 ± 0.0
1.97HisPhe: 1.97 ± 0.853
3.283HisGly: 3.283 ± 1.591
0.0HisHis: 0.0 ± 0.0
0.657HisIle: 0.657 ± 0.975
1.313HisLys: 1.313 ± 1.157
1.97HisLeu: 1.97 ± 1.697
0.0HisMet: 0.0 ± 0.0
1.313HisAsn: 1.313 ± 0.787
0.0HisPro: 0.0 ± 0.0
1.313HisGln: 1.313 ± 0.625
0.0HisArg: 0.0 ± 0.0
0.657HisSer: 0.657 ± 0.589
0.0HisThr: 0.0 ± 0.0
0.0HisVal: 0.0 ± 0.0
0.0HisTrp: 0.0 ± 0.0
0.657HisTyr: 0.657 ± 0.589
0.0HisXaa: 0.0 ± 0.0
Ile
5.909IleAla: 5.909 ± 1.609
0.657IleCys: 0.657 ± 0.589
5.253IleAsp: 5.253 ± 2.406
1.97IleGlu: 1.97 ± 1.137
0.657IlePhe: 0.657 ± 0.457
0.657IleGly: 0.657 ± 0.457
1.313IleHis: 1.313 ± 0.607
1.97IleIle: 1.97 ± 1.37
1.97IleLys: 1.97 ± 1.363
1.97IleLeu: 1.97 ± 1.094
1.313IleMet: 1.313 ± 0.913
2.626IleAsn: 2.626 ± 1.34
5.253IlePro: 5.253 ± 2.044
0.657IleGln: 0.657 ± 0.589
1.97IleArg: 1.97 ± 0.807
3.283IleSer: 3.283 ± 1.113
4.596IleThr: 4.596 ± 1.914
2.626IleVal: 2.626 ± 1.339
0.0IleTrp: 0.0 ± 0.0
2.626IleTyr: 2.626 ± 1.688
0.0IleXaa: 0.0 ± 0.0
Lys
2.626LysAla: 2.626 ± 1.72
0.0LysCys: 0.0 ± 0.0
2.626LysAsp: 2.626 ± 1.254
5.909LysGlu: 5.909 ± 2.143
3.283LysPhe: 3.283 ± 0.655
2.626LysGly: 2.626 ± 0.999
0.657LysHis: 0.657 ± 0.975
3.94LysIle: 3.94 ± 1.618
3.283LysLys: 3.283 ± 1.828
3.94LysLeu: 3.94 ± 0.799
1.97LysMet: 1.97 ± 0.541
3.94LysAsn: 3.94 ± 0.927
1.97LysPro: 1.97 ± 0.898
1.313LysGln: 1.313 ± 0.787
3.283LysArg: 3.283 ± 1.292
3.94LysSer: 3.94 ± 1.458
1.97LysThr: 1.97 ± 0.853
2.626LysVal: 2.626 ± 1.622
0.0LysTrp: 0.0 ± 0.0
2.626LysTyr: 2.626 ± 1.341
0.0LysXaa: 0.0 ± 0.0
Leu
5.253LeuAla: 5.253 ± 1.585
0.657LeuCys: 0.657 ± 0.975
5.909LeuAsp: 5.909 ± 1.798
4.596LeuGlu: 4.596 ± 2.216
3.283LeuPhe: 3.283 ± 1.591
6.566LeuGly: 6.566 ± 2.192
0.0LeuHis: 0.0 ± 0.0
4.596LeuIle: 4.596 ± 0.669
1.313LeuLys: 1.313 ± 0.787
1.97LeuLeu: 1.97 ± 0.97
0.0LeuMet: 0.0 ± 0.0
5.253LeuAsn: 5.253 ± 1.54
7.879LeuPro: 7.879 ± 3.277
5.909LeuGln: 5.909 ± 2.192
3.94LeuArg: 3.94 ± 2.818
11.162LeuSer: 11.162 ± 1.658
5.253LeuThr: 5.253 ± 1.799
2.626LeuVal: 2.626 ± 0.593
2.626LeuTrp: 2.626 ± 1.827
3.283LeuTyr: 3.283 ± 1.591
0.0LeuXaa: 0.0 ± 0.0
Met
2.626MetAla: 2.626 ± 1.129
1.313MetCys: 1.313 ± 1.512
0.657MetAsp: 0.657 ± 0.457
0.657MetGlu: 0.657 ± 0.589
0.657MetPhe: 0.657 ± 0.738
1.313MetGly: 1.313 ± 0.625
0.0MetHis: 0.0 ± 0.0
1.313MetIle: 1.313 ± 0.853
1.97MetLys: 1.97 ± 1.086
0.0MetLeu: 0.0 ± 0.0
0.0MetMet: 0.0 ± 0.0
1.97MetAsn: 1.97 ± 0.526
1.97MetPro: 1.97 ± 0.807
0.657MetGln: 0.657 ± 0.589
0.657MetArg: 0.657 ± 0.457
3.283MetSer: 3.283 ± 0.918
0.657MetThr: 0.657 ± 0.589
1.313MetVal: 1.313 ± 1.178
0.0MetTrp: 0.0 ± 0.0
1.97MetTyr: 1.97 ± 0.866
0.0MetXaa: 0.0 ± 0.0
Asn
3.283AsnAla: 3.283 ± 1.37
1.313AsnCys: 1.313 ± 0.607
1.313AsnAsp: 1.313 ± 1.063
2.626AsnGlu: 2.626 ± 1.424
3.283AsnPhe: 3.283 ± 1.385
6.566AsnGly: 6.566 ± 2.97
0.657AsnHis: 0.657 ± 0.589
1.97AsnIle: 1.97 ± 0.988
2.626AsnLys: 2.626 ± 1.565
5.909AsnLeu: 5.909 ± 2.633
1.313AsnMet: 1.313 ± 0.607
5.253AsnAsn: 5.253 ± 0.965
3.283AsnPro: 3.283 ± 1.258
0.657AsnGln: 0.657 ± 0.738
2.626AsnArg: 2.626 ± 0.593
5.253AsnSer: 5.253 ± 1.883
0.657AsnThr: 0.657 ± 0.738
3.94AsnVal: 3.94 ± 2.936
0.657AsnTrp: 0.657 ± 0.589
3.94AsnTyr: 3.94 ± 1.59
0.0AsnXaa: 0.0 ± 0.0
Pro
1.97ProAla: 1.97 ± 0.988
0.0ProCys: 0.0 ± 0.0
1.97ProAsp: 1.97 ± 1.01
0.657ProGlu: 0.657 ± 0.77
3.94ProPhe: 3.94 ± 1.024
0.657ProGly: 0.657 ± 0.457
1.97ProHis: 1.97 ± 0.844
3.283ProIle: 3.283 ± 0.918
1.97ProLys: 1.97 ± 1.137
7.223ProLeu: 7.223 ± 2.003
0.657ProMet: 0.657 ± 0.738
1.313ProAsn: 1.313 ± 0.625
0.657ProPro: 0.657 ± 0.738
4.596ProGln: 4.596 ± 1.143
0.657ProArg: 0.657 ± 0.589
5.253ProSer: 5.253 ± 1.046
6.566ProThr: 6.566 ± 2.713
4.596ProVal: 4.596 ± 1.794
0.0ProTrp: 0.0 ± 0.0
1.313ProTyr: 1.313 ± 0.913
0.0ProXaa: 0.0 ± 0.0
Gln
2.626GlnAla: 2.626 ± 1.154
0.657GlnCys: 0.657 ± 0.589
0.657GlnAsp: 0.657 ± 0.589
1.313GlnGlu: 1.313 ± 1.063
2.626GlnPhe: 2.626 ± 0.593
1.97GlnGly: 1.97 ± 0.898
1.313GlnHis: 1.313 ± 0.995
1.97GlnIle: 1.97 ± 1.172
1.97GlnLys: 1.97 ± 1.408
0.0GlnLeu: 0.0 ± 0.0
0.657GlnMet: 0.657 ± 0.738
2.626GlnAsn: 2.626 ± 0.926
0.0GlnPro: 0.0 ± 0.0
1.313GlnGln: 1.313 ± 1.477
3.283GlnArg: 3.283 ± 1.834
2.626GlnSer: 2.626 ± 1.014
1.313GlnThr: 1.313 ± 0.913
1.97GlnVal: 1.97 ± 0.866
1.97GlnTrp: 1.97 ± 1.408
1.313GlnTyr: 1.313 ± 0.607
0.0GlnXaa: 0.0 ± 0.0
Arg
3.94ArgAla: 3.94 ± 2.151
0.0ArgCys: 0.0 ± 0.0
2.626ArgAsp: 2.626 ± 1.154
4.596ArgGlu: 4.596 ± 3.29
3.94ArgPhe: 3.94 ± 0.929
1.313ArgGly: 1.313 ± 0.853
1.313ArgHis: 1.313 ± 0.913
1.313ArgIle: 1.313 ± 1.03
4.596ArgLys: 4.596 ± 1.997
3.94ArgLeu: 3.94 ± 2.024
0.657ArgMet: 0.657 ± 0.457
1.97ArgAsn: 1.97 ± 0.526
1.97ArgPro: 1.97 ± 1.105
3.283ArgGln: 3.283 ± 1.258
3.94ArgArg: 3.94 ± 1.733
2.626ArgSer: 2.626 ± 1.687
0.657ArgThr: 0.657 ± 0.457
4.596ArgVal: 4.596 ± 1.646
0.657ArgTrp: 0.657 ± 0.904
1.97ArgTyr: 1.97 ± 0.914
0.0ArgXaa: 0.0 ± 0.0
Ser
10.506SerAla: 10.506 ± 2.496
0.0SerCys: 0.0 ± 0.0
7.223SerAsp: 7.223 ± 2.655
7.223SerGlu: 7.223 ± 2.075
3.283SerPhe: 3.283 ± 1.029
6.566SerGly: 6.566 ± 1.968
0.657SerHis: 0.657 ± 0.457
3.94SerIle: 3.94 ± 1.371
3.94SerLys: 3.94 ± 1.057
9.192SerLeu: 9.192 ± 2.075
1.313SerMet: 1.313 ± 0.913
5.909SerAsn: 5.909 ± 2.441
4.596SerPro: 4.596 ± 1.419
1.313SerGln: 1.313 ± 0.607
3.94SerArg: 3.94 ± 1.136
9.849SerSer: 9.849 ± 4.74
4.596SerThr: 4.596 ± 3.29
7.223SerVal: 7.223 ± 2.772
1.97SerTrp: 1.97 ± 1.177
4.596SerTyr: 4.596 ± 0.962
0.0SerXaa: 0.0 ± 0.0
Thr
4.596ThrAla: 4.596 ± 1.939
0.0ThrCys: 0.0 ± 0.0
3.94ThrAsp: 3.94 ± 1.429
2.626ThrGlu: 2.626 ± 0.593
1.97ThrPhe: 1.97 ± 0.988
3.283ThrGly: 3.283 ± 1.096
0.657ThrHis: 0.657 ± 0.77
2.626ThrIle: 2.626 ± 0.886
2.626ThrLys: 2.626 ± 0.999
3.94ThrLeu: 3.94 ± 1.796
1.313ThrMet: 1.313 ± 0.787
0.657ThrAsn: 0.657 ± 0.457
2.626ThrPro: 2.626 ± 1.445
0.657ThrGln: 0.657 ± 0.457
1.97ThrArg: 1.97 ± 0.844
5.909ThrSer: 5.909 ± 2.422
3.283ThrThr: 3.283 ± 0.918
2.626ThrVal: 2.626 ± 1.498
0.0ThrTrp: 0.0 ± 0.0
3.283ThrTyr: 3.283 ± 1.713
0.0ThrXaa: 0.0 ± 0.0
Val
7.223ValAla: 7.223 ± 3.657
3.283ValCys: 3.283 ± 0.863
5.253ValAsp: 5.253 ± 2.157
3.94ValGlu: 3.94 ± 1.522
1.313ValPhe: 1.313 ± 0.995
1.313ValGly: 1.313 ± 0.759
0.657ValHis: 0.657 ± 0.904
1.313ValIle: 1.313 ± 0.607
0.657ValLys: 0.657 ± 0.975
4.596ValLeu: 4.596 ± 1.867
3.283ValMet: 3.283 ± 1.891
2.626ValAsn: 2.626 ± 1.667
4.596ValPro: 4.596 ± 1.703
1.313ValGln: 1.313 ± 1.178
6.566ValArg: 6.566 ± 1.717
2.626ValSer: 2.626 ± 1.761
1.97ValThr: 1.97 ± 0.898
3.94ValVal: 3.94 ± 1.618
0.0ValTrp: 0.0 ± 0.0
2.626ValTyr: 2.626 ± 1.289
0.0ValXaa: 0.0 ± 0.0
Trp
0.0TrpAla: 0.0 ± 0.0
0.0TrpCys: 0.0 ± 0.0
0.657TrpAsp: 0.657 ± 0.457
1.313TrpGlu: 1.313 ± 0.625
0.0TrpPhe: 0.0 ± 0.0
0.0TrpGly: 0.0 ± 0.0
0.657TrpHis: 0.657 ± 0.904
0.657TrpIle: 0.657 ± 0.589
1.313TrpLys: 1.313 ± 0.625
1.97TrpLeu: 1.97 ± 0.526
0.0TrpMet: 0.0 ± 0.0
0.0TrpAsn: 0.0 ± 0.0
0.0TrpPro: 0.0 ± 0.0
1.313TrpGln: 1.313 ± 0.787
0.657TrpArg: 0.657 ± 0.589
1.313TrpSer: 1.313 ± 0.995
0.657TrpThr: 0.657 ± 0.457
0.0TrpVal: 0.0 ± 0.0
0.0TrpTrp: 0.0 ± 0.0
0.0TrpTyr: 0.0 ± 0.0
0.0TrpXaa: 0.0 ± 0.0
Tyr
3.94TyrAla: 3.94 ± 1.378
1.313TyrCys: 1.313 ± 1.03
5.253TyrAsp: 5.253 ± 1.799
0.657TyrGlu: 0.657 ± 0.457
1.97TyrPhe: 1.97 ± 1.026
1.97TyrGly: 1.97 ± 1.396
1.313TyrHis: 1.313 ± 0.607
2.626TyrIle: 2.626 ± 0.923
2.626TyrLys: 2.626 ± 0.923
3.94TyrLeu: 3.94 ± 1.543
1.97TyrMet: 1.97 ± 0.898
3.283TyrAsn: 3.283 ± 1.723
3.283TyrPro: 3.283 ± 1.295
2.626TyrGln: 2.626 ± 1.154
3.283TyrArg: 3.283 ± 1.463
7.223TyrSer: 7.223 ± 1.582
2.626TyrThr: 2.626 ± 1.641
3.283TyrVal: 3.283 ± 1.713
0.0TyrTrp: 0.0 ± 0.0
3.94TyrTyr: 3.94 ± 1.115
0.0TyrXaa: 0.0 ± 0.0
Xaa
0.0XaaAla: 0.0 ± 0.0
0.0XaaCys: 0.0 ± 0.0
0.0XaaAsp: 0.0 ± 0.0
0.0XaaGlu: 0.0 ± 0.0
0.0XaaPhe: 0.0 ± 0.0
0.0XaaGly: 0.0 ± 0.0
0.0XaaHis: 0.0 ± 0.0
0.0XaaIle: 0.0 ± 0.0
0.0XaaLys: 0.0 ± 0.0
0.0XaaLeu: 0.0 ± 0.0
0.0XaaMet: 0.0 ± 0.0
0.0XaaAsn: 0.0 ± 0.0
0.0XaaPro: 0.0 ± 0.0
0.0XaaGln: 0.0 ± 0.0
0.0XaaArg: 0.0 ± 0.0
0.0XaaSer: 0.0 ± 0.0
0.0XaaThr: 0.0 ± 0.0
0.0XaaVal: 0.0 ± 0.0
0.0XaaTrp: 0.0 ± 0.0
0.0XaaTyr: 0.0 ± 0.0
0.0XaaXaa: 0.0 ± 0.0
Statistics based on 6 proteins (1524 amino acids)

Note: The error has been estimated with the bootstraping (x100) at the protein level

Above dipeptide statistics (among other stats for this proteome) you can download from this CSV file
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski