Dysgonomonas mossii DSM 22836

Taxonomy: cellular organisms; Bacteria; FCB group; Bacteroidetes/Chlorobi group; Bacteroidetes; Bacteroidia; Bacteroidales; Dysgonomonadaceae; Dysgonomonas; Dysgonomonas mossii

Average proteome isoelectric point is 6.52

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 3424 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|F8WWB1|F8WWB1_9BACT PASTA domain-containing protein OS=Dysgonomonas mossii DSM 22836 OX=742767 GN=HMPREF9456_00080 PE=4 SV=1
MM1 pKa = 7.61SSDD4 pKa = 4.01KK5 pKa = 11.27DD6 pKa = 3.94LIQYY10 pKa = 10.67DD11 pKa = 3.41EE12 pKa = 5.2DD13 pKa = 4.37DD14 pKa = 3.62AVKK17 pKa = 10.63YY18 pKa = 8.68IQNYY22 pKa = 9.11LPQEE26 pKa = 4.24VKK28 pKa = 10.64GKK30 pKa = 10.44YY31 pKa = 10.08SSDD34 pKa = 3.58EE35 pKa = 3.55INYY38 pKa = 9.96IIDD41 pKa = 3.28IVYY44 pKa = 10.1EE45 pKa = 4.31FYY47 pKa = 10.9EE48 pKa = 4.21EE49 pKa = 3.84KK50 pKa = 10.97GYY52 pKa = 9.77MDD54 pKa = 4.45EE55 pKa = 5.56DD56 pKa = 3.93ADD58 pKa = 4.02EE59 pKa = 4.17NVIVDD64 pKa = 3.43IDD66 pKa = 3.61EE67 pKa = 4.87DD68 pKa = 4.62EE69 pKa = 4.21IVSYY73 pKa = 9.76VLKK76 pKa = 9.48NTKK79 pKa = 9.32KK80 pKa = 10.71DD81 pKa = 3.42KK82 pKa = 10.87INNFSAEE89 pKa = 4.54DD90 pKa = 3.32ISFIIQGEE98 pKa = 3.98IAYY101 pKa = 9.92CEE103 pKa = 3.9SLGIFEE109 pKa = 4.67

Molecular weight: 12.74 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|F8X552|F8X552_9BACT Uncharacterized protein OS=Dysgonomonas mossii DSM 22836 OX=742767 GN=HMPREF9456_03361 PE=4 SV=1
MM1 pKa = 8.0RR2 pKa = 11.84VRR4 pKa = 11.84QRR6 pKa = 11.84ASTTKK11 pKa = 9.91CNKK14 pKa = 9.68MKK16 pKa = 10.79DD17 pKa = 3.58KK18 pKa = 10.34LLKK21 pKa = 10.23RR22 pKa = 11.84IRR24 pKa = 11.84EE25 pKa = 3.75NWFIGISEE33 pKa = 4.58SEE35 pKa = 4.32TYY37 pKa = 10.63ILVQKK42 pKa = 10.5KK43 pKa = 10.04GLDD46 pKa = 3.22AGEE49 pKa = 4.34FCVSRR54 pKa = 11.84EE55 pKa = 3.96FYY57 pKa = 10.54IHH59 pKa = 6.84ILKK62 pKa = 10.69LYY64 pKa = 8.47GLCSDD69 pKa = 4.04ISWFIAYY76 pKa = 9.63RR77 pKa = 11.84HH78 pKa = 5.53FSKK81 pKa = 10.51LRR83 pKa = 11.84KK84 pKa = 9.19RR85 pKa = 11.84KK86 pKa = 7.28YY87 pKa = 8.73HH88 pKa = 6.84RR89 pKa = 11.84NRR91 pKa = 11.84QRR93 pKa = 11.84MRR95 pKa = 11.84QSLLNKK101 pKa = 9.94ISRR104 pKa = 3.83

Molecular weight: 12.72 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

3424

0

3424

1182442

29

2901

345.3

39.07

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

6.36 ± 0.039

0.945 ± 0.012

5.753 ± 0.031

6.336 ± 0.044

4.784 ± 0.029

6.465 ± 0.041

1.659 ± 0.018

8.106 ± 0.04

7.639 ± 0.038

8.973 ± 0.037

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.483 ± 0.017

5.727 ± 0.036

3.451 ± 0.019

3.339 ± 0.024

3.91 ± 0.023

6.674 ± 0.033

5.493 ± 0.031

6.138 ± 0.037

1.161 ± 0.017

4.605 ± 0.034
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski