Cycad leaf necrosis virus
Average proteome isoelectric point is 7.12
Get precalculated fractions of proteins
Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
All
Note: above files contain also dissociation constants (pKa)
Virtual 2D-PAGE plot for 3 proteins (isoelectric point calculated using IPC2_protein)
Get csv file with sequences according to given criteria:
* You can choose from 21 different methods for calculating isoelectric point
Summary statistics related to proteome-wise predictions
Protein with the lowest isoelectric point:
>tr|B5AK50|B5AK50_9VIRU Reverse transcriptase OS=Cycad leaf necrosis virus OX=549205 PE=4 SV=1
MM1 pKa = 7.07 SRR3 pKa = 11.84 SVGGASTSAQASGEE17 pKa = 4.15 PLVEE21 pKa = 4.22 DD22 pKa = 3.2 QVRR25 pKa = 11.84 DD26 pKa = 3.5 YY27 pKa = 11.45 RR28 pKa = 11.84 RR29 pKa = 11.84 GQRR32 pKa = 11.84 RR33 pKa = 11.84 RR34 pKa = 11.84 YY35 pKa = 7.64 EE36 pKa = 3.98 AQRR39 pKa = 11.84 VARR42 pKa = 11.84 NLQNIGRR49 pKa = 11.84 TIVGARR55 pKa = 11.84 PRR57 pKa = 11.84 EE58 pKa = 4.07 HH59 pKa = 6.45 TLALLMDD66 pKa = 4.9 PEE68 pKa = 6.43 AEE70 pKa = 4.43 LTRR73 pKa = 11.84 SMQEE77 pKa = 3.66 RR78 pKa = 11.84 ARR80 pKa = 11.84 TVPAEE85 pKa = 3.97 VLYY88 pKa = 7.38 MTRR91 pKa = 11.84 RR92 pKa = 11.84 DD93 pKa = 4.35 DD94 pKa = 3.08 IHH96 pKa = 7.71 HH97 pKa = 6.24 RR98 pKa = 11.84 VYY100 pKa = 10.74 YY101 pKa = 10.05 HH102 pKa = 7.03 RR103 pKa = 11.84 SEE105 pKa = 4.02 EE106 pKa = 3.86 RR107 pKa = 11.84 LLIIGNTQVDD117 pKa = 3.97 RR118 pKa = 11.84 TFIPQQSYY126 pKa = 8.87 EE127 pKa = 4.2 ALSKK131 pKa = 10.88 EE132 pKa = 3.81 HH133 pKa = 6.47 MEE135 pKa = 4.34 YY136 pKa = 10.06 IHH138 pKa = 7.07 LGVIQVRR145 pKa = 11.84 LQILHH150 pKa = 6.71 RR151 pKa = 11.84 KK152 pKa = 8.14 FAGTLALISFRR163 pKa = 11.84 DD164 pKa = 3.91 TRR166 pKa = 11.84 WAGDD170 pKa = 3.95 DD171 pKa = 3.59 DD172 pKa = 4.19 RR173 pKa = 11.84 QLISVMEE180 pKa = 3.96 VDD182 pKa = 5.22 LSEE185 pKa = 4.49 GCQLIYY191 pKa = 10.38 VIPDD195 pKa = 3.07 MMLTLKK201 pKa = 10.69 DD202 pKa = 4.52 FYY204 pKa = 11.5 RR205 pKa = 11.84 HH206 pKa = 5.38 IQVSIQTKK214 pKa = 10.59 GYY216 pKa = 7.55 DD217 pKa = 2.65 TWTNGEE223 pKa = 4.07 ANLLVTRR230 pKa = 11.84 SCTARR235 pKa = 11.84 LSNTPNVGFNYY246 pKa = 8.54 KK247 pKa = 7.44 TEE249 pKa = 3.93 RR250 pKa = 11.84 VAEE253 pKa = 4.07 YY254 pKa = 9.59 LHH256 pKa = 6.37 SRR258 pKa = 11.84 GVQAINATQHH268 pKa = 5.91 NALKK272 pKa = 10.57 LRR274 pKa = 11.84 NTEE277 pKa = 3.29 WHH279 pKa = 6.28 LQPSQATAPMQPQTVQTVGRR299 pKa = 11.84 YY300 pKa = 9.32 DD301 pKa = 3.41 GSLSLQFGNYY311 pKa = 6.64 THH313 pKa = 7.34 AEE315 pKa = 3.98 SSRR318 pKa = 11.84 PPVYY322 pKa = 9.29 TAHH325 pKa = 7.48 DD326 pKa = 3.91 EE327 pKa = 4.06 EE328 pKa = 5.82 RR329 pKa = 11.84 DD330 pKa = 3.29 IDD332 pKa = 4.07 EE333 pKa = 4.33 EE334 pKa = 4.63 SIAYY338 pKa = 9.79 LYY340 pKa = 11.19 SSDD343 pKa = 5.03 GEE345 pKa = 4.56 ADD347 pKa = 3.66 DD348 pKa = 4.58 TDD350 pKa = 5.65 LEE352 pKa = 4.52 FLTQLDD358 pKa = 3.75 QVIPPVEE365 pKa = 4.02 NVEE368 pKa = 4.14 GEE370 pKa = 4.37 EE371 pKa = 4.06 VSLFSLLDD379 pKa = 3.65 EE380 pKa = 5.36 LDD382 pKa = 4.11 AEE384 pKa = 4.47 AAAAAAAAAVTEE396 pKa = 4.62 EE397 pKa = 4.57 PAVADD402 pKa = 4.3 PIIEE406 pKa = 4.31 EE407 pKa = 4.1 FLQALDD413 pKa = 3.59 SAEE416 pKa = 4.22 QEE418 pKa = 4.14 LQVLIEE424 pKa = 5.16 DD425 pKa = 3.96 DD426 pKa = 3.92 RR427 pKa = 11.84 QRR429 pKa = 11.84 QAPARR434 pKa = 11.84 RR435 pKa = 11.84 AAHH438 pKa = 5.52 AEE440 pKa = 3.34 KK441 pKa = 10.32 RR442 pKa = 11.84 RR443 pKa = 11.84 RR444 pKa = 11.84 VEE446 pKa = 3.33 AAEE449 pKa = 3.88 QNRR452 pKa = 11.84 QNIEE456 pKa = 4.05 DD457 pKa = 4.25 FPDD460 pKa = 3.57 EE461 pKa = 4.16 EE462 pKa = 5.2 ALMDD466 pKa = 5.63 LLRR469 pKa = 11.84 QPCTEE474 pKa = 4.06 TLEE477 pKa = 4.4 HH478 pKa = 6.61 PRR480 pKa = 11.84 EE481 pKa = 4.09 NDD483 pKa = 3.57 DD484 pKa = 3.37 VSLNLAVLEE493 pKa = 4.36 EE494 pKa = 4.48 DD495 pKa = 5.07 NKK497 pKa = 11.52 DD498 pKa = 3.5 EE499 pKa = 5.29 LYY501 pKa = 10.54 DD502 pKa = 3.67 YY503 pKa = 7.63 PTAIRR508 pKa = 11.84 NLEE511 pKa = 3.96 NLFSSEE517 pKa = 4.04 VTGSYY522 pKa = 10.43 SPPDD526 pKa = 3.44 TDD528 pKa = 3.65 MVGQTGYY535 pKa = 11.43 APATSTQGWVGSHH548 pKa = 5.85 KK549 pKa = 10.94 FEE551 pKa = 4.95 GSTSKK556 pKa = 10.9 ARR558 pKa = 11.84 FKK560 pKa = 10.66 WKK562 pKa = 10.32 DD563 pKa = 3.23 PSEE566 pKa = 4.19 MFTLPSAYY574 pKa = 9.42 QVEE577 pKa = 4.55 GAIFVMPPDD586 pKa = 3.92 YY587 pKa = 10.68 DD588 pKa = 3.49 PKK590 pKa = 11.14 VFSRR594 pKa = 11.84 WEE596 pKa = 4.39 SITLNHH602 pKa = 6.33 MAPKK606 pKa = 10.44 AFANATDD613 pKa = 4.25 KK614 pKa = 10.22 ITYY617 pKa = 9.58 IEE619 pKa = 4.14 NLLGEE624 pKa = 4.28 NEE626 pKa = 4.72 KK627 pKa = 9.03 ITFQTWRR634 pKa = 11.84 MSYY637 pKa = 7.57 EE638 pKa = 3.86 QEE640 pKa = 3.99 YY641 pKa = 10.32 EE642 pKa = 3.99 ALKK645 pKa = 8.47 TQAVGEE651 pKa = 4.28 NGTQNVLSHH660 pKa = 5.65 IRR662 pKa = 11.84 KK663 pKa = 9.07 IFFLEE668 pKa = 4.36 DD669 pKa = 3.53 PKK671 pKa = 11.22 QGTTSSQDD679 pKa = 2.78 AAYY682 pKa = 10.35 RR683 pKa = 11.84 SLKK686 pKa = 10.71 SLTCMEE692 pKa = 4.24 MTGTAIRR699 pKa = 11.84 RR700 pKa = 11.84 YY701 pKa = 6.83 MASYY705 pKa = 10.57 FDD707 pKa = 4.61 LAAKK711 pKa = 9.42 SGRR714 pKa = 11.84 MWSSEE719 pKa = 3.93 EE720 pKa = 3.63 LSKK723 pKa = 11.3 EE724 pKa = 4.1 FFQKK728 pKa = 10.8 LPGRR732 pKa = 11.84 LGEE735 pKa = 4.18 RR736 pKa = 11.84 VEE738 pKa = 4.04 QAFNAKK744 pKa = 9.67 FQGNTIGVVPRR755 pKa = 11.84 ITFTQRR761 pKa = 11.84 YY762 pKa = 5.5 LTEE765 pKa = 3.9 ICEE768 pKa = 4.03 EE769 pKa = 3.82 ASYY772 pKa = 10.89 QRR774 pKa = 11.84 SLKK777 pKa = 10.3 NLNFCSSFPIPNYY790 pKa = 10.08 QKK792 pKa = 10.33 GAGRR796 pKa = 11.84 KK797 pKa = 8.72 FGLRR801 pKa = 11.84 KK802 pKa = 9.66 SKK804 pKa = 10.31 SYY806 pKa = 10.26 KK807 pKa = 9.88 GKK809 pKa = 8.17 PHH811 pKa = 6.09 KK812 pKa = 9.3 THH814 pKa = 6.08 VRR816 pKa = 11.84 IEE818 pKa = 3.77 KK819 pKa = 10.27 SKK821 pKa = 9.53 YY822 pKa = 9.84 LRR824 pKa = 11.84 SKK826 pKa = 9.99 KK827 pKa = 9.88 CKK829 pKa = 10.03 CYY831 pKa = 9.57 ACGEE835 pKa = 4.26 EE836 pKa = 4.15 GHH838 pKa = 6.38 FAKK841 pKa = 10.47 DD842 pKa = 3.41 CKK844 pKa = 10.75 NPRR847 pKa = 11.84 KK848 pKa = 8.7 LTEE851 pKa = 3.77 RR852 pKa = 11.84 VAILEE857 pKa = 4.37 DD858 pKa = 4.09 LDD860 pKa = 5.87 LGDD863 pKa = 5.3 DD864 pKa = 3.94 YY865 pKa = 12.07 DD866 pKa = 4.21 VVSVGLDD873 pKa = 2.98 EE874 pKa = 6.1 GDD876 pKa = 3.34 QSDD879 pKa = 4.14 IYY881 pKa = 10.96 SVSEE885 pKa = 4.07 GEE887 pKa = 4.36 EE888 pKa = 4.24 GHH890 pKa = 6.6 SDD892 pKa = 3.33 LHH894 pKa = 7.96 DD895 pKa = 3.37 EE896 pKa = 4.89 TIFSLTEE903 pKa = 3.88 EE904 pKa = 4.57 DD905 pKa = 5.42 DD906 pKa = 3.77 EE907 pKa = 5.38 AALLVGKK914 pKa = 10.37 AGTWRR919 pKa = 11.84 PQMKK923 pKa = 9.7 VSKK926 pKa = 10.76 KK927 pKa = 9.85 EE928 pKa = 3.96 FSCEE932 pKa = 4.04 HH933 pKa = 5.39 EE934 pKa = 3.53 WDD936 pKa = 4.01 YY937 pKa = 11.67 EE938 pKa = 4.25 VSGEE942 pKa = 4.35 LKK944 pKa = 10.48 CRR946 pKa = 11.84 CCFLPTRR953 pKa = 11.84 SKK955 pKa = 11.49 DD956 pKa = 3.43 RR957 pKa = 11.84 IHH959 pKa = 7.05 CKK961 pKa = 9.19 KK962 pKa = 10.79 CKK964 pKa = 9.02 ITVCNMCSEE973 pKa = 4.68 FCYY976 pKa = 10.29 NIKK979 pKa = 9.9 IVRR982 pKa = 11.84 EE983 pKa = 4.17 LPSSSLLKK991 pKa = 10.37 DD992 pKa = 3.51 RR993 pKa = 11.84 KK994 pKa = 9.66 KK995 pKa = 10.21 VDD997 pKa = 3.7 YY998 pKa = 10.56 IGVCIEE1004 pKa = 3.86 VLEE1007 pKa = 4.35 EE1008 pKa = 3.94 NKK1010 pKa = 10.35 KK1011 pKa = 10.5 LRR1013 pKa = 11.84 TEE1015 pKa = 4.08 KK1016 pKa = 10.64 EE1017 pKa = 3.99 VLIQDD1022 pKa = 4.29 LNSALEE1028 pKa = 3.88 QLKK1031 pKa = 8.49 NTKK1034 pKa = 9.65 GKK1036 pKa = 10.2 EE1037 pKa = 3.87 IIVEE1041 pKa = 4.19 EE1042 pKa = 4.28 EE1043 pKa = 4.17 SPEE1046 pKa = 3.82 LLARR1050 pKa = 11.84 ISYY1053 pKa = 10.29 LEE1055 pKa = 3.7 QRR1057 pKa = 11.84 EE1058 pKa = 4.35 LFMQEE1063 pKa = 4.3 LYY1065 pKa = 10.78 EE1066 pKa = 4.13 KK1067 pKa = 10.81 EE1068 pKa = 4.36 KK1069 pKa = 11.07 FEE1071 pKa = 5.45 KK1072 pKa = 10.62 DD1073 pKa = 2.93 LLQAQMRR1080 pKa = 11.84 SMAAEE1085 pKa = 4.16 MEE1087 pKa = 4.18 RR1088 pKa = 11.84 LQQQVSQLEE1097 pKa = 3.98 EE1098 pKa = 3.88 QIAQKK1103 pKa = 10.83 AEE1105 pKa = 4.21 SVGMLMEE1112 pKa = 4.65 EE1113 pKa = 4.12 NEE1115 pKa = 4.5 QVFSASQALQPKK1127 pKa = 8.34 GQYY1130 pKa = 9.74 NGLYY1134 pKa = 9.42 NLQIEE1139 pKa = 4.71 ICCDD1143 pKa = 2.46 SWTAFLVNAILDD1155 pKa = 3.88 TGATTSCIRR1164 pKa = 11.84 TGKK1167 pKa = 10.34 APRR1170 pKa = 11.84 EE1171 pKa = 3.99 TVEE1174 pKa = 4.26 DD1175 pKa = 3.89 SKK1177 pKa = 10.16 TQAVLKK1183 pKa = 10.03 GVNSVSIGTKK1193 pKa = 7.33 SLRR1196 pKa = 11.84 PGLMKK1201 pKa = 10.35 IQGGTYY1207 pKa = 9.81 RR1208 pKa = 11.84 IPKK1211 pKa = 8.87 TYY1213 pKa = 10.68 VIDD1216 pKa = 3.61 IQLSEE1221 pKa = 5.04 GIDD1224 pKa = 3.56 MILGCNFIRR1233 pKa = 11.84 AMEE1236 pKa = 4.59 GGLRR1240 pKa = 11.84 IEE1242 pKa = 4.88 GDD1244 pKa = 3.36 TLSFYY1249 pKa = 11.49 KK1250 pKa = 10.87 LLTTVQTSRR1259 pKa = 11.84 HH1260 pKa = 4.94 AQQIAAIQEE1269 pKa = 4.16 LEE1271 pKa = 4.03 LDD1273 pKa = 3.93 EE1274 pKa = 6.6 IEE1276 pKa = 4.31 YY1277 pKa = 11.0 QNLGALDD1284 pKa = 3.94 DD1285 pKa = 3.65 QAFFNKK1291 pKa = 9.71 KK1292 pKa = 9.61 FMEE1295 pKa = 4.1 QNRR1298 pKa = 11.84 ALMEE1302 pKa = 4.13 RR1303 pKa = 11.84 LKK1305 pKa = 10.88 KK1306 pKa = 10.3 IGIIGEE1312 pKa = 4.41 DD1313 pKa = 3.44 PLKK1316 pKa = 10.01 FWEE1319 pKa = 4.22 RR1320 pKa = 11.84 NKK1322 pKa = 10.17 VKK1324 pKa = 10.67 CKK1326 pKa = 10.55 LDD1328 pKa = 3.79 IINPNLTIEE1337 pKa = 4.64 DD1338 pKa = 4.25 KK1339 pKa = 10.39 PLKK1342 pKa = 10.38 HH1343 pKa = 5.57 VTPAMKK1349 pKa = 10.05 EE1350 pKa = 3.86 QMRR1353 pKa = 11.84 KK1354 pKa = 9.96 HH1355 pKa = 5.89 IDD1357 pKa = 2.99 KK1358 pKa = 10.85 LLEE1361 pKa = 4.18 LKK1363 pKa = 10.48 VIRR1366 pKa = 11.84 PSKK1369 pKa = 9.61 SRR1371 pKa = 11.84 HH1372 pKa = 4.63 RR1373 pKa = 11.84 TTAMIVQSGTEE1384 pKa = 3.84 MVLQKK1389 pKa = 10.97 DD1390 pKa = 3.77 KK1391 pKa = 11.44 NGKK1394 pKa = 8.89 EE1395 pKa = 3.75 KK1396 pKa = 10.26 MVEE1399 pKa = 3.76 KK1400 pKa = 10.29 RR1401 pKa = 11.84 GKK1403 pKa = 9.32 EE1404 pKa = 3.57 RR1405 pKa = 11.84 LVFNYY1410 pKa = 9.57 KK1411 pKa = 10.11 RR1412 pKa = 11.84 LNDD1415 pKa = 3.67 NTEE1418 pKa = 3.67 KK1419 pKa = 10.83 DD1420 pKa = 3.75 QYY1422 pKa = 10.96 SLPGINTIIQRR1433 pKa = 11.84 IGRR1436 pKa = 11.84 SKK1438 pKa = 10.3 IYY1440 pKa = 10.79 SKK1442 pKa = 11.19 FDD1444 pKa = 3.64 LKK1446 pKa = 11.29 SGFHH1450 pKa = 5.22 QVAMDD1455 pKa = 4.07 PASIEE1460 pKa = 3.88 WTAFWAIDD1468 pKa = 3.73 GLYY1471 pKa = 9.3 EE1472 pKa = 4.03 WLVMPFGLKK1481 pKa = 9.53 NAPATFQRR1489 pKa = 11.84 KK1490 pKa = 7.46 MDD1492 pKa = 3.44 MCFAGTEE1499 pKa = 4.1 HH1500 pKa = 7.13 FIAVYY1505 pKa = 10.14 IDD1507 pKa = 4.97 DD1508 pKa = 3.91 ILVFSEE1514 pKa = 4.26 TEE1516 pKa = 3.77 EE1517 pKa = 4.11 DD1518 pKa = 3.85 HH1519 pKa = 7.43 VKK1521 pKa = 10.38 HH1522 pKa = 5.87 LHH1524 pKa = 5.75 QMLHH1528 pKa = 5.79 ICEE1531 pKa = 4.31 KK1532 pKa = 9.99 EE1533 pKa = 4.03 GLVLSPTKK1541 pKa = 10.13 MKK1543 pKa = 10.43 IGATSIDD1550 pKa = 3.79 FLGATIGRR1558 pKa = 11.84 SKK1560 pKa = 10.5 IRR1562 pKa = 11.84 LQPHH1566 pKa = 6.81 IIKK1569 pKa = 10.5 KK1570 pKa = 7.61 ITEE1573 pKa = 4.07 AKK1575 pKa = 10.31 EE1576 pKa = 3.99 EE1577 pKa = 4.01 EE1578 pKa = 4.33 LQTTKK1583 pKa = 10.99 GLRR1586 pKa = 11.84 AWLGILNYY1594 pKa = 9.98 ARR1596 pKa = 11.84 SYY1598 pKa = 10.68 IPNLGKK1604 pKa = 8.47 TLGPLYY1610 pKa = 10.78 SKK1612 pKa = 10.79 VSPTGEE1618 pKa = 3.41 KK1619 pKa = 10.48 RR1620 pKa = 11.84 MNHH1623 pKa = 5.53 QDD1625 pKa = 2.67 WALVKK1630 pKa = 10.14 KK1631 pKa = 11.02 VKK1633 pKa = 10.66 DD1634 pKa = 3.74 SVQNLPDD1641 pKa = 3.42 MEE1643 pKa = 5.24 LPPKK1647 pKa = 9.57 QCCIVIEE1654 pKa = 4.47 TDD1656 pKa = 2.79 GCMDD1660 pKa = 3.39 GWGGVCKK1667 pKa = 10.19 WKK1669 pKa = 9.23 LTRR1672 pKa = 11.84 HH1673 pKa = 6.04 DD1674 pKa = 4.06 SKK1676 pKa = 8.97 TTEE1679 pKa = 4.02 KK1680 pKa = 9.35 TCAYY1684 pKa = 10.07 ASGKK1688 pKa = 9.75 FSPVKK1693 pKa = 9.83 STIDD1697 pKa = 3.42 AEE1699 pKa = 4.22 IQAVICSLDD1708 pKa = 3.27 KK1709 pKa = 11.18 FKK1711 pKa = 10.88 IFYY1714 pKa = 10.16 LDD1716 pKa = 3.22 KK1717 pKa = 10.56 QEE1719 pKa = 4.05 VVIRR1723 pKa = 11.84 TDD1725 pKa = 3.3 CQAIISFFDD1734 pKa = 3.27 KK1735 pKa = 10.65 TSQNKK1740 pKa = 8.53 PSRR1743 pKa = 11.84 VRR1745 pKa = 11.84 WLTFTDD1751 pKa = 5.5 FITGIGIPVRR1761 pKa = 11.84 FEE1763 pKa = 4.67 HH1764 pKa = 7.54 ISGKK1768 pKa = 10.52 DD1769 pKa = 3.21 NLLADD1774 pKa = 3.84 TLSRR1778 pKa = 11.84 LVLCMVQGWTHH1789 pKa = 6.91 DD1790 pKa = 4.19 GIKK1793 pKa = 10.42 AITPAITAIKK1803 pKa = 9.92 DD1804 pKa = 3.54 DD1805 pKa = 3.92 SDD1807 pKa = 3.93 SARR1810 pKa = 11.84 VAAIIMKK1817 pKa = 8.82 VLPQEE1822 pKa = 4.86 RR1823 pKa = 11.84 IFHH1826 pKa = 5.33 LTEE1829 pKa = 3.86 VEE1831 pKa = 5.06 GPALKK1836 pKa = 10.28 CACNKK1841 pKa = 9.72 EE1842 pKa = 4.13 VLIKK1846 pKa = 9.92 TSHH1849 pKa = 4.97 TWRR1852 pKa = 11.84 NPDD1855 pKa = 3.8 RR1856 pKa = 11.84 KK1857 pKa = 10.28 FCVCPDD1863 pKa = 3.62 GRR1865 pKa = 11.84 CHH1867 pKa = 6.52 IWYY1870 pKa = 8.57 WWDD1873 pKa = 3.36 LLEE1876 pKa = 6.67 DD1877 pKa = 3.9 YY1878 pKa = 10.55 VQQRR1882 pKa = 11.84 VTAAQLAEE1890 pKa = 4.27 CKK1892 pKa = 10.27 NFRR1895 pKa = 11.84 QQLDD1899 pKa = 3.74 NIKK1902 pKa = 10.43 RR1903 pKa = 11.84 QLDD1906 pKa = 3.29 SDD1908 pKa = 3.65 KK1909 pKa = 11.02 RR1910 pKa = 11.84 NRR1912 pKa = 11.84 AHH1914 pKa = 7.5 SII1916 pKa = 3.28
Molecular weight: 218.6 kDa
Isoelectric point according different methods:
IPC2.protein.svr19 5.74
IPC2_protein 5.741
IPC_protein 5.779
Toseland 6.071
ProMoST 6.097
Dawson 5.995
Bjellqvist 6.033
Wikipedia 5.982
Rodwell 5.982
Grimsley 6.173
Solomon 5.995
Lehninger 5.982
Nozaki 6.249
DTASelect 6.427
Thurlkill 6.415
EMBOSS 6.376
Sillero 6.351
Patrickios 4.279
IPC_peptide 6.008
IPC2_peptide 6.313
IPC2.peptide.svr19 6.352
Protein with the highest isoelectric point:
>tr|B5AK50|B5AK50_9VIRU Reverse transcriptase OS=Cycad leaf necrosis virus OX=549205 PE=4 SV=1
MM1 pKa = 7.43 SLANSKK7 pKa = 10.4 SSQAYY12 pKa = 9.21 QDD14 pKa = 3.95 ALAATATAWEE24 pKa = 4.84 GTSSGFSDD32 pKa = 3.66 KK33 pKa = 11.63 AEE35 pKa = 4.23 TPSIASLSRR44 pKa = 11.84 QLNTILFLTLRR55 pKa = 11.84 IDD57 pKa = 3.89 SNLSDD62 pKa = 3.64 LQNRR66 pKa = 11.84 VQVLDD71 pKa = 3.55 DD72 pKa = 3.73 RR73 pKa = 11.84 VRR75 pKa = 11.84 LVQNARR81 pKa = 11.84 EE82 pKa = 4.3 VYY84 pKa = 8.54 GTRR87 pKa = 11.84 AQIDD91 pKa = 3.79 SLAEE95 pKa = 3.78 QLAGLQINPTTVIKK109 pKa = 8.44 TTGTLKK115 pKa = 9.41 VHH117 pKa = 6.92 RR118 pKa = 11.84 NPFEE122 pKa = 3.67 LLRR125 pKa = 11.84 RR126 pKa = 11.84 IRR128 pKa = 3.84
Molecular weight: 14.13 kDa
Isoelectric point according different methods:
IPC2.protein.svr19 9.034
IPC2_protein 8.975
IPC_protein 9.209
Toseland 9.823
ProMoST 9.794
Dawson 10.014
Bjellqvist 9.677
Wikipedia 10.189
Rodwell 10.248
Grimsley 10.087
Solomon 10.116
Lehninger 10.087
Nozaki 9.765
DTASelect 9.692
Thurlkill 9.867
EMBOSS 10.218
Sillero 9.926
Patrickios 10.028
IPC_peptide 10.116
IPC2_peptide 8.229
IPC2.peptide.svr19 7.998
Peptides (in silico digests for buttom-up proteomics)
Below you can find
in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.
Try ESI
ChTry ESI
ArgC ESI
LysN ESI
TryLysC ESI
Try MALDI
ChTry MALDI
ArgC MALDI
LysN MALDI
TryLysC MALDI
Try LTQ
ChTry LTQ
ArgC LTQ
LysN LTQ
TryLysC LTQ
Try MSlow
ChTry MSlow
ArgC MSlow
LysN MSlow
TryLysC MSlow
Try MShigh
ChTry MShigh
ArgC MShigh
LysN MShigh
TryLysC MShigh
General Statistics
Number of major isoforms
Number of additional isoforms
Number of all proteins
Number of amino acids
Min. Seq. Length
Max. Seq. Length
Avg. Seq. Length
Avg. Mol. Weight
3
0
3
2219
128
1916
739.7
84.19
Amino acid frequency
Ala
Cys
Asp
Glu
Phe
Gly
His
Ile
Lys
Leu
6.805 ± 1.155
1.983 ± 0.642
5.813 ± 0.413
8.337 ± 1.402
3.155 ± 0.715
5.047 ± 0.681
2.343 ± 0.552
6.129 ± 0.407
7.03 ± 1.129
9.644 ± 2.483
Met
Asn
Gln
Pro
Arg
Ser
Thr
Val
Trp
Tyr
2.253 ± 0.776
3.605 ± 0.624
3.38 ± 0.822
5.723 ± 1.202
6.084 ± 0.802
6.85 ± 1.661
6.084 ± 0.955
5.633 ± 0.844
1.217 ± 0.267
2.884 ± 0.755
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level
Most of the basic statistics you can see at this page can be downloaded from this CSV file
For dipeptide frequency statistics click here