Phytophthora infestans RNA virus 3
Average proteome isoelectric point is 7.46
Get precalculated fractions of proteins
Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
All
Note: above files contain also dissociation constants (pKa)
Virtual 2D-PAGE plot for 2 proteins (isoelectric point calculated using IPC2_protein)
Get csv file with sequences according to given criteria:
* You can choose from 21 different methods for calculating isoelectric point
Summary statistics related to proteome-wise predictions
Protein with the lowest isoelectric point:
>tr|H2DG68|H2DG68_9VIRU RNA-directed RNA polymerase OS=Phytophthora infestans RNA virus 3 OX=1133557 PE=4 SV=1
MM1 pKa = 7.16 QSIGSAFDD9 pKa = 3.19 QAEE12 pKa = 3.95 RR13 pKa = 11.84 GAGFDD18 pKa = 3.45 RR19 pKa = 11.84 SRR21 pKa = 11.84 DD22 pKa = 3.57 MGSRR26 pKa = 11.84 PSDD29 pKa = 3.56 VLHH32 pKa = 6.03 STSGHH37 pKa = 5.01 VGRR40 pKa = 11.84 TGPDD44 pKa = 3.12 GSNGRR49 pKa = 11.84 VVDD52 pKa = 5.45 AISTPVLPACNNAQMVPTQLGAYY75 pKa = 8.34 TVDD78 pKa = 2.95 QYY80 pKa = 11.3 FGKK83 pKa = 10.41 RR84 pKa = 11.84 ISWDD88 pKa = 3.44 SYY90 pKa = 10.93 SFEE93 pKa = 4.21 ALDD96 pKa = 3.54 RR97 pKa = 11.84 RR98 pKa = 11.84 AEE100 pKa = 3.9 ITASGRR106 pKa = 11.84 YY107 pKa = 9.52 GYY109 pKa = 10.41 DD110 pKa = 2.57 SEE112 pKa = 4.62 YY113 pKa = 10.34 IRR115 pKa = 11.84 RR116 pKa = 11.84 VDD118 pKa = 3.12 MALPEE123 pKa = 4.26 RR124 pKa = 11.84 FNLPSRR130 pKa = 11.84 VILGGQLDD138 pKa = 4.11 AAAHH142 pKa = 4.62 TVVRR146 pKa = 11.84 NSPTLPLLRR155 pKa = 11.84 LTTRR159 pKa = 11.84 PEE161 pKa = 3.68 PPRR164 pKa = 11.84 RR165 pKa = 11.84 DD166 pKa = 3.21 TRR168 pKa = 11.84 PFYY171 pKa = 11.32 AEE173 pKa = 4.41 AEE175 pKa = 4.33 VLQEE179 pKa = 4.11 VEE181 pKa = 4.5 DD182 pKa = 4.24 GGIVAQATLKK192 pKa = 9.8 TFNHH196 pKa = 5.89 VLSSHH201 pKa = 7.05 RR202 pKa = 11.84 YY203 pKa = 7.99 FGLQGSVFKK212 pKa = 10.93 EE213 pKa = 3.8 EE214 pKa = 4.11 WKK216 pKa = 10.59 VAEE219 pKa = 4.15 ADD221 pKa = 4.12 RR222 pKa = 11.84 IRR224 pKa = 11.84 RR225 pKa = 11.84 MAQLTRR231 pKa = 11.84 LASHH235 pKa = 5.9 GHH237 pKa = 6.31 LYY239 pKa = 10.78 VRR241 pKa = 11.84 MFSKK245 pKa = 10.43 LLCMFNSALVRR256 pKa = 11.84 EE257 pKa = 4.61 QYY259 pKa = 10.56 TPVGVGAHH267 pKa = 5.83 TSFEE271 pKa = 4.52 GPQHH275 pKa = 6.19 AAAARR280 pKa = 11.84 PAVYY284 pKa = 9.04 WADD287 pKa = 3.31 AFPPRR292 pKa = 11.84 LSAEE296 pKa = 4.15 VEE298 pKa = 4.68 VYY300 pKa = 9.44 TVAADD305 pKa = 4.17 LAAVANQVAVALTRR319 pKa = 11.84 GFHH322 pKa = 6.38 VYY324 pKa = 10.6 NIAAGTLVRR333 pKa = 11.84 YY334 pKa = 9.18 ARR336 pKa = 11.84 RR337 pKa = 11.84 IDD339 pKa = 3.57 MLNDD343 pKa = 2.96 WGVWRR348 pKa = 11.84 AAADD352 pKa = 3.48 QIAAANVQAALSDD365 pKa = 3.3 LRR367 pKa = 11.84 RR368 pKa = 11.84 YY369 pKa = 9.06 GKK371 pKa = 9.91 NAARR375 pKa = 11.84 GIAKK379 pKa = 10.15 LEE381 pKa = 4.14 PKK383 pKa = 9.66 EE384 pKa = 3.99 LPEE387 pKa = 4.01 VTVGGEE393 pKa = 3.87 DD394 pKa = 3.62 QLWEE398 pKa = 4.33 EE399 pKa = 4.8 FLLIHH404 pKa = 6.87 DD405 pKa = 4.16 RR406 pKa = 11.84 RR407 pKa = 11.84 RR408 pKa = 11.84 YY409 pKa = 10.35 LIDD412 pKa = 3.89 AEE414 pKa = 4.45 GVPAEE419 pKa = 4.62 ALHH422 pKa = 6.59 IWMVALAARR431 pKa = 11.84 HH432 pKa = 6.06 RR433 pKa = 11.84 INCRR437 pKa = 11.84 EE438 pKa = 3.99 VQVGGVARR446 pKa = 11.84 VFVPASEE453 pKa = 4.37 SVTWEE458 pKa = 3.55 CDD460 pKa = 3.3 YY461 pKa = 11.64 AGVYY465 pKa = 9.33 IHH467 pKa = 6.86 TGCQHH472 pKa = 5.67 VEE474 pKa = 3.79 EE475 pKa = 4.79 KK476 pKa = 10.66 KK477 pKa = 10.72 RR478 pKa = 11.84 LFDD481 pKa = 3.64 AMAYY485 pKa = 9.76 SDD487 pKa = 5.13 RR488 pKa = 11.84 VDD490 pKa = 4.21 DD491 pKa = 3.9 SHH493 pKa = 7.7 NLSAHH498 pKa = 7.14 AILDD502 pKa = 3.98 SIRR505 pKa = 11.84 WLVLKK510 pKa = 9.88 TGAEE514 pKa = 3.96 ADD516 pKa = 3.62 LVQAVEE522 pKa = 4.57 LVDD525 pKa = 4.03 SLSAGYY531 pKa = 8.91 TSMEE535 pKa = 4.0 LRR537 pKa = 11.84 GVATGVSTAFTGLMLSHH554 pKa = 6.98 SLRR557 pKa = 11.84 VPFDD561 pKa = 3.36 ATLPAYY567 pKa = 10.07 LYY569 pKa = 8.97 PFRR572 pKa = 11.84 VNAQLLSEE580 pKa = 4.23 TEE582 pKa = 3.67 EE583 pKa = 4.29 WLGLRR588 pKa = 11.84 PNMRR592 pKa = 11.84 LNMMYY597 pKa = 9.65 YY598 pKa = 9.94 NCIMQSNAFGWASFASSAEE617 pKa = 4.01 GGCFNLAAAGLTGSAAAQQRR637 pKa = 11.84 HH638 pKa = 4.58 GRR640 pKa = 11.84 EE641 pKa = 3.6 LTTRR645 pKa = 11.84 RR646 pKa = 11.84 GEE648 pKa = 4.11 YY649 pKa = 10.53 SLALHH654 pKa = 6.82 DD655 pKa = 5.58 RR656 pKa = 11.84 MVLSCCAHH664 pKa = 6.62 AYY666 pKa = 9.34 GWSPSKK672 pKa = 11.02 ALLLSIQPEE681 pKa = 4.06 RR682 pKa = 11.84 VVRR685 pKa = 11.84 LSIVDD690 pKa = 3.42 GTDD693 pKa = 2.99 RR694 pKa = 11.84 SFHH697 pKa = 6.23 SLWQVHH703 pKa = 5.37 TVPHH707 pKa = 6.36 AALFYY712 pKa = 10.14 EE713 pKa = 4.53 EE714 pKa = 3.69 QWLVKK719 pKa = 10.17 KK720 pKa = 10.75 IPDD723 pKa = 3.73 YY724 pKa = 11.32 AVLPMPRR731 pKa = 11.84 GTVKK735 pKa = 10.18 WPEE738 pKa = 3.89 DD739 pKa = 3.23 KK740 pKa = 10.88 ARR742 pKa = 11.84 PVVDD746 pKa = 3.87 SAADD750 pKa = 3.41 ASEE753 pKa = 4.13 VRR755 pKa = 11.84 VGATMSPFDD764 pKa = 3.96 YY765 pKa = 10.42 KK766 pKa = 11.2 YY767 pKa = 9.27 WLADD771 pKa = 3.18 GGQAYY776 pKa = 10.47 SLQYY780 pKa = 10.5 YY781 pKa = 8.5 VAANAATGTVGNAARR796 pKa = 11.84 YY797 pKa = 8.41 SAAGEE802 pKa = 4.0 YY803 pKa = 9.2 TRR805 pKa = 11.84 LGVWRR810 pKa = 11.84 KK811 pKa = 8.44 PVQARR816 pKa = 11.84 WPAAPATLDD825 pKa = 3.51 LAGRR829 pKa = 11.84 GGMRR833 pKa = 11.84 MAGEE837 pKa = 4.22 LSDD840 pKa = 5.42 YY841 pKa = 10.36 IDD843 pKa = 4.72 PYY845 pKa = 9.4 MLSMYY850 pKa = 10.07 NHH852 pKa = 5.72 EE853 pKa = 4.86 HH854 pKa = 6.87 KK855 pKa = 10.77 LPNAFGVQRR864 pKa = 11.84 YY865 pKa = 9.09 HH866 pKa = 6.65 NGAVTVGARR875 pKa = 11.84 RR876 pKa = 11.84 SWFQLSQGAADD887 pKa = 3.65 IAPTISYY894 pKa = 7.64 EE895 pKa = 4.06 APSWAVRR902 pKa = 11.84 EE903 pKa = 4.11 VEE905 pKa = 4.8 PIADD909 pKa = 3.86 YY910 pKa = 11.36 YY911 pKa = 11.18 LAALVDD917 pKa = 3.94 PLEE920 pKa = 4.46 GKK922 pKa = 8.45 FTGFHH927 pKa = 5.79 WASLAGLKK935 pKa = 10.4 PGVGQGRR942 pKa = 11.84 DD943 pKa = 3.32 VASASLAPFGLNPIRR958 pKa = 11.84 SSSALANDD966 pKa = 4.07 NDD968 pKa = 3.7 PHH970 pKa = 6.62 QPRR973 pKa = 11.84 GRR975 pKa = 11.84 PVKK978 pKa = 9.33 RR979 pKa = 11.84 TAAGRR984 pKa = 11.84 RR985 pKa = 11.84 VGQAIDD991 pKa = 3.21 AARR994 pKa = 11.84 ARR996 pKa = 11.84 TRR998 pKa = 11.84 ARR1000 pKa = 11.84 SEE1002 pKa = 4.2 TPPPPLLDD1010 pKa = 3.96 DD1011 pKa = 5.31 CEE1013 pKa = 6.0 GEE1015 pKa = 4.19 DD1016 pKa = 4.39 AGVNSTATLSMDD1028 pKa = 3.46 QGDD1031 pKa = 4.05 VTPTLITPNAGGDD1044 pKa = 3.74 YY1045 pKa = 9.2 VTADD1049 pKa = 3.38 GKK1051 pKa = 9.51 VVKK1054 pKa = 9.31 QVRR1057 pKa = 11.84 ILQSGGNATRR1067 pKa = 11.84 LRR1069 pKa = 11.84 DD1070 pKa = 3.56 VRR1072 pKa = 11.84 SRR1074 pKa = 11.84 PSRR1077 pKa = 11.84 TVRR1080 pKa = 11.84 GRR1082 pKa = 11.84 VVGGGGAATPARR1094 pKa = 11.84 ARR1096 pKa = 11.84 VEE1098 pKa = 4.17 TTSQQRR1104 pKa = 11.84 AEE1106 pKa = 4.97 GIASALASAVRR1117 pKa = 11.84 TPLATARR1124 pKa = 11.84 HH1125 pKa = 5.62 TGSALRR1131 pKa = 11.84 EE1132 pKa = 4.15 GLRR1135 pKa = 11.84 AAATKK1140 pKa = 10.59 GQDD1143 pKa = 2.99 AFLNTLRR1150 pKa = 11.84 SAEE1153 pKa = 4.05 RR1154 pKa = 11.84 PEE1156 pKa = 5.55 AGLTRR1161 pKa = 11.84 ANRR1164 pKa = 11.84 KK1165 pKa = 8.41 IAAGVISEE1173 pKa = 4.07 ALEE1176 pKa = 4.37 AGSLGYY1182 pKa = 10.29 DD1183 pKa = 3.15 QLAVVLQHH1191 pKa = 6.81 LPALRR1196 pKa = 11.84 KK1197 pKa = 9.24 QLPSGVTAHH1206 pKa = 6.92 LPLPAQEE1213 pKa = 4.01 EE1214 pKa = 4.86 HH1215 pKa = 5.87 EE1216 pKa = 4.44 TVEE1219 pKa = 4.8 VEE1221 pKa = 4.15 VLSPKK1226 pKa = 10.68 GVDD1229 pKa = 3.1 EE1230 pKa = 4.12 LAGRR1234 pKa = 11.84 EE1235 pKa = 4.09 VEE1237 pKa = 4.42 LTDD1240 pKa = 3.28 TAAYY1244 pKa = 7.63 EE1245 pKa = 4.22 AQSNLQQEE1253 pKa = 4.31 AAAWSRR1259 pKa = 11.84 PAITPGMGEE1268 pKa = 4.11 SAGEE1272 pKa = 3.86 ALRR1275 pKa = 11.84 EE1276 pKa = 3.99 EE1277 pKa = 4.76 GAPRR1281 pKa = 11.84 LPILDD1286 pKa = 3.94 DD1287 pKa = 4.0 TEE1289 pKa = 5.17 SDD1291 pKa = 3.82 SAPLNN1296 pKa = 3.79
Molecular weight: 140.76 kDa
Isoelectric point according different methods:
IPC2.protein.svr19 6.256
IPC2_protein 6.173
IPC_protein 6.275
Toseland 6.664
ProMoST 6.664
Dawson 6.59
Bjellqvist 6.576
Wikipedia 6.62
Rodwell 6.59
Grimsley 6.839
Solomon 6.59
Lehninger 6.59
Nozaki 6.868
DTASelect 7.059
Thurlkill 7.073
EMBOSS 7.044
Sillero 6.985
Patrickios 4.317
IPC_peptide 6.605
IPC2_peptide 6.898
IPC2.peptide.svr19 6.828
Protein with the highest isoelectric point:
>tr|H2DG68|H2DG68_9VIRU RNA-directed RNA polymerase OS=Phytophthora infestans RNA virus 3 OX=1133557 PE=4 SV=1
MM1 pKa = 7.29 NLAFQVAGVTPAYY14 pKa = 10.98 AMMAWLYY21 pKa = 7.18 LTPTPPSVYY30 pKa = 9.95 TILPVLGQLMTAVLHH45 pKa = 6.44 SDD47 pKa = 3.27 IARR50 pKa = 11.84 TRR52 pKa = 11.84 EE53 pKa = 3.86 PGVPCPIADD62 pKa = 3.39 VWDD65 pKa = 3.77 MRR67 pKa = 11.84 RR68 pKa = 11.84 NPATVRR74 pKa = 11.84 TKK76 pKa = 10.46 AKK78 pKa = 8.31 QWAVAFTGRR87 pKa = 11.84 TWDD90 pKa = 3.33 GSLWKK95 pKa = 10.24 DD96 pKa = 3.38 LPGYY100 pKa = 10.05 RR101 pKa = 11.84 AIQPSSCGCYY111 pKa = 9.74 ILSTSQLAPVTHH123 pKa = 6.74 FVAEE127 pKa = 4.18 QGEE130 pKa = 5.12 SVCEE134 pKa = 3.67 AHH136 pKa = 6.17 TRR138 pKa = 11.84 AHH140 pKa = 6.8 AKK142 pKa = 9.63 FLHH145 pKa = 6.78 PSTTLDD151 pKa = 3.59 TLPTEE156 pKa = 4.63 YY157 pKa = 10.92 LVGWNLIFPPEE168 pKa = 4.05 RR169 pKa = 11.84 SSADD173 pKa = 3.07 GKK175 pKa = 10.84 QLLDD179 pKa = 3.76 ANAVLSNCSEE189 pKa = 4.73 SIRR192 pKa = 11.84 KK193 pKa = 9.04 AFSDD197 pKa = 3.59 KK198 pKa = 10.26 IVRR201 pKa = 11.84 EE202 pKa = 4.36 GVPDD206 pKa = 3.23 WTNIMVGNVALCAEE220 pKa = 5.0 HH221 pKa = 7.49 DD222 pKa = 3.95 PAILDD227 pKa = 3.56 VMAMIPRR234 pKa = 11.84 GTSFLGHH241 pKa = 6.73 LKK243 pKa = 10.13 CLKK246 pKa = 10.14 KK247 pKa = 10.01 IHH249 pKa = 5.03 THH251 pKa = 4.41 VRR253 pKa = 11.84 VTGLSLTTGLSEE265 pKa = 3.96 DD266 pKa = 2.97 AAYY269 pKa = 10.4 RR270 pKa = 11.84 RR271 pKa = 11.84 RR272 pKa = 11.84 FYY274 pKa = 11.41 GLDD277 pKa = 3.27 YY278 pKa = 11.12 MMGRR282 pKa = 11.84 SDD284 pKa = 5.65 FYY286 pKa = 10.97 PLDD289 pKa = 3.96 FLDD292 pKa = 3.92 EE293 pKa = 4.38 MVSRR297 pKa = 11.84 MVPPSKK303 pKa = 10.32 HH304 pKa = 5.87 ALPRR308 pKa = 11.84 MNGKK312 pKa = 8.89 EE313 pKa = 3.74 LVFDD317 pKa = 3.61 KK318 pKa = 11.38 EE319 pKa = 4.43 EE320 pKa = 4.1 YY321 pKa = 10.36 NKK323 pKa = 10.57 LFAATVDD330 pKa = 3.23 KK331 pKa = 10.81 ALRR334 pKa = 11.84 EE335 pKa = 3.85 ILLPEE340 pKa = 3.75 THH342 pKa = 6.63 LLSFEE347 pKa = 4.07 EE348 pKa = 4.2 LMEE351 pKa = 4.86 RR352 pKa = 11.84 RR353 pKa = 11.84 LNWVSSGSAPGVKK366 pKa = 8.56 LTHH369 pKa = 5.97 TVGDD373 pKa = 3.83 TTEE376 pKa = 3.91 KK377 pKa = 10.66 GGVNKK382 pKa = 10.03 RR383 pKa = 11.84 VAFTHH388 pKa = 7.14 LDD390 pKa = 3.23 TAALRR395 pKa = 11.84 RR396 pKa = 11.84 EE397 pKa = 4.16 MHH399 pKa = 5.36 NHH401 pKa = 5.95 RR402 pKa = 11.84 EE403 pKa = 4.23 AVLHH407 pKa = 6.1 SRR409 pKa = 11.84 HH410 pKa = 5.17 ATKK413 pKa = 10.67 FEE415 pKa = 4.52 PGKK418 pKa = 10.66 KK419 pKa = 8.63 RR420 pKa = 11.84 ALWNTGLMHH429 pKa = 6.52 YY430 pKa = 10.17 SSSSVLLEE438 pKa = 3.45 QFANNEE444 pKa = 4.17 RR445 pKa = 11.84 KK446 pKa = 9.32 NVPWYY451 pKa = 9.58 MPSHH455 pKa = 6.35 TSAFSTAQDD464 pKa = 3.66 FVRR467 pKa = 11.84 VRR469 pKa = 11.84 TLRR472 pKa = 11.84 EE473 pKa = 3.91 RR474 pKa = 11.84 IGVMWDD480 pKa = 3.62 FSDD483 pKa = 5.13 FNINHH488 pKa = 6.98 LLEE491 pKa = 4.77 HH492 pKa = 6.14 MAYY495 pKa = 9.8 LYY497 pKa = 10.81 KK498 pKa = 10.44 RR499 pKa = 11.84 AGEE502 pKa = 3.91 ILVEE506 pKa = 4.34 RR507 pKa = 11.84 NVSGKK512 pKa = 10.64 GDD514 pKa = 3.9 SDD516 pKa = 3.73 VLAAAKK522 pKa = 8.88 WVAASTMEE530 pKa = 3.95 TWLEE534 pKa = 3.9 DD535 pKa = 3.57 AEE537 pKa = 4.69 SGVTAKK543 pKa = 10.37 VKK545 pKa = 10.11 RR546 pKa = 11.84 SLMTGVRR553 pKa = 11.84 GTSFVNTILNHH564 pKa = 6.25 VYY566 pKa = 10.05 TEE568 pKa = 4.01 MARR571 pKa = 11.84 EE572 pKa = 3.71 YY573 pKa = 10.71 ALRR576 pKa = 11.84 LGGVQLLNDD585 pKa = 3.56 PTYY588 pKa = 11.56 AFGDD592 pKa = 4.09 DD593 pKa = 3.78 VFSSADD599 pKa = 3.32 SHH601 pKa = 6.53 AKK603 pKa = 10.01 AVLFCHH609 pKa = 6.82 VMNTLGTAGTTYY621 pKa = 10.58 KK622 pKa = 10.49 INLEE626 pKa = 4.11 LGEE629 pKa = 4.59 LLRR632 pKa = 11.84 VSYY635 pKa = 11.13 DD636 pKa = 3.19 EE637 pKa = 4.93 TGFSGYY643 pKa = 8.58 PLRR646 pKa = 11.84 ALVGLVSGEE655 pKa = 4.1 YY656 pKa = 10.65 FEE658 pKa = 6.23 GNAINDD664 pKa = 3.19 IHH666 pKa = 6.89 QRR668 pKa = 11.84 AAAFHH673 pKa = 5.25 EE674 pKa = 4.32 QVRR677 pKa = 11.84 KK678 pKa = 9.82 CVARR682 pKa = 11.84 GANLDD687 pKa = 2.9 IDD689 pKa = 3.61 KK690 pKa = 10.07 WYY692 pKa = 10.17 KK693 pKa = 10.22 ILMNRR698 pKa = 11.84 HH699 pKa = 6.13 CSLKK703 pKa = 8.95 VTKK706 pKa = 10.7 ASGKK710 pKa = 9.72 RR711 pKa = 11.84 LNIEE715 pKa = 3.88 PNIQLIYY722 pKa = 9.44 TPAVFGGLGLIKK734 pKa = 10.39 SEE736 pKa = 4.11 MPKK739 pKa = 9.93 TMRR742 pKa = 11.84 LHH744 pKa = 6.5 EE745 pKa = 4.13 WTSTVRR751 pKa = 11.84 YY752 pKa = 8.89 PIFEE756 pKa = 4.25 FEE758 pKa = 4.27 RR759 pKa = 11.84 GFAQSIVGTGFRR771 pKa = 11.84 DD772 pKa = 3.18 RR773 pKa = 11.84 EE774 pKa = 4.32 LIVRR778 pKa = 11.84 LVPGEE783 pKa = 3.82 EE784 pKa = 3.72 RR785 pKa = 11.84 KK786 pKa = 10.19 RR787 pKa = 11.84 LIGVATNEE795 pKa = 4.03 VGQSIIGGKK804 pKa = 9.96 APPSQVKK811 pKa = 9.26 YY812 pKa = 10.97 AFRR815 pKa = 11.84 KK816 pKa = 9.17 YY817 pKa = 11.02 VDD819 pKa = 4.38 GFVAWRR825 pKa = 11.84 KK826 pKa = 10.15 GITKK830 pKa = 9.71 GLPIDD835 pKa = 4.04 LARR838 pKa = 11.84 DD839 pKa = 3.57 SEE841 pKa = 4.03 ISMDD845 pKa = 3.55 VGRR848 pKa = 11.84 AEE850 pKa = 4.54 ALWFAAMRR858 pKa = 11.84 GRR860 pKa = 11.84 DD861 pKa = 3.36 TSHH864 pKa = 7.49 VYY866 pKa = 10.52 DD867 pKa = 3.74 SQTSVSSMAGFSSNSAFSQTLDD889 pKa = 3.26 YY890 pKa = 10.42 QVRR893 pKa = 11.84 VNGHH897 pKa = 5.66 SLSQAMIAIATKK909 pKa = 10.61 SMPVHH914 pKa = 4.82 MRR916 pKa = 11.84 LRR918 pKa = 11.84 VFTLATRR925 pKa = 11.84 LSQIPAQYY933 pKa = 9.88 RR934 pKa = 11.84 RR935 pKa = 11.84 AWFNGEE941 pKa = 3.95 FGFLPVVDD949 pKa = 4.74 CGSAKK954 pKa = 10.21 LNSMVRR960 pKa = 11.84 WMTMSMVEE968 pKa = 3.87 SDD970 pKa = 2.94 IARR973 pKa = 11.84 YY974 pKa = 8.96 LVGTKK979 pKa = 9.88 RR980 pKa = 11.84 EE981 pKa = 3.74 IVIRR985 pKa = 11.84 VAGLEE990 pKa = 3.91 QRR992 pKa = 11.84 VRR994 pKa = 11.84 RR995 pKa = 11.84 YY996 pKa = 9.67 VLSTVRR1002 pKa = 11.84 RR1003 pKa = 11.84 MGITHH1008 pKa = 7.56 LSDD1011 pKa = 3.1
Molecular weight: 113.22 kDa
Isoelectric point according different methods:
IPC2.protein.svr19 8.673
IPC2_protein 8.58
IPC_protein 8.492
Toseland 9.033
ProMoST 8.975
Dawson 9.399
Bjellqvist 9.253
Wikipedia 9.589
Rodwell 9.545
Grimsley 9.458
Solomon 9.428
Lehninger 9.385
Nozaki 9.326
DTASelect 9.165
Thurlkill 9.253
EMBOSS 9.516
Sillero 9.414
Patrickios 4.736
IPC_peptide 9.428
IPC2_peptide 7.98
IPC2.peptide.svr19 7.732
Peptides (in silico digests for buttom-up proteomics)
Below you can find
in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.
Try ESI
ChTry ESI
ArgC ESI
LysN ESI
TryLysC ESI
Try MALDI
ChTry MALDI
ArgC MALDI
LysN MALDI
TryLysC MALDI
Try LTQ
ChTry LTQ
ArgC LTQ
LysN LTQ
TryLysC LTQ
Try MSlow
ChTry MSlow
ArgC MSlow
LysN MSlow
TryLysC MSlow
Try MShigh
ChTry MShigh
ArgC MShigh
LysN MShigh
TryLysC MShigh
General Statistics
Number of major isoforms
Number of additional isoforms
Number of all proteins
Number of amino acids
Min. Seq. Length
Max. Seq. Length
Avg. Seq. Length
Avg. Mol. Weight
2
0
2
2307
1011
1296
1153.5
126.99
Amino acid frequency
Ala
Cys
Asp
Glu
Phe
Gly
His
Ile
Lys
Leu
11.704 ± 1.862
0.91 ± 0.11
4.898 ± 0.216
5.678 ± 0.148
3.164 ± 0.553
7.542 ± 0.384
2.818 ± 0.216
3.381 ± 0.48
3.208 ± 0.833
9.189 ± 0.129
Met
Asn
Gln
Pro
Arg
Ser
Thr
Val
Trp
Tyr
2.687 ± 0.604
3.034 ± 0.266
4.811 ± 0.469
3.078 ± 0.498
7.932 ± 0.319
7.022 ± 0.185
5.895 ± 0.455
7.932 ± 0.111
1.777 ± 0.063
3.338 ± 0.107
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level
Most of the basic statistics you can see at this page can be downloaded from this CSV file
For dipeptide frequency statistics click here