Panthera leo polyomavirus 1

Taxonomy: Viruses; Monodnaviria; Shotokuvirae; Cossaviricota; Papovaviricetes; Sepolyvirales; Polyomaviridae; Betapolyomavirus

Average proteome isoelectric point is 6.56

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 10 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A2S1CJP5|A0A2S1CJP5_9POLY 83T protein OS=Panthera leo polyomavirus 1 OX=2170405 GN=83T PE=4 SV=1
MM1 pKa = 7.46FFILGMGALLAVLAEE16 pKa = 4.28VFDD19 pKa = 4.55LATAAGVGIDD29 pKa = 4.51AILSGEE35 pKa = 4.16ALATAEE41 pKa = 4.06ALEE44 pKa = 4.3AFVTNLVTLEE54 pKa = 4.21GFTEE58 pKa = 4.44AEE60 pKa = 3.93ALAAAGITQEE70 pKa = 4.63ALTAFNQFGAVFPQLYY86 pKa = 9.98AALAVDD92 pKa = 4.34SVAIGSALAASLAPYY107 pKa = 9.29NYY109 pKa = 10.48SYY111 pKa = 7.65TTPIANLNMALIPYY125 pKa = 9.68IGEE128 pKa = 3.87LDD130 pKa = 3.41IYY132 pKa = 10.77FPGAMHH138 pKa = 7.42IARR141 pKa = 11.84FIHH144 pKa = 6.85YY145 pKa = 9.6IDD147 pKa = 3.75PTNWAVDD154 pKa = 4.29LYY156 pKa = 10.52QALGRR161 pKa = 11.84YY162 pKa = 7.21VWEE165 pKa = 4.45GLQRR169 pKa = 11.84AGQRR173 pKa = 11.84FLDD176 pKa = 3.78NQRR179 pKa = 11.84LQLEE183 pKa = 4.28HH184 pKa = 6.68ATRR187 pKa = 11.84EE188 pKa = 4.0LAQRR192 pKa = 11.84GAQTAAEE199 pKa = 4.04ALAQYY204 pKa = 10.03FEE206 pKa = 4.14NARR209 pKa = 11.84WAISNFNPQNLYY221 pKa = 10.59RR222 pKa = 11.84GLEE225 pKa = 3.74NYY227 pKa = 9.02YY228 pKa = 10.53RR229 pKa = 11.84QLPPLNPIQRR239 pKa = 11.84RR240 pKa = 11.84QLDD243 pKa = 3.49RR244 pKa = 11.84RR245 pKa = 11.84AGLPVPDD252 pKa = 3.66RR253 pKa = 11.84VLAIEE258 pKa = 5.16DD259 pKa = 3.73NVKK262 pKa = 10.54SADD265 pKa = 3.59YY266 pKa = 10.47VEE268 pKa = 6.05RR269 pKa = 11.84YY270 pKa = 9.36APPGGAFQRR279 pKa = 11.84QTPDD283 pKa = 2.11WMLPLILGLYY293 pKa = 10.41GDD295 pKa = 5.31INPSWGDD302 pKa = 3.24TLTQLEE308 pKa = 4.98KK309 pKa = 11.08EE310 pKa = 4.69DD311 pKa = 4.31GPPSKK316 pKa = 10.22KK317 pKa = 9.85RR318 pKa = 11.84KK319 pKa = 8.05KK320 pKa = 9.17TII322 pKa = 3.26

Molecular weight: 35.46 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A2S1CJQ6|A0A2S1CJQ6_9POLY 181T protein OS=Panthera leo polyomavirus 1 OX=2170405 GN=181T PE=4 SV=1
MM1 pKa = 7.6DD2 pKa = 6.14HH3 pKa = 7.11ILTRR7 pKa = 11.84EE8 pKa = 3.63EE9 pKa = 4.28SKK11 pKa = 11.2RR12 pKa = 11.84LMEE15 pKa = 4.97LLNLPMTEE23 pKa = 4.1YY24 pKa = 11.46GNFPLMRR31 pKa = 11.84RR32 pKa = 11.84AFLKK36 pKa = 10.24ACKK39 pKa = 9.45ILHH42 pKa = 6.55PDD44 pKa = 2.86KK45 pKa = 11.28GGNAEE50 pKa = 4.03QAQEE54 pKa = 4.5LISLYY59 pKa = 10.54RR60 pKa = 11.84KK61 pKa = 10.2LEE63 pKa = 3.91EE64 pKa = 4.73SLPSLNPQEE73 pKa = 5.69SFTTDD78 pKa = 2.75QKK80 pKa = 11.17KK81 pKa = 9.21QEE83 pKa = 4.1QEE85 pKa = 4.18TQGLGCMLLLRR96 pKa = 11.84MLYY99 pKa = 9.82SLVWAGIYY107 pKa = 9.23LLCLLLLDD115 pKa = 4.93GNNSQFTLWLLEE127 pKa = 3.83YY128 pKa = 10.12LVWKK132 pKa = 10.24ILMRR136 pKa = 11.84GNPNPAPASSKK147 pKa = 9.23EE148 pKa = 4.24EE149 pKa = 3.96KK150 pKa = 10.52GNPPMTLPPAPKK162 pKa = 8.91PRR164 pKa = 11.84HH165 pKa = 5.92RR166 pKa = 11.84KK167 pKa = 8.53SQLSKK172 pKa = 10.47KK173 pKa = 9.03KK174 pKa = 10.03KK175 pKa = 8.68KK176 pKa = 9.78SRR178 pKa = 11.84RR179 pKa = 11.84TWW181 pKa = 2.86

Molecular weight: 20.96 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

10

0

10

3005

83

713

300.5

34.31

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

6.29 ± 1.034

2.762 ± 0.513

5.125 ± 0.409

7.488 ± 0.347

4.592 ± 0.447

5.358 ± 0.485

1.364 ± 0.148

5.125 ± 0.372

6.955 ± 0.749

11.78 ± 0.673

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.662 ± 0.342

4.992 ± 0.119

5.857 ± 0.663

4.759 ± 0.318

5.291 ± 0.347

5.691 ± 0.482

4.626 ± 0.269

4.393 ± 0.524

1.231 ± 0.167

3.661 ± 0.337
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski