Aureitalea sp. RR4-38

Taxonomy: cellular organisms; Bacteria; FCB group; Bacteroidetes/Chlorobi group; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Pukyongia

Average proteome isoelectric point is 6.23

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 2826 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A2S0HXP2|A0A2S0HXP2_9FLAO Uncharacterized protein OS=Aureitalea sp. RR4-38 OX=2094025 GN=C5O00_09530 PE=4 SV=1
MM1 pKa = 7.76KK2 pKa = 10.26ILIPSVLQVVLLFNFALIYY21 pKa = 10.51GQAQFEE27 pKa = 4.34NQAEE31 pKa = 4.3SLGAGIAYY39 pKa = 10.29GNIQLGAGVSFFDD52 pKa = 4.32YY53 pKa = 11.33NNDD56 pKa = 3.41GLDD59 pKa = 4.84DD60 pKa = 3.67ITIPASNSRR69 pKa = 11.84NFTFLKK75 pKa = 10.91NMGGTFQEE83 pKa = 4.4EE84 pKa = 4.16NLGIDD89 pKa = 3.4SNGFQSRR96 pKa = 11.84QAMWVDD102 pKa = 4.15FDD104 pKa = 4.93NDD106 pKa = 3.21GDD108 pKa = 3.93NDD110 pKa = 3.82FFATSDD116 pKa = 3.68QDD118 pKa = 3.24WSRR121 pKa = 11.84LYY123 pKa = 10.81QNNGDD128 pKa = 3.9GTFTDD133 pKa = 3.16ITLAAGLPTVIYY145 pKa = 8.37DD146 pKa = 3.81TYY148 pKa = 10.11GAAWGDD154 pKa = 4.01FNNDD158 pKa = 2.18RR159 pKa = 11.84HH160 pKa = 7.45LDD162 pKa = 3.5VFYY165 pKa = 10.87SIRR168 pKa = 11.84DD169 pKa = 3.55EE170 pKa = 4.1NQIIPNILYY179 pKa = 10.31QNNGDD184 pKa = 3.78GTFTNVTIAAGLEE197 pKa = 4.14TTGYY201 pKa = 11.15LSFCASFFDD210 pKa = 3.8MDD212 pKa = 4.36KK213 pKa = 11.5DD214 pKa = 3.82GDD216 pKa = 3.61QDD218 pKa = 5.11LYY220 pKa = 11.14VANDD224 pKa = 3.93KK225 pKa = 11.05YY226 pKa = 11.4DD227 pKa = 3.71SPNLMYY233 pKa = 10.67RR234 pKa = 11.84NNGDD238 pKa = 3.44GTFTNVSASSGTGIEE253 pKa = 3.94IDD255 pKa = 4.26AMSTTIGDD263 pKa = 3.88YY264 pKa = 11.56NNDD267 pKa = 3.25GWLDD271 pKa = 3.34IYY273 pKa = 9.74VTNTEE278 pKa = 4.37FTPPPPGVNGNVLFRR293 pKa = 11.84NNADD297 pKa = 3.39GTFTNVAASTGTIFNSVGWGAVFLDD322 pKa = 4.02GDD324 pKa = 3.96NEE326 pKa = 4.46GFTDD330 pKa = 4.96LYY332 pKa = 11.04VSGEE336 pKa = 4.17FEE338 pKa = 4.18VDD340 pKa = 3.31PVYY343 pKa = 10.83LPSAYY348 pKa = 10.4YY349 pKa = 10.22EE350 pKa = 4.11NQGDD354 pKa = 4.0HH355 pKa = 6.22TFVIPTGIGFEE366 pKa = 3.99NDD368 pKa = 2.76TRR370 pKa = 11.84QSYY373 pKa = 10.96GNAIGDD379 pKa = 4.04IDD381 pKa = 4.27NDD383 pKa = 4.45GYY385 pKa = 10.47PDD387 pKa = 3.25IVVMNNNDD395 pKa = 3.26QNIFLWKK402 pKa = 8.38NTSIQNHH409 pKa = 5.04NWLKK413 pKa = 10.86VKK415 pKa = 11.08LEE417 pKa = 3.99GTQGNRR423 pKa = 11.84MGIGSFIEE431 pKa = 4.01VGTTHH436 pKa = 6.73GTQLQFTVCGEE447 pKa = 4.37GYY449 pKa = 10.46LGQNSAYY456 pKa = 10.11EE457 pKa = 4.1FFGLNDD463 pKa = 3.41ATNVDD468 pKa = 4.85FVRR471 pKa = 11.84VTWPSGIVDD480 pKa = 3.76YY481 pKa = 11.46FEE483 pKa = 5.25DD484 pKa = 4.37LNVNQHH490 pKa = 4.36ITIIEE495 pKa = 4.19GTGILSSDD503 pKa = 3.57SASFAVFSMYY513 pKa = 10.41PNPASEE519 pKa = 4.77LVFLNFPSEE528 pKa = 4.25AEE530 pKa = 4.04RR531 pKa = 11.84QLVVLDD537 pKa = 3.52VTGKK541 pKa = 9.93VVISEE546 pKa = 4.45EE547 pKa = 4.05IFGNTHH553 pKa = 6.05QMDD556 pKa = 4.49LSVISGGVYY565 pKa = 9.11IVEE568 pKa = 3.98VRR570 pKa = 11.84FNGNVHH576 pKa = 6.09RR577 pKa = 11.84KK578 pKa = 9.71KK579 pKa = 10.65LIKK582 pKa = 10.15HH583 pKa = 5.84

Molecular weight: 64.21 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A2S0HTP0|A0A2S0HTP0_9FLAO DNA gyrase subunit B OS=Aureitalea sp. RR4-38 OX=2094025 GN=gyrB PE=3 SV=1
MM1 pKa = 7.46SFNSASFKK9 pKa = 10.55AASLRR14 pKa = 11.84ANSFIAASFSAASFIAASFNAASFNAASFKK44 pKa = 10.65AASLRR49 pKa = 11.84ANSFNAASFRR59 pKa = 11.84AASLRR64 pKa = 11.84AASFMAASFKK74 pKa = 10.78AASFKK79 pKa = 10.77AASLRR84 pKa = 11.84AASFF88 pKa = 3.37

Molecular weight: 8.94 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

2826

0

2826

970976

38

4750

343.6

38.62

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

6.757 ± 0.041

0.762 ± 0.017

5.857 ± 0.057

6.83 ± 0.053

5.045 ± 0.037

6.828 ± 0.052

1.79 ± 0.025

7.438 ± 0.039

6.686 ± 0.076

9.28 ± 0.055

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.329 ± 0.024

5.63 ± 0.044

3.687 ± 0.035

3.264 ± 0.024

4.003 ± 0.042

6.401 ± 0.035

5.842 ± 0.073

6.493 ± 0.043

1.075 ± 0.017

4.002 ± 0.034
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski