Gyrovirus Tu789

Taxonomy: Viruses; Anelloviridae; Gyrovirus; Gyrovirus homsa2

Average proteome isoelectric point is 7.77

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 3 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|U5UAJ3|U5UAJ3_9VIRU Apoptin OS=Gyrovirus Tu789 OX=1415628 PE=3 SV=1
MM1 pKa = 7.57SSGGVEE7 pKa = 3.92STPPGEE13 pKa = 4.05TRR15 pKa = 11.84PAGGSEE21 pKa = 4.1SPFRR25 pKa = 11.84RR26 pKa = 11.84EE27 pKa = 3.91GQRR30 pKa = 11.84GPSGAGYY37 pKa = 9.29PGEE40 pKa = 4.26TLTPSPRR47 pKa = 11.84GHH49 pKa = 5.22VRR51 pKa = 11.84KK52 pKa = 9.96HH53 pKa = 5.59IDD55 pKa = 4.23GIVASNKK62 pKa = 9.1FVSVGWDD69 pKa = 3.08SLQRR73 pKa = 11.84DD74 pKa = 4.39PNWTRR79 pKa = 11.84QCYY82 pKa = 9.25NRR84 pKa = 11.84AIASWLRR91 pKa = 11.84NCARR95 pKa = 11.84THH97 pKa = 7.67DD98 pKa = 4.69EE99 pKa = 4.4ICNCGQWRR107 pKa = 11.84RR108 pKa = 11.84HH109 pKa = 4.91WFQEE113 pKa = 4.31CAGLEE118 pKa = 4.22DD119 pKa = 5.15ASSQTEE125 pKa = 4.03DD126 pKa = 3.33PRR128 pKa = 11.84AQEE131 pKa = 3.71DD132 pKa = 3.66LRR134 pKa = 11.84RR135 pKa = 11.84LRR137 pKa = 11.84EE138 pKa = 3.79SGAAAKK144 pKa = 10.27RR145 pKa = 11.84KK146 pKa = 9.47LDD148 pKa = 4.0YY149 pKa = 10.43IDD151 pKa = 3.87RR152 pKa = 11.84CKK154 pKa = 10.58KK155 pKa = 10.06RR156 pKa = 11.84PKK158 pKa = 9.0TVTWFDD164 pKa = 3.24TGEE167 pKa = 4.11EE168 pKa = 4.16PDD170 pKa = 3.62VPEE173 pKa = 4.95GFFTPSEE180 pKa = 4.47DD181 pKa = 3.43EE182 pKa = 4.79DD183 pKa = 6.34GYY185 pKa = 10.88DD186 pKa = 3.43TDD188 pKa = 3.51VDD190 pKa = 3.64EE191 pKa = 5.35DD192 pKa = 4.07AVPGGVNFDD201 pKa = 3.95MRR203 pKa = 11.84VEE205 pKa = 4.26DD206 pKa = 4.09PFLNALRR213 pKa = 11.84GGSTTRR219 pKa = 11.84IQGPTWW225 pKa = 3.22

Molecular weight: 25.12 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|U5UA55|U5UA55_9VIRU Dual specificity protein phosphatase VP2 OS=Gyrovirus Tu789 OX=1415628 PE=3 SV=1
MM1 pKa = 6.6VRR3 pKa = 11.84YY4 pKa = 9.35RR5 pKa = 11.84RR6 pKa = 11.84RR7 pKa = 11.84ARR9 pKa = 11.84RR10 pKa = 11.84PRR12 pKa = 11.84GVFYY16 pKa = 11.07SLGRR20 pKa = 11.84RR21 pKa = 11.84GWIRR25 pKa = 11.84HH26 pKa = 3.82RR27 pKa = 11.84RR28 pKa = 11.84RR29 pKa = 11.84RR30 pKa = 11.84RR31 pKa = 11.84RR32 pKa = 11.84RR33 pKa = 11.84TWWGKK38 pKa = 8.44FRR40 pKa = 11.84HH41 pKa = 5.05ARR43 pKa = 11.84RR44 pKa = 11.84RR45 pKa = 11.84SFSQRR50 pKa = 11.84VKK52 pKa = 10.66RR53 pKa = 11.84RR54 pKa = 11.84FHH56 pKa = 6.18NPHH59 pKa = 6.89PGTYY63 pKa = 9.85LVRR66 pKa = 11.84LPRR69 pKa = 11.84PQTTLTIFFQGIVYY83 pKa = 9.57FPTAKK88 pKa = 9.68MYY90 pKa = 10.85ASRR93 pKa = 11.84NQLADD98 pKa = 3.63LNKK101 pKa = 9.23ITTCRR106 pKa = 11.84VGLMNINFRR115 pKa = 11.84EE116 pKa = 4.14FLLAALPLDD125 pKa = 4.57AYY127 pKa = 10.77SKK129 pKa = 10.87LGGPIVGPQYY139 pKa = 11.15VSGGGSSAGTHH150 pKa = 7.04DD151 pKa = 3.34EE152 pKa = 4.4TMWPFTARR160 pKa = 11.84PVTNKK165 pKa = 9.83QPGASPAEE173 pKa = 3.89WWRR176 pKa = 11.84WALLLMFPRR185 pKa = 11.84EE186 pKa = 3.78PNMFFRR192 pKa = 11.84QPQQPTLEE200 pKa = 4.06QMGEE204 pKa = 4.01IFGGWQLYY212 pKa = 8.37RR213 pKa = 11.84HH214 pKa = 6.77IKK216 pKa = 8.46TKK218 pKa = 9.5VAIMAAQDD226 pKa = 3.32GGAFSPVASLVSQNNYY242 pKa = 6.08FWRR245 pKa = 11.84RR246 pKa = 11.84QEE248 pKa = 3.83RR249 pKa = 11.84GTPKK253 pKa = 10.0TGEE256 pKa = 3.9PPMTGMIRR264 pKa = 11.84RR265 pKa = 11.84GTGSLEE271 pKa = 3.89SSKK274 pKa = 10.8PADD277 pKa = 3.74EE278 pKa = 4.79YY279 pKa = 11.38YY280 pKa = 10.3IPANPPNPPDD290 pKa = 3.38WPGEE294 pKa = 4.03SSAVIDD300 pKa = 3.91TPYY303 pKa = 10.56KK304 pKa = 9.35IAAVRR309 pKa = 11.84SKK311 pKa = 11.03SYY313 pKa = 10.74VYY315 pKa = 11.39SNMLFPSFSALSALGAAWAFPPGRR339 pKa = 11.84RR340 pKa = 11.84SVGRR344 pKa = 11.84GSFNRR349 pKa = 11.84HH350 pKa = 5.65TITGAGDD357 pKa = 3.53PQGKK361 pKa = 9.08KK362 pKa = 8.82WLTLVPKK369 pKa = 9.85KK370 pKa = 10.95VEE372 pKa = 4.33WITDD376 pKa = 3.41DD377 pKa = 3.76TMTQSEE383 pKa = 4.91IDD385 pKa = 3.45TTIATIYY392 pKa = 8.98VAQGAPKK399 pKa = 9.73ASGYY403 pKa = 10.5KK404 pKa = 9.78FQTFQGPLVDD414 pKa = 5.69DD415 pKa = 4.75PLSVQPWAVMRR426 pKa = 11.84VKK428 pKa = 10.67SVWQLGNLRR437 pKa = 11.84RR438 pKa = 11.84PYY440 pKa = 9.58PWDD443 pKa = 3.54VNWYY447 pKa = 9.18NQVADD452 pKa = 3.51WW453 pKa = 4.03

Molecular weight: 51.86 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

3

0

3

789

111

453

263.0

29.53

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

7.478 ± 0.476

1.394 ± 0.944

4.816 ± 1.359

4.563 ± 1.397

3.802 ± 1.045

8.745 ± 0.689

1.521 ± 0.145

3.676 ± 0.362

3.676 ± 0.417

6.337 ± 1.264

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.028 ± 0.659

3.295 ± 0.202

7.858 ± 0.942

4.056 ± 0.71

10.266 ± 0.103

7.605 ± 1.458

7.351 ± 1.265

5.577 ± 0.253

3.169 ± 0.839

2.788 ± 0.995
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski