Bat coronavirus HKU5 (BtCoV) (BtCoV/HKU5/2004)
Average proteome isoelectric point is 7.25
Get precalculated fractions of proteins
Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
All
Note: above files contain also dissociation constants (pKa)
Virtual 2D-PAGE plot for 10 proteins (isoelectric point calculated using IPC2_protein)
Get csv file with sequences according to given criteria:
* You can choose from 21 different methods for calculating isoelectric point
Summary statistics related to proteome-wise predictions
Protein with the lowest isoelectric point:
>sp|A3EXD1|NS3A_BCHK5 Non-structural protein 3a OS=Bat coronavirus HKU5 OX=694008 GN=3a PE=3 SV=1
MM1 pKa = 7.16 IRR3 pKa = 11.84 SVLVLMCSLTFIGNLTRR20 pKa = 11.84 GQSVDD25 pKa = 3.09 MGHH28 pKa = 6.56 NGTGSCLDD36 pKa = 3.67 SQVQPDD42 pKa = 4.15 YY43 pKa = 11.05 FEE45 pKa = 5.36 SVHH48 pKa = 5.43 TTWPMPIDD56 pKa = 3.44 TSKK59 pKa = 11.52 AEE61 pKa = 4.0 GVIYY65 pKa = 10.04 PNGKK69 pKa = 9.38 SYY71 pKa = 11.79 SNITLTYY78 pKa = 8.48 TGLYY82 pKa = 9.29 PKK84 pKa = 10.87 ANDD87 pKa = 3.99 LGKK90 pKa = 10.44 QYY92 pKa = 10.84 LFSDD96 pKa = 4.14 GHH98 pKa = 5.51 SAPGRR103 pKa = 11.84 LNNLFVSNYY112 pKa = 8.4 SSQVEE117 pKa = 4.3 SFDD120 pKa = 3.77 DD121 pKa = 4.42 GFVVRR126 pKa = 11.84 IGAAANKK133 pKa = 9.28 TGTTVISQSTFKK145 pKa = 10.09 PIKK148 pKa = 9.78 KK149 pKa = 9.62 IYY151 pKa = 8.89 PAFLLGHH158 pKa = 5.68 SVGNYY163 pKa = 7.01 TPSNRR168 pKa = 11.84 TGRR171 pKa = 11.84 YY172 pKa = 8.95 LNHH175 pKa = 6.74 TLVILPDD182 pKa = 3.55 GCGTILHH189 pKa = 7.04 AFYY192 pKa = 10.81 CVLHH196 pKa = 6.74 PRR198 pKa = 11.84 TQQNCAGEE206 pKa = 4.56 TNFKK210 pKa = 10.74 SLSLWDD216 pKa = 4.4 TPASDD221 pKa = 4.53 CVSGSYY227 pKa = 9.41 NQEE230 pKa = 3.54 ATLGAFKK237 pKa = 10.95 VYY239 pKa = 10.44 FDD241 pKa = 6.08 LINCTFRR248 pKa = 11.84 YY249 pKa = 10.19 NYY251 pKa = 9.77 TITEE255 pKa = 4.22 DD256 pKa = 4.48 EE257 pKa = 3.97 NAEE260 pKa = 4.14 WFGITQDD267 pKa = 3.47 TQGVHH272 pKa = 6.7 LYY274 pKa = 10.45 SSRR277 pKa = 11.84 KK278 pKa = 9.46 EE279 pKa = 3.81 NVFRR283 pKa = 11.84 NNMFHH288 pKa = 7.46 FATLPVYY295 pKa = 10.33 QKK297 pKa = 10.09 ILYY300 pKa = 7.25 YY301 pKa = 9.63 TVIPRR306 pKa = 11.84 SIRR309 pKa = 11.84 SPFNDD314 pKa = 2.95 RR315 pKa = 11.84 KK316 pKa = 10.37 AWAAFYY322 pKa = 9.99 IYY324 pKa = 10.33 KK325 pKa = 10.23 LHH327 pKa = 7.02 PLTYY331 pKa = 10.54 LLNFDD336 pKa = 3.62 VEE338 pKa = 4.81 GYY340 pKa = 7.31 ITKK343 pKa = 10.51 AVDD346 pKa = 3.43 CGYY349 pKa = 11.23 DD350 pKa = 4.06 DD351 pKa = 5.81 LAQLQCSYY359 pKa = 11.37 EE360 pKa = 4.24 SFEE363 pKa = 4.45 VEE365 pKa = 3.78 TGVYY369 pKa = 9.84 SVSSFEE375 pKa = 3.78 ASPRR379 pKa = 11.84 GEE381 pKa = 4.58 FIEE384 pKa = 4.21 QATTQEE390 pKa = 4.29 CDD392 pKa = 3.74 FTPMLTGTPPPIYY405 pKa = 9.95 NFKK408 pKa = 10.75 RR409 pKa = 11.84 LVFTNCNYY417 pKa = 10.82 NLTKK421 pKa = 10.58 LLSLFQVSEE430 pKa = 4.71 FSCHH434 pKa = 4.9 QVSPSSLATGCYY446 pKa = 9.95 SSLTVDD452 pKa = 3.43 YY453 pKa = 9.87 FAYY456 pKa = 8.82 STDD459 pKa = 3.07 MSSYY463 pKa = 9.68 LQPGSAGAIVQFNYY477 pKa = 10.33 KK478 pKa = 9.78 QDD480 pKa = 3.66 FSNPTCRR487 pKa = 11.84 VLATVPQNLTTITKK501 pKa = 8.73 PSNYY505 pKa = 10.1 AYY507 pKa = 9.51 LTEE510 pKa = 4.67 CYY512 pKa = 7.89 KK513 pKa = 10.6 TSAYY517 pKa = 9.25 GKK519 pKa = 9.32 NYY521 pKa = 10.18 LYY523 pKa = 10.26 NAPGAYY529 pKa = 8.3 TPCLSLASRR538 pKa = 11.84 GFSTKK543 pKa = 10.14 YY544 pKa = 9.57 QSHH547 pKa = 6.82 SDD549 pKa = 3.76 GEE551 pKa = 4.52 LTTTGYY557 pKa = 10.29 IYY559 pKa = 10.33 PVTGNLQMAFIISVQYY575 pKa = 9.07 GTDD578 pKa = 3.55 TNSVCPMQALRR589 pKa = 11.84 NDD591 pKa = 3.48 TSIEE595 pKa = 4.13 DD596 pKa = 3.73 KK597 pKa = 11.26 LDD599 pKa = 3.35 VCVEE603 pKa = 3.97 YY604 pKa = 10.66 SLHH607 pKa = 6.69 GITGRR612 pKa = 11.84 GVFHH616 pKa = 7.07 NCTSVGLRR624 pKa = 11.84 NQRR627 pKa = 11.84 FVYY630 pKa = 9.22 DD631 pKa = 3.57 TFDD634 pKa = 3.52 NLVGYY639 pKa = 10.57 HH640 pKa = 6.66 SDD642 pKa = 3.15 NGNYY646 pKa = 9.55 YY647 pKa = 9.96 CVRR650 pKa = 11.84 PCVSVPVSVIYY661 pKa = 10.76 DD662 pKa = 3.52 KK663 pKa = 11.4 ASNSHH668 pKa = 5.69 ATLFGSVACSHH679 pKa = 5.84 VTTMMSQFSRR689 pKa = 11.84 MTKK692 pKa = 9.37 TNLLARR698 pKa = 11.84 TTPGPLQTTVGCAMGFINSSMVVDD722 pKa = 4.66 EE723 pKa = 4.72 CQLPLGQSLCAIPPTTSSRR742 pKa = 11.84 VRR744 pKa = 11.84 RR745 pKa = 11.84 ATSGASDD752 pKa = 3.62 VFQIATLNFTSPLTLAPINSTGFVVAVPTNFTFGVTQEE790 pKa = 4.56 FIEE793 pKa = 4.32 TTIQKK798 pKa = 8.34 ITVDD802 pKa = 3.89 CKK804 pKa = 10.81 QYY806 pKa = 10.53 VCNGFKK812 pKa = 10.45 KK813 pKa = 10.92 CEE815 pKa = 4.15 DD816 pKa = 3.47 LLKK819 pKa = 10.63 EE820 pKa = 4.03 YY821 pKa = 10.97 GQFCSKK827 pKa = 10.24 INQALHH833 pKa = 5.92 GANLRR838 pKa = 11.84 QDD840 pKa = 3.5 EE841 pKa = 4.74 SIANLFSSIKK851 pKa = 8.36 TQNTQPLQAGLNGDD865 pKa = 4.19 FNLTMLQIPQVTTGEE880 pKa = 3.87 RR881 pKa = 11.84 KK882 pKa = 9.32 YY883 pKa = 10.94 RR884 pKa = 11.84 STIEE888 pKa = 4.38 DD889 pKa = 3.78 LLFNKK894 pKa = 7.82 VTIADD899 pKa = 3.7 PGYY902 pKa = 7.86 MQGYY906 pKa = 8.62 DD907 pKa = 2.97 EE908 pKa = 5.92 CMQQGPQSARR918 pKa = 11.84 DD919 pKa = 4.21 LICAQYY925 pKa = 9.2 VAGYY929 pKa = 9.86 KK930 pKa = 9.71 VLPPLYY936 pKa = 9.9 DD937 pKa = 3.96 PYY939 pKa = 10.78 MEE941 pKa = 4.81 AAYY944 pKa = 9.18 TSSLLGSIAGASWTAGLSSFAAIPFAQSIFYY975 pKa = 10.26 RR976 pKa = 11.84 LNGVGITQQVLSEE989 pKa = 4.05 NQKK992 pKa = 10.46 IIANKK997 pKa = 9.42 FNQALGAMQTGFTTTNLAFNKK1018 pKa = 9.95 VQDD1021 pKa = 3.97 AVNANAMALSKK1032 pKa = 10.7 LAAEE1036 pKa = 4.98 LSNTFGAISSSISDD1050 pKa = 3.1 ILARR1054 pKa = 11.84 LDD1056 pKa = 3.62 TVEE1059 pKa = 5.08 QEE1061 pKa = 4.13 AQIDD1065 pKa = 3.71 RR1066 pKa = 11.84 LINGRR1071 pKa = 11.84 LTSLNAFVAQQLVRR1085 pKa = 11.84 TEE1087 pKa = 3.65 AAARR1091 pKa = 11.84 SAQLAQDD1098 pKa = 3.82 KK1099 pKa = 11.07 VNEE1102 pKa = 4.39 CVKK1105 pKa = 10.74 SQSKK1109 pKa = 10.87 RR1110 pKa = 11.84 NGFCGTGTHH1119 pKa = 5.85 IVSFAINAPNGLYY1132 pKa = 10.03 FFHH1135 pKa = 7.75 VGYY1138 pKa = 10.58 QPTSHH1143 pKa = 6.33 VNATAAYY1150 pKa = 8.36 GLCNTEE1156 pKa = 4.45 NPQKK1160 pKa = 10.6 CIAPIDD1166 pKa = 4.22 GYY1168 pKa = 11.21 FVLNQTTSTVADD1180 pKa = 4.45 SDD1182 pKa = 3.99 QQWYY1186 pKa = 7.3 YY1187 pKa = 9.08 TGSSFFHH1194 pKa = 6.96 PEE1196 pKa = 4.31 PITEE1200 pKa = 4.24 ANSKK1204 pKa = 8.77 YY1205 pKa = 11.08 VSMDD1209 pKa = 3.11 VKK1211 pKa = 11.03 FEE1213 pKa = 4.13 NLTNRR1218 pKa = 11.84 LPPPLLSNSTDD1229 pKa = 3.39 LDD1231 pKa = 3.81 FKK1233 pKa = 11.54 EE1234 pKa = 4.12 EE1235 pKa = 4.03 LEE1237 pKa = 4.22 EE1238 pKa = 4.02 FFKK1241 pKa = 11.25 NVSSQGPNFQEE1252 pKa = 3.42 ISKK1255 pKa = 10.78 INTTLLNLNTEE1266 pKa = 4.26 LMVLSEE1272 pKa = 4.38 VVKK1275 pKa = 10.44 QLNEE1279 pKa = 3.95 SYY1281 pKa = 10.82 IDD1283 pKa = 3.87 LKK1285 pKa = 11.29 EE1286 pKa = 4.03 LGNYY1290 pKa = 7.36 TFYY1293 pKa = 11.09 QKK1295 pKa = 10.17 WPWYY1299 pKa = 8.52 IWLGFIAGLVALALCVFFILCCTGCGTSCLGKK1331 pKa = 10.25 LKK1333 pKa = 10.69 CNRR1336 pKa = 11.84 CCDD1339 pKa = 3.46 SYY1341 pKa = 12.06 DD1342 pKa = 3.43 EE1343 pKa = 4.74 YY1344 pKa = 10.97 EE1345 pKa = 4.0 VEE1347 pKa = 4.86 KK1348 pKa = 10.84 IHH1350 pKa = 6.28 VHH1352 pKa = 5.56
Molecular weight: 149.7 kDa
Isoelectric point according different methods:
IPC2.protein.svr19 5.421
IPC2_protein 5.537
IPC_protein 5.575
Toseland 5.804
ProMoST 5.855
Dawson 5.792
Bjellqvist 5.83
Wikipedia 5.792
Rodwell 5.766
Grimsley 5.868
Solomon 5.792
Lehninger 5.779
Nozaki 6.046
DTASelect 6.224
Thurlkill 6.198
EMBOSS 6.16
Sillero 6.148
Patrickios 0.731
IPC_peptide 5.817
IPC2_peptide 6.135
IPC2.peptide.svr19 6.032
Protein with the highest isoelectric point:
>sp|P0C6T5|R1A_BCHK5 Replicase polyprotein 1a OS=Bat coronavirus HKU5 OX=694008 GN=1a PE=3 SV=1
MM1 pKa = 7.4 ATPAPPRR8 pKa = 11.84 AVVFANDD15 pKa = 3.47 NEE17 pKa = 4.68 TPTNSQRR24 pKa = 11.84 SGRR27 pKa = 11.84 PRR29 pKa = 11.84 TKK31 pKa = 10.13 PRR33 pKa = 11.84 PAPNTTVSWFTGLTQHH49 pKa = 6.72 GKK51 pKa = 9.68 QPLAFPPGQGVPLNANSTPAQNAGYY76 pKa = 9.33 WRR78 pKa = 11.84 RR79 pKa = 11.84 QDD81 pKa = 3.96 RR82 pKa = 11.84 KK83 pKa = 10.03 INTGNGTKK91 pKa = 10.09 PLAPRR96 pKa = 11.84 WYY98 pKa = 9.82 FYY100 pKa = 10.45 YY101 pKa = 10.42 TGTGPEE107 pKa = 3.84 ANLPFRR113 pKa = 11.84 SVKK116 pKa = 10.66 DD117 pKa = 3.63 GIIWVHH123 pKa = 5.87 EE124 pKa = 4.29 NGATDD129 pKa = 3.49 APSVFGTRR137 pKa = 11.84 NPANDD142 pKa = 3.9 PAIVTQFAPGTTLPKK157 pKa = 10.23 NFHH160 pKa = 6.56 IEE162 pKa = 4.18 GTGGNSQSSSRR173 pKa = 11.84 ASSRR177 pKa = 11.84 SSSRR181 pKa = 11.84 SSSRR185 pKa = 11.84 NGRR188 pKa = 11.84 SNNSSRR194 pKa = 11.84 NASPAPHH201 pKa = 6.41 GVGDD205 pKa = 3.85 VVGAGTLSVLLDD217 pKa = 3.75 LQKK220 pKa = 11.11 RR221 pKa = 11.84 LADD224 pKa = 3.87 LEE226 pKa = 4.35 AGKK229 pKa = 10.82 GNKK232 pKa = 7.63 QPKK235 pKa = 10.13 VITKK239 pKa = 10.13 KK240 pKa = 10.37 DD241 pKa = 3.21 AQAAKK246 pKa = 10.25 QKK248 pKa = 9.14 MRR250 pKa = 11.84 HH251 pKa = 5.5 KK252 pKa = 10.47 RR253 pKa = 11.84 VATKK257 pKa = 10.47 GYY259 pKa = 10.6 NVVQAFGMRR268 pKa = 11.84 GPGPLQSNFGDD279 pKa = 3.44 MQYY282 pKa = 11.39 NKK284 pKa = 10.42 LGTEE288 pKa = 4.21 DD289 pKa = 4.05 PRR291 pKa = 11.84 WPQIAEE297 pKa = 4.2 LAPSASAFMSTSQFKK312 pKa = 8.73 VTHH315 pKa = 5.74 QSNDD319 pKa = 3.34 EE320 pKa = 4.17 NGEE323 pKa = 3.87 PVYY326 pKa = 10.52 FLSYY330 pKa = 10.63 SGAIKK335 pKa = 10.63 LDD337 pKa = 3.71 PKK339 pKa = 10.57 NPNYY343 pKa = 9.8 NKK345 pKa = 9.83 WMEE348 pKa = 4.15 ILDD351 pKa = 4.08 ANIDD355 pKa = 3.74 AYY357 pKa = 10.21 KK358 pKa = 10.59 SFPKK362 pKa = 10.11 KK363 pKa = 9.37 EE364 pKa = 4.04 RR365 pKa = 11.84 KK366 pKa = 9.04 QKK368 pKa = 10.65 PSGDD372 pKa = 3.97 DD373 pKa = 3.06 AATAPATSQMEE384 pKa = 4.7 DD385 pKa = 3.62 VPEE388 pKa = 4.56 LPPKK392 pKa = 7.94 QQRR395 pKa = 11.84 KK396 pKa = 8.62 KK397 pKa = 10.5 RR398 pKa = 11.84 VVQGSIPQRR407 pKa = 11.84 SAGVPSFEE415 pKa = 5.04 DD416 pKa = 3.28 VVDD419 pKa = 5.41 AIFPDD424 pKa = 4.2 SEE426 pKa = 4.17 AA427 pKa = 4.08
Molecular weight: 46.29 kDa
Isoelectric point according different methods:
IPC2.protein.svr19 9.072
IPC2_protein 9.297
IPC_protein 9.268
Toseland 10.16
ProMoST 9.736
Dawson 10.306
Bjellqvist 9.926
Wikipedia 10.438
Rodwell 10.818
Grimsley 10.365
Solomon 10.335
Lehninger 10.306
Nozaki 10.116
DTASelect 9.926
Thurlkill 10.175
EMBOSS 10.54
Sillero 10.218
Patrickios 10.482
IPC_peptide 10.335
IPC2_peptide 8.317
IPC2.peptide.svr19 8.355
Peptides (in silico digests for buttom-up proteomics)
Below you can find
in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.
Try ESI
ChTry ESI
ArgC ESI
LysN ESI
TryLysC ESI
Try MALDI
ChTry MALDI
ArgC MALDI
LysN MALDI
TryLysC MALDI
Try LTQ
ChTry LTQ
ArgC LTQ
LysN LTQ
TryLysC LTQ
Try MSlow
ChTry MSlow
ArgC MSlow
LysN MSlow
TryLysC MSlow
Try MShigh
ChTry MShigh
ArgC MShigh
LysN MShigh
TryLysC MShigh
General Statistics
Number of major isoforms
Number of additional isoforms
Number of all proteins
Number of amino acids
Min. Seq. Length
Max. Seq. Length
Avg. Seq. Length
Avg. Mol. Weight
10
0
10
14463
82
7182
1446.3
160.66
Amino acid frequency
Ala
Cys
Asp
Glu
Phe
Gly
His
Ile
Lys
Leu
7.585 ± 0.214
3.049 ± 0.264
5.352 ± 0.26
4.066 ± 0.135
4.653 ± 0.169
5.905 ± 0.177
2.026 ± 0.105
4.556 ± 0.157
5.317 ± 0.27
9.279 ± 0.389
Met
Asn
Gln
Pro
Arg
Ser
Thr
Val
Trp
Tyr
2.171 ± 0.109
5.22 ± 0.194
4.107 ± 0.504
3.423 ± 0.389
3.699 ± 0.322
7.488 ± 0.27
6.873 ± 0.295
9.196 ± 0.585
1.203 ± 0.097
4.826 ± 0.235
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level
Most of the basic statistics you can see at this page can be downloaded from this CSV file
For dipeptide frequency statistics click here