Adlercreutzia caecicola

Taxonomy: cellular organisms; Bacteria; Terrabacteria group; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Parvibacter

Average proteome isoelectric point is 5.73

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 1821 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A4T9TEF9|A0A4T9TEF9_9ACTN VanZ domain-containing protein OS=Adlercreutzia caecicola OX=747645 GN=E5982_02910 PE=4 SV=1
MM1 pKa = 7.15TRR3 pKa = 11.84QDD5 pKa = 3.77EE6 pKa = 4.17FDD8 pKa = 3.2AAARR12 pKa = 11.84ALRR15 pKa = 11.84ADD17 pKa = 4.33AEE19 pKa = 4.3QHH21 pKa = 5.97PVPASLQPEE30 pKa = 4.62AIEE33 pKa = 4.77AMLLAHH39 pKa = 7.47DD40 pKa = 4.42AQKK43 pKa = 11.23SDD45 pKa = 4.2GEE47 pKa = 4.58TADD50 pKa = 3.42SGQPASAAPAPVEE63 pKa = 4.27TGSAAAGTASPRR75 pKa = 11.84RR76 pKa = 11.84HH77 pKa = 5.01VTWRR81 pKa = 11.84WPIAAAACLALLCGVGVVGALAAQGKK107 pKa = 8.62FSPAAIDD114 pKa = 4.16APSSPLPAVSDD125 pKa = 4.22PSAPASPEE133 pKa = 4.14SGLSTAQGYY142 pKa = 8.72AQVRR146 pKa = 11.84DD147 pKa = 4.08CLLASQQAMGDD158 pKa = 3.43GGTMFMEE165 pKa = 5.3DD166 pKa = 2.95KK167 pKa = 9.88TAGVARR173 pKa = 11.84TEE175 pKa = 3.97TATAFTAQNSTKK187 pKa = 10.43DD188 pKa = 3.46SSFTDD193 pKa = 3.3TNEE196 pKa = 3.71RR197 pKa = 11.84TEE199 pKa = 4.81GIGEE203 pKa = 4.28ADD205 pKa = 3.53VAKK208 pKa = 10.16TDD210 pKa = 3.99GRR212 pKa = 11.84WLYY215 pKa = 11.12ALQDD219 pKa = 3.28SGTTVAIVDD228 pKa = 3.84PAEE231 pKa = 4.05GHH233 pKa = 5.17MTPAGAIEE241 pKa = 4.31APKK244 pKa = 9.8GAQVSEE250 pKa = 5.06FYY252 pKa = 11.33VEE254 pKa = 4.82DD255 pKa = 3.45GRR257 pKa = 11.84LYY259 pKa = 11.04LLSTVFPEE267 pKa = 5.44GVEE270 pKa = 4.28QPDD273 pKa = 3.59GTYY276 pKa = 9.82TFPPEE281 pKa = 3.86TTRR284 pKa = 11.84LDD286 pKa = 3.87VYY288 pKa = 11.33DD289 pKa = 3.75VTDD292 pKa = 3.91PANPQATGLLTQTGTYY308 pKa = 7.85NTVRR312 pKa = 11.84FADD315 pKa = 4.54GYY317 pKa = 11.24VYY319 pKa = 10.8LFSDD323 pKa = 2.84QWTYY327 pKa = 10.57DD328 pKa = 3.36TSEE331 pKa = 4.1GTDD334 pKa = 3.25PSAYY338 pKa = 9.62VPCVNGAAVEE348 pKa = 4.31CGDD351 pKa = 4.37IYY353 pKa = 11.08LPPEE357 pKa = 4.15NMGDD361 pKa = 3.39HH362 pKa = 6.27YY363 pKa = 11.65LVITTVDD370 pKa = 3.22AANPSAVVDD379 pKa = 4.28QKK381 pKa = 11.7AILCNGGSVYY391 pKa = 10.12MSQDD395 pKa = 3.36SIFLYY400 pKa = 8.58EE401 pKa = 3.93TTGYY405 pKa = 10.01NWGIMPIARR414 pKa = 11.84FAADD418 pKa = 5.26DD419 pKa = 3.64MAEE422 pKa = 4.31PAGEE426 pKa = 3.98TDD428 pKa = 5.17PIAEE432 pKa = 4.84AATEE436 pKa = 4.23DD437 pKa = 4.46PGDD440 pKa = 3.94APADD444 pKa = 3.43EE445 pKa = 4.82SEE447 pKa = 4.48NGEE450 pKa = 4.23EE451 pKa = 4.44APGATSPAEE460 pKa = 4.34GPDD463 pKa = 3.81GEE465 pKa = 5.13GVNDD469 pKa = 4.71DD470 pKa = 4.52PAVDD474 pKa = 5.09DD475 pKa = 4.76PATLPADD482 pKa = 4.36DD483 pKa = 5.26PATLPADD490 pKa = 4.19GPAAEE495 pKa = 4.49PQSPEE500 pKa = 4.12TPDD503 pKa = 3.77EE504 pKa = 4.12EE505 pKa = 4.45AQAPSDD511 pKa = 3.91NSADD515 pKa = 3.74DD516 pKa = 4.08PSEE519 pKa = 4.98GEE521 pKa = 4.11ADD523 pKa = 3.85TPDD526 pKa = 3.45SSGGDD531 pKa = 3.57DD532 pKa = 4.85PDD534 pKa = 4.23LKK536 pKa = 10.02TCIRR540 pKa = 11.84KK541 pKa = 8.06FTFDD545 pKa = 3.21KK546 pKa = 11.24GQLEE550 pKa = 4.47GVAQGEE556 pKa = 4.78VNGTLDD562 pKa = 4.42SSFCLDD568 pKa = 3.79EE569 pKa = 4.25YY570 pKa = 11.28NGYY573 pKa = 10.02LRR575 pKa = 11.84VVTTVYY581 pKa = 11.21GEE583 pKa = 4.27DD584 pKa = 3.34TSSALTVLNEE594 pKa = 3.78QMEE597 pKa = 4.72EE598 pKa = 3.9VGNIADD604 pKa = 3.86VAPGEE609 pKa = 4.26QVYY612 pKa = 9.88SARR615 pKa = 11.84FMGNVGYY622 pKa = 9.93FVTFKK627 pKa = 10.84QVDD630 pKa = 3.6PLFSVDD636 pKa = 4.92LSNPEE641 pKa = 3.77NPTIIGQLKK650 pKa = 9.15IPGFSEE656 pKa = 4.05YY657 pKa = 10.73LHH659 pKa = 7.02PYY661 pKa = 9.62GEE663 pKa = 4.14NLLLGIGMSADD674 pKa = 3.52DD675 pKa = 5.02AGATDD680 pKa = 4.4GVKK683 pKa = 10.78LSMFDD688 pKa = 3.28TSNPADD694 pKa = 3.54VRR696 pKa = 11.84EE697 pKa = 4.21VATAVLDD704 pKa = 3.48DD705 pKa = 4.4TYY707 pKa = 11.68YY708 pKa = 11.18SDD710 pKa = 3.95VFNEE714 pKa = 3.58YY715 pKa = 9.81RR716 pKa = 11.84AALIDD721 pKa = 4.08PASDD725 pKa = 3.4MIGFPVSTDD734 pKa = 2.98RR735 pKa = 11.84EE736 pKa = 4.25AYY738 pKa = 9.4AVYY741 pKa = 9.88GYY743 pKa = 10.67SEE745 pKa = 5.35DD746 pKa = 3.9NGFSQHH752 pKa = 5.82MLEE755 pKa = 4.41EE756 pKa = 4.57TNGTGWVPTRR766 pKa = 11.84GIRR769 pKa = 11.84IGDD772 pKa = 3.33VLYY775 pKa = 10.79VVKK778 pKa = 10.85GNAAEE783 pKa = 4.25SYY785 pKa = 10.61RR786 pKa = 11.84IGDD789 pKa = 3.59YY790 pKa = 10.99QKK792 pKa = 10.6IDD794 pKa = 3.63DD795 pKa = 4.63LLII798 pKa = 4.67

Molecular weight: 84.02 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A3N0ABY4|A0A3N0ABY4_9ACTN 10 kDa chaperonin OS=Adlercreutzia caecicola OX=747645 GN=groS PE=3 SV=1
MM1 pKa = 7.21TGGVGVIFLGVAVALAAVAGFGLAIGASALMRR33 pKa = 11.84RR34 pKa = 11.84RR35 pKa = 11.84RR36 pKa = 11.84LRR38 pKa = 11.84QTVATSAAAQGLGLSRR54 pKa = 11.84GASCVPGGARR64 pKa = 11.84AAPAVALLQAMEE76 pKa = 4.23LRR78 pKa = 11.84SRR80 pKa = 11.84ALSMGARR87 pKa = 11.84HH88 pKa = 6.25PLVPARR94 pKa = 11.84LLPAAASLEE103 pKa = 4.2KK104 pKa = 10.45AISHH108 pKa = 6.79AGLAGAVTVAGFWDD122 pKa = 4.36CSLLAALAGAVAGGLAGAAFSVEE145 pKa = 3.85LALIGLVAGGFAGFRR160 pKa = 11.84LPRR163 pKa = 11.84AVLARR168 pKa = 11.84AVQKK172 pKa = 10.73RR173 pKa = 11.84ADD175 pKa = 3.69DD176 pKa = 4.11LEE178 pKa = 5.74RR179 pKa = 11.84SLSEE183 pKa = 3.81MLEE186 pKa = 4.26VVALGLRR193 pKa = 11.84SGLSFEE199 pKa = 4.78GALALYY205 pKa = 7.49TAHH208 pKa = 6.94FEE210 pKa = 4.48CPLATGMAAAQAQWSCGLVSRR231 pKa = 11.84EE232 pKa = 3.56EE233 pKa = 4.01ALRR236 pKa = 11.84ALAASYY242 pKa = 10.74RR243 pKa = 11.84SLLFGRR249 pKa = 11.84VVEE252 pKa = 4.63TIVRR256 pKa = 11.84SIRR259 pKa = 11.84FGSSLADD266 pKa = 3.67NLDD269 pKa = 3.71DD270 pKa = 4.45AAAEE274 pKa = 4.01ARR276 pKa = 11.84AHH278 pKa = 5.8YY279 pKa = 7.96RR280 pKa = 11.84TARR283 pKa = 11.84QEE285 pKa = 4.4SVAKK289 pKa = 10.65APVKK293 pKa = 10.36MMLPTSTLILPAMLILVLGPVLLEE317 pKa = 4.14LMGG320 pKa = 4.35

Molecular weight: 32.65 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

1821

0

1821

688622

32

26543

378.2

41.02

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

12.038 ± 0.105

1.61 ± 0.065

5.705 ± 0.128

6.629 ± 0.056

3.81 ± 0.055

8.379 ± 0.063

1.663 ± 0.028

4.655 ± 0.085

3.724 ± 0.044

9.26 ± 0.143

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.634 ± 0.052

3.148 ± 0.137

4.76 ± 0.043

3.514 ± 0.029

5.527 ± 0.089

5.575 ± 0.048

5.283 ± 0.157

7.97 ± 0.055

1.21 ± 0.03

2.906 ± 0.093
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski