Flavonifractor plautii ATCC 29863

Taxonomy: cellular organisms; Bacteria; Terrabacteria group; Firmicutes; Clostridia; Eubacteriales; Oscillospiraceae; Flavonifractor; Flavonifractor plautii

Average proteome isoelectric point is 6.34

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 4278 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|G9YSZ6|G9YSZ6_FLAPL Uncharacterized protein OS=Flavonifractor plautii ATCC 29863 OX=411475 GN=HMPREF0372_02655 PE=4 SV=1
MM1 pKa = 7.28KK2 pKa = 10.01RR3 pKa = 11.84YY4 pKa = 9.47KK5 pKa = 10.2RR6 pKa = 11.84LYY8 pKa = 9.49VVLAVLLAACIATFALSRR26 pKa = 11.84YY27 pKa = 8.67KK28 pKa = 10.46AQKK31 pKa = 9.93EE32 pKa = 4.03QIQTSGEE39 pKa = 4.28TILSISADD47 pKa = 3.71EE48 pKa = 4.44VEE50 pKa = 4.51SLSWDD55 pKa = 3.36YY56 pKa = 11.76DD57 pKa = 3.54GQTLSFHH64 pKa = 7.47RR65 pKa = 11.84DD66 pKa = 3.33GAWSYY71 pKa = 12.05DD72 pKa = 3.51DD73 pKa = 5.67DD74 pKa = 4.57AAFPVDD80 pKa = 3.75AEE82 pKa = 4.25QMNLLLEE89 pKa = 4.26PFAAFGAAFIIEE101 pKa = 4.49DD102 pKa = 3.89VDD104 pKa = 4.92DD105 pKa = 4.69LGQYY109 pKa = 11.01GLDD112 pKa = 3.57NPVCTIRR119 pKa = 11.84ITAGGEE125 pKa = 3.78THH127 pKa = 7.53TIQLGDD133 pKa = 3.94YY134 pKa = 10.65SKK136 pKa = 10.58MDD138 pKa = 3.28AQRR141 pKa = 11.84YY142 pKa = 7.44VSIGDD147 pKa = 3.6GNVYY151 pKa = 10.24LAAHH155 pKa = 7.02DD156 pKa = 4.58PLDD159 pKa = 4.17EE160 pKa = 4.76FDD162 pKa = 3.63VTLDD166 pKa = 3.66EE167 pKa = 6.83LIDD170 pKa = 3.82QDD172 pKa = 5.31DD173 pKa = 3.89IPAFGQVSEE182 pKa = 4.68LRR184 pKa = 11.84FSGAEE189 pKa = 3.9NYY191 pKa = 9.78AVSYY195 pKa = 10.98QEE197 pKa = 5.66DD198 pKa = 3.51GGNTYY203 pKa = 10.6RR204 pKa = 11.84EE205 pKa = 3.89DD206 pKa = 3.22DD207 pKa = 3.91VYY209 pKa = 10.48FTEE212 pKa = 5.16RR213 pKa = 11.84DD214 pKa = 3.64GAQVPLDD221 pKa = 3.68PDD223 pKa = 3.21RR224 pKa = 11.84VEE226 pKa = 6.06DD227 pKa = 3.87YY228 pKa = 10.99LQAIQSLSLTDD239 pKa = 3.71CVTYY243 pKa = 10.59SANDD247 pKa = 4.67DD248 pKa = 3.67ISSPAAWTAPSS259 pKa = 3.32

Molecular weight: 28.66 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|G9YTJ7|G9YTJ7_FLAPL Uncharacterized protein OS=Flavonifractor plautii ATCC 29863 OX=411475 GN=HMPREF0372_02857 PE=4 SV=1
MM1 pKa = 7.5KK2 pKa = 10.12KK3 pKa = 9.97FHH5 pKa = 5.45VTRR8 pKa = 11.84KK9 pKa = 7.37TVLTIVGVTLPLTAAAILLRR29 pKa = 11.84RR30 pKa = 11.84LKK32 pKa = 10.08RR33 pKa = 11.84SRR35 pKa = 11.84RR36 pKa = 11.84ARR38 pKa = 11.84SVRR41 pKa = 11.84AA42 pKa = 3.42

Molecular weight: 4.79 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

4278

0

4278

1149482

37

3468

268.7

29.55

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

10.234 ± 0.052

1.615 ± 0.02

5.35 ± 0.037

6.85 ± 0.042

3.681 ± 0.029

8.395 ± 0.04

1.834 ± 0.021

5.085 ± 0.034

4.169 ± 0.045

10.394 ± 0.058

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.639 ± 0.02

3.058 ± 0.026

4.558 ± 0.031

3.388 ± 0.024

6.191 ± 0.045

5.319 ± 0.035

5.477 ± 0.039

7.231 ± 0.033

1.155 ± 0.014

3.377 ± 0.021
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski