Fowl aviadenovirus 4

Taxonomy: Viruses; Varidnaviria; Bamfordvirae; Preplasmiviricota; Tectiliviricetes; Rowavirales; Adenoviridae; Aviadenovirus; Fowl aviadenovirus C

Average proteome isoelectric point is 6.82

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 42 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A1B1SLH1|A0A1B1SLH1_9ADEN ORF2 OS=Fowl aviadenovirus 4 OX=130663 PE=4 SV=1
MM1 pKa = 8.07AEE3 pKa = 3.44EE4 pKa = 4.28WLDD7 pKa = 3.66LFHH10 pKa = 7.59PSTSPNPEE18 pKa = 3.77GEE20 pKa = 4.37GEE22 pKa = 4.17DD23 pKa = 3.38MSLEE27 pKa = 4.49TEE29 pKa = 4.17CHH31 pKa = 6.44APLQYY36 pKa = 10.85ISMLSFDD43 pKa = 5.25DD44 pKa = 4.26LLAAAGPPDD53 pKa = 3.92YY54 pKa = 11.09SPEE57 pKa = 4.18EE58 pKa = 4.06NQEE61 pKa = 4.0TPPIEE66 pKa = 4.37TIEE69 pKa = 4.24VGDD72 pKa = 3.65IMAEE76 pKa = 3.72LGIPIEE82 pKa = 4.72GPPTSPSDD90 pKa = 3.52SSSSLDD96 pKa = 3.3SVLFSGVDD104 pKa = 3.83LYY106 pKa = 11.61DD107 pKa = 3.97LDD109 pKa = 3.96YY110 pKa = 10.96TIVFSRR116 pKa = 11.84LRR118 pKa = 11.84EE119 pKa = 3.9FWQSHH124 pKa = 4.12GAYY127 pKa = 9.28LKK129 pKa = 9.53TVASLEE135 pKa = 4.04CMQNDD140 pKa = 3.53RR141 pKa = 11.84KK142 pKa = 10.15FQEE145 pKa = 4.95AYY147 pKa = 9.4CSLVRR152 pKa = 11.84MHH154 pKa = 6.99AVSEE158 pKa = 4.2DD159 pKa = 3.47AKK161 pKa = 10.72EE162 pKa = 4.03HH163 pKa = 6.31LNEE166 pKa = 4.65LLLDD170 pKa = 3.62EE171 pKa = 5.09TNYY174 pKa = 8.96QHH176 pKa = 7.46CEE178 pKa = 3.96PLNDD182 pKa = 3.65MLDD185 pKa = 3.71LGFRR189 pKa = 11.84WLNDD193 pKa = 3.33LKK195 pKa = 11.03GGIMEE200 pKa = 4.55WCMDD204 pKa = 3.75TALDD208 pKa = 3.88RR209 pKa = 11.84ASKK212 pKa = 10.65VMPLTDD218 pKa = 3.67YY219 pKa = 11.04QPQQ222 pKa = 3.17

Molecular weight: 25.03 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A1B1SLF0|A0A1B1SLF0_9ADEN ORF13 OS=Fowl aviadenovirus 4 OX=130663 PE=4 SV=1
MM1 pKa = 7.68SILISPNNNTGWGMRR16 pKa = 11.84RR17 pKa = 11.84RR18 pKa = 11.84SRR20 pKa = 11.84SSSMRR25 pKa = 11.84GVGMRR30 pKa = 11.84RR31 pKa = 11.84RR32 pKa = 11.84ARR34 pKa = 11.84PLTLRR39 pKa = 11.84SLLGLGTRR47 pKa = 11.84RR48 pKa = 11.84RR49 pKa = 11.84RR50 pKa = 11.84GSRR53 pKa = 11.84RR54 pKa = 11.84SRR56 pKa = 11.84PRR58 pKa = 11.84TTSRR62 pKa = 11.84LVVVRR67 pKa = 11.84TRR69 pKa = 11.84TSSMRR74 pKa = 11.84RR75 pKa = 11.84RR76 pKa = 11.84RR77 pKa = 3.5

Molecular weight: 9.04 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

41

1

42

13042

48

1251

310.5

34.95

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

7.476 ± 0.392

1.902 ± 0.237

5.321 ± 0.277

5.743 ± 0.419

4.263 ± 0.228

6.364 ± 0.344

2.408 ± 0.226

4.209 ± 0.222

3.665 ± 0.293

8.887 ± 0.315

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.645 ± 0.179

4.301 ± 0.43

6.878 ± 0.282

4.033 ± 0.246

7.0 ± 0.506

6.87 ± 0.325

6.533 ± 0.587

6.057 ± 0.302

1.372 ± 0.109

4.071 ± 0.271
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski