Filibacter tadaridae

Taxonomy: cellular organisms; Bacteria; Terrabacteria group; Firmicutes; Bacilli; Bacillales; Planococcaceae; Filibacter

Average proteome isoelectric point is 6.2

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 3039 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A3P5X1R8|A0A3P5X1R8_9BACL Transposase DDE domain protein OS=Filibacter tadaridae OX=2483811 GN=FILTAD_01195 PE=4 SV=1
MM1 pKa = 7.64RR2 pKa = 11.84NILIAYY8 pKa = 8.33TSMTGNTEE16 pKa = 3.82EE17 pKa = 4.18LAEE20 pKa = 4.05IAKK23 pKa = 10.11VVLTGRR29 pKa = 11.84GFDD32 pKa = 3.51VTVKK36 pKa = 10.07TFDD39 pKa = 3.81AEE41 pKa = 4.24AIAAKK46 pKa = 10.32EE47 pKa = 3.58FLAYY51 pKa = 10.35DD52 pKa = 4.73GILFGTYY59 pKa = 9.37TYY61 pKa = 11.44DD62 pKa = 4.99DD63 pKa = 4.05GNLPYY68 pKa = 10.05EE69 pKa = 4.18IEE71 pKa = 4.09EE72 pKa = 4.66TYY74 pKa = 11.54DD75 pKa = 3.93DD76 pKa = 5.28LDD78 pKa = 3.9TVSFTDD84 pKa = 3.24KK85 pKa = 10.74VVGVFGSGDD94 pKa = 2.99SCYY97 pKa = 11.06YY98 pKa = 9.24EE99 pKa = 4.57FCHH102 pKa = 6.19ATDD105 pKa = 4.09LMAEE109 pKa = 4.35KK110 pKa = 9.01FTEE113 pKa = 4.39VGAHH117 pKa = 4.81VVDD120 pKa = 5.12SIVKK124 pKa = 9.77VDD126 pKa = 5.44LDD128 pKa = 3.72AQQADD133 pKa = 4.2VDD135 pKa = 4.1RR136 pKa = 11.84MQAMVNMFCDD146 pKa = 4.98AIDD149 pKa = 3.42QRR151 pKa = 11.84LEE153 pKa = 3.99DD154 pKa = 3.51SCAA157 pKa = 3.2

Molecular weight: 17.39 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A3P5X1L9|A0A3P5X1L9_9BACL Uncharacterized protein OS=Filibacter tadaridae OX=2483811 GN=FILTAD_01828 PE=4 SV=1
MM1 pKa = 7.35KK2 pKa = 9.42RR3 pKa = 11.84TYY5 pKa = 10.34QPNKK9 pKa = 8.21RR10 pKa = 11.84KK11 pKa = 9.62RR12 pKa = 11.84SKK14 pKa = 9.83VHH16 pKa = 5.77GFRR19 pKa = 11.84ARR21 pKa = 11.84MSSKK25 pKa = 9.85SGRR28 pKa = 11.84RR29 pKa = 11.84VLAARR34 pKa = 11.84RR35 pKa = 11.84SKK37 pKa = 10.38GRR39 pKa = 11.84KK40 pKa = 8.51VLSAA44 pKa = 4.05

Molecular weight: 5.13 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

3039

0

3039

876302

29

1637

288.4

32.21

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

7.472 ± 0.048

0.622 ± 0.013

5.369 ± 0.037

7.45 ± 0.055

4.605 ± 0.036

7.123 ± 0.036

2.014 ± 0.021

7.752 ± 0.044

6.606 ± 0.039

9.616 ± 0.042

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.988 ± 0.024

4.038 ± 0.032

3.628 ± 0.027

3.307 ± 0.029

4.236 ± 0.036

5.958 ± 0.032

5.782 ± 0.034

7.235 ± 0.042

0.959 ± 0.016

3.238 ± 0.027
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski