Stanieria cyanosphaera (strain ATCC 29371 / PCC 7437)
Average proteome isoelectric point is 6.32
Get precalculated fractions of proteins
Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
All
Note: above files contain also dissociation constants (pKa)
Virtual 2D-PAGE plot for 4751 proteins (isoelectric point calculated using IPC2_protein)
Get csv file with sequences according to given criteria:
* You can choose from 21 different methods for calculating isoelectric point
Summary statistics related to proteome-wise predictions
Protein with the lowest isoelectric point:
>tr|K9Y011|K9Y011_STAC7 3-dehydrosphinganine reductase OS=Stanieria cyanosphaera (strain ATCC 29371 / PCC 7437) OX=111780 GN=Sta7437_4147 PE=3 SV=1
MM1 pKa = 7.3 SQAKK5 pKa = 9.36 KK6 pKa = 10.64 NNYY9 pKa = 8.48 SSRR12 pKa = 11.84 KK13 pKa = 9.59 NSVDD17 pKa = 3.46 QNSTKK22 pKa = 10.54 HH23 pKa = 6.41 LILIDD28 pKa = 4.24 SNLSNYY34 pKa = 10.49 SSFLTGEE41 pKa = 3.9 IPDD44 pKa = 3.96 AEE46 pKa = 4.45 VIEE49 pKa = 4.72 LEE51 pKa = 5.09 NGDD54 pKa = 4.11 LLKK57 pKa = 11.18 NIVSEE62 pKa = 4.95 AEE64 pKa = 3.9 IQTVDD69 pKa = 3.54 LTEE72 pKa = 5.66 DD73 pKa = 3.58 NLDD76 pKa = 4.21 DD77 pKa = 3.69 LTKK80 pKa = 10.34 ILSSSQNINNLHH92 pKa = 7.24 LITAFEE98 pKa = 4.11 SDD100 pKa = 3.51 EE101 pKa = 4.01 LQPYY105 pKa = 10.31 LKK107 pKa = 9.79 TLIEE111 pKa = 4.07 SDD113 pKa = 3.51 KK114 pKa = 11.49 AFTNDD119 pKa = 2.7 ATVYY123 pKa = 10.26 LYY125 pKa = 10.63 QYY127 pKa = 10.44 LPKK130 pKa = 9.78 TQTLNLQEE138 pKa = 4.42 RR139 pKa = 11.84 LSLGNSIPVQAEE151 pKa = 3.73 ANLVLNVDD159 pKa = 4.11 SATVTTDD166 pKa = 3.42 LDD168 pKa = 4.48 DD169 pKa = 4.4 YY170 pKa = 11.18 PPGATAIITGSNFDD184 pKa = 3.69 LGEE187 pKa = 4.28 TIEE190 pKa = 4.26 LQVLHH195 pKa = 6.93 TDD197 pKa = 4.38 NIPNTGGGHH206 pKa = 5.87 EE207 pKa = 4.27 PWQVTDD213 pKa = 5.15 GGAEE217 pKa = 4.01 DD218 pKa = 5.75 LDD220 pKa = 4.02 GKK222 pKa = 11.19 VDD224 pKa = 4.49 GKK226 pKa = 10.91 FQTTWYY232 pKa = 10.3 VNPDD236 pKa = 3.37 DD237 pKa = 4.58 SANSAFKK244 pKa = 9.81 LTATGLNSGEE254 pKa = 4.36 VATHH258 pKa = 6.96 HH259 pKa = 6.07 FTDD262 pKa = 4.2 SNPAVQFFYY271 pKa = 10.53 IPKK274 pKa = 9.74 KK275 pKa = 10.14 EE276 pKa = 3.78 ADD278 pKa = 3.16 ILTAIKK284 pKa = 10.36 AVATNTTSNFNSATDD299 pKa = 3.41 INTVISITVSTNNTIIYY316 pKa = 8.82 YY317 pKa = 8.03 DD318 pKa = 3.14 HH319 pKa = 7.51 WEE321 pKa = 4.15 NGYY324 pKa = 10.38 EE325 pKa = 4.34 SNLSNPTQSNTQIWGDD341 pKa = 3.61 NDD343 pKa = 3.76 PSNGIAPGYY352 pKa = 5.7 TTDD355 pKa = 3.26 VLKK358 pKa = 10.94 AGNIISLTNSVNPSTTSSVVDD379 pKa = 3.4 YY380 pKa = 11.14 DD381 pKa = 4.25 GEE383 pKa = 4.33 DD384 pKa = 3.31 KK385 pKa = 10.88 IGASKK390 pKa = 10.75 AIVISRR396 pKa = 11.84 PYY398 pKa = 10.09 WPTQNSSTGASGTLIAEE415 pKa = 4.4 SVNVYY420 pKa = 8.05 DD421 pKa = 3.67 TSKK424 pKa = 10.01 WGTSYY429 pKa = 10.91 KK430 pKa = 10.6 VPVGEE435 pKa = 4.44 NFSSSVNFEE444 pKa = 3.77 YY445 pKa = 10.15 TALFVTAAKK454 pKa = 10.81 NNTTLTITGADD465 pKa = 3.36 TTGDD469 pKa = 3.41 NVADD473 pKa = 3.98 GTITTTINEE482 pKa = 4.28 GQSYY486 pKa = 9.22 FLNGGVLVGTQVTGSNPIQAHH507 pKa = 7.06 LLTGDD512 pKa = 3.17 IGSTYY517 pKa = 9.36 ATRR520 pKa = 11.84 AYY522 pKa = 9.68 TLVPTNQWGNSYY534 pKa = 7.67 YY535 pKa = 10.2 TPVGTVVSGKK545 pKa = 8.2 PTDD548 pKa = 3.41 VYY550 pKa = 10.86 LYY552 pKa = 10.86 NPATSGSITVKK563 pKa = 10.7 AQTQQGTTDD572 pKa = 3.27 VSVPAGTSVRR582 pKa = 11.84 HH583 pKa = 6.03 RR584 pKa = 11.84 LTTNSGAYY592 pKa = 10.06 FYY594 pKa = 7.62 TTNINDD600 pKa = 3.66 TFFATTAFDD609 pKa = 4.32 SEE611 pKa = 4.49 NSAHH615 pKa = 7.13 DD616 pKa = 3.56 WGFSLIPEE624 pKa = 4.39 EE625 pKa = 4.23 NLTPIIQVGWAPGNGAKK642 pKa = 9.67 NHH644 pKa = 6.32 NGNPLWVMATAPTTIYY660 pKa = 10.81 VDD662 pKa = 3.53 YY663 pKa = 11.09 DD664 pKa = 3.74 GDD666 pKa = 4.18 GVALNTDD673 pKa = 3.3 INGTKK678 pKa = 10.23 YY679 pKa = 10.47 DD680 pKa = 3.37 ASFNLGTLQTIQITDD695 pKa = 3.48 TKK697 pKa = 11.43 NNDD700 pKa = 3.01 FDD702 pKa = 3.81 QSGIRR707 pKa = 11.84 VYY709 pKa = 10.41 TVDD712 pKa = 3.3 GTNLAGAWGQDD723 pKa = 3.09 ANADD727 pKa = 3.75 TGGTSLDD734 pKa = 4.03 LGTEE738 pKa = 4.15 ILPLPIAYY746 pKa = 9.17 SWKK749 pKa = 10.29 EE750 pKa = 3.52 FALVNDD756 pKa = 3.94 VNNDD760 pKa = 3.29 GNVDD764 pKa = 3.63 PGDD767 pKa = 3.88 TIEE770 pKa = 3.98 FTINIKK776 pKa = 10.6 NDD778 pKa = 3.16 GVVVLGNVNVSDD790 pKa = 5.41 IIPKK794 pKa = 7.67 GTTYY798 pKa = 10.46 ISSSTKK804 pKa = 9.66 IDD806 pKa = 3.31 GTNIGDD812 pKa = 3.94 DD813 pKa = 3.55 TSGTTFPFDD822 pKa = 4.94 DD823 pKa = 5.06 DD824 pKa = 5.56 NIFNNIDD831 pKa = 3.52 DD832 pKa = 4.66 GLNIGNVPVGGSASVTFRR850 pKa = 11.84 MLVNNPYY857 pKa = 10.47 DD858 pKa = 3.83 GNLAGITNSAAVDD871 pKa = 3.47 SDD873 pKa = 4.04 EE874 pKa = 4.45 NSLTIAVNAPVDD886 pKa = 3.45 IPTQTKK892 pKa = 7.97 TLYY895 pKa = 10.68 LSGVSDD901 pKa = 4.88 LDD903 pKa = 4.0 RR904 pKa = 11.84 INPVTTNDD912 pKa = 3.42 TTTSTSSNLGITSVASDD929 pKa = 3.37 NFSTGNYY936 pKa = 8.64 TGGTGWKK943 pKa = 9.4 AAWSEE948 pKa = 4.18 SSDD951 pKa = 4.08 DD952 pKa = 3.66 NTATGGQIRR961 pKa = 11.84 VNTQRR966 pKa = 11.84 LQFLQAGTTDD976 pKa = 4.71 AIQRR980 pKa = 11.84 SVNLSGHH987 pKa = 5.72 SKK989 pKa = 9.27 ATLSYY994 pKa = 10.51 DD995 pKa = 2.98 WQTSSLEE1002 pKa = 3.76 EE1003 pKa = 4.39 SIQVLISNSSTGTFTVLGTYY1023 pKa = 9.26 TGTTSNSATFDD1034 pKa = 2.9 ISSYY1038 pKa = 10.45 ISNDD1042 pKa = 3.13 TTIKK1046 pKa = 9.96 IQNNSGNWNEE1056 pKa = 4.61 ANDD1059 pKa = 3.39 IAYY1062 pKa = 10.08 FDD1064 pKa = 4.2 NFNINAGIISTTFNQSISMKK1084 pKa = 10.22 SDD1086 pKa = 3.08 FEE1088 pKa = 4.37 MPSGKK1093 pKa = 9.33 PVTVSAYY1100 pKa = 9.53 INASTGTPSISSNIAATVTYY1120 pKa = 10.75 DD1121 pKa = 4.43 SGTLLNLSNPTSVVSQGGGVYY1142 pKa = 10.52 LVTWTGTLNNNVTIPTGQDD1161 pKa = 2.66 VSLNITNNQSNLNFTVLSDD1180 pKa = 3.69 SNTYY1184 pKa = 9.31 PSKK1187 pKa = 10.63 IDD1189 pKa = 3.37 LATRR1193 pKa = 11.84 SVIDD1197 pKa = 3.26 ITSIGIYY1204 pKa = 10.25 DD1205 pKa = 3.53 NSYY1208 pKa = 11.59 ANGGGNLVNAASNGNTVYY1226 pKa = 10.86 LRR1228 pKa = 11.84 VQVKK1232 pKa = 10.62 DD1233 pKa = 3.36 PFGDD1237 pKa = 3.69 YY1238 pKa = 10.62 DD1239 pKa = 3.62 ITGLAINITDD1249 pKa = 4.02 PNNNNLSTINLTSTSDD1265 pKa = 3.03 VDD1267 pKa = 3.6 TTTDD1271 pKa = 2.74 GKK1273 pKa = 10.67 RR1274 pKa = 11.84 IYY1276 pKa = 9.77 EE1277 pKa = 4.35 YY1278 pKa = 11.17 AWTPPSTIGNYY1289 pKa = 7.42 TLNVTAKK1296 pKa = 9.52 EE1297 pKa = 4.56 GYY1299 pKa = 9.32 EE1300 pKa = 3.97 NTVTDD1305 pKa = 3.94 TASTTLNLNNGTVPNVIIGDD1325 pKa = 3.72 ATATEE1330 pKa = 4.48 GNLLVFDD1337 pKa = 4.74 VSLSTASTSDD1347 pKa = 3.47 IILDD1351 pKa = 4.03 LATTDD1356 pKa = 3.53 GTATGISDD1364 pKa = 3.62 YY1365 pKa = 10.52 EE1366 pKa = 4.19 INGFEE1371 pKa = 4.27 YY1372 pKa = 9.98 STDD1375 pKa = 3.3 GGTNWIAAGGTNGSRR1390 pKa = 11.84 VTIPAGNTNIKK1401 pKa = 9.94 VRR1403 pKa = 11.84 INSVSDD1409 pKa = 3.4 STDD1412 pKa = 3.16 EE1413 pKa = 4.25 PNEE1416 pKa = 4.01 TFILGVKK1423 pKa = 9.77 SVVSGSVGNTSDD1435 pKa = 3.64 TGTGTITDD1443 pKa = 4.75 DD1444 pKa = 4.83 DD1445 pKa = 4.35 PTPSISISDD1454 pKa = 3.64 VSLTEE1459 pKa = 4.48 GNSNTKK1465 pKa = 9.77 QFNFTVSLSNASSQTVSVNYY1485 pKa = 8.59 ATANGTATIANSDD1498 pKa = 3.81 YY1499 pKa = 10.88 TSATGTVTFAPGEE1512 pKa = 4.31 TTKK1515 pKa = 10.51 TLTVNVTGDD1524 pKa = 3.45 TTVEE1528 pKa = 3.83 PNEE1531 pKa = 4.16 TFFVNLSSATNATIIDD1547 pKa = 3.84 SQGIGTILNDD1557 pKa = 4.44 DD1558 pKa = 4.79 NIALLAINDD1567 pKa = 3.63 VSVTEE1572 pKa = 4.66 GNSGTKK1578 pKa = 9.8 ILTFTVTRR1586 pKa = 11.84 SGLTTSAVTVNYY1598 pKa = 7.98 ATANNTATTANNDD1611 pKa = 3.63 YY1612 pKa = 10.8 VSTSGTLSFASGEE1625 pKa = 4.21 TSKK1628 pKa = 10.09 TISVTINGDD1637 pKa = 3.64 TPPEE1641 pKa = 3.91 ADD1643 pKa = 2.93 EE1644 pKa = 4.45 TFFVNLSNATNATIIDD1660 pKa = 3.96 SQGVGTILNDD1670 pKa = 3.85 DD1671 pKa = 3.75 ASGTITGRR1679 pKa = 11.84 VLADD1683 pKa = 3.44 TNNDD1687 pKa = 3.34 NTGDD1691 pKa = 3.83 TPLSGVTIEE1700 pKa = 5.28 LLDD1703 pKa = 3.74 SSGNAIDD1710 pKa = 4.86 SDD1712 pKa = 4.51 PNTSGVQPTTTTTNSNGDD1730 pKa = 3.5 YY1731 pKa = 9.71 TFSNVTPGSYY1741 pKa = 9.77 RR1742 pKa = 11.84 IKK1744 pKa = 9.85 EE1745 pKa = 4.23 TDD1747 pKa = 3.03 PTGYY1751 pKa = 10.9 GSVSDD1756 pKa = 5.1 GDD1758 pKa = 4.05 TTDD1761 pKa = 4.88 GNDD1764 pKa = 3.51 DD1765 pKa = 3.64 TPANTNTNDD1774 pKa = 3.14 NLIPVTITANEE1785 pKa = 3.93 VDD1787 pKa = 3.56 SGNNFVDD1794 pKa = 4.01 EE1795 pKa = 4.11 QLGTISGTVLKK1806 pKa = 9.5 DD1807 pKa = 3.39 TNNDD1811 pKa = 4.21 DD1812 pKa = 4.76 IGDD1815 pKa = 4.02 TPLSGVTIEE1824 pKa = 5.43 LLDD1827 pKa = 4.07 SNGNPIDD1834 pKa = 4.23 SDD1836 pKa = 4.16 PNTTGIQPTTTTTNSNGNYY1855 pKa = 9.82 SFTNVAPGNYY1865 pKa = 8.59 KK1866 pKa = 10.19 VAEE1869 pKa = 4.18 TDD1871 pKa = 3.27 PAGYY1875 pKa = 10.45 SSVKK1879 pKa = 10.82 DD1880 pKa = 3.4 SDD1882 pKa = 4.2 NNGNNNLIDD1891 pKa = 3.61 VTLATGGSSTGNDD1904 pKa = 3.41 FVDD1907 pKa = 3.72 EE1908 pKa = 4.38 QYY1910 pKa = 11.78 GSISGNVSADD1920 pKa = 3.05 TDD1922 pKa = 3.83 NNNTGDD1928 pKa = 3.69 VNLNNVTLEE1937 pKa = 4.26 LLDD1940 pKa = 3.85 SSGNSIDD1947 pKa = 4.79 SDD1949 pKa = 4.31 LNTAGIQATTTTTNASGNYY1968 pKa = 7.89 TFSNLAPGTYY1978 pKa = 7.94 QVRR1981 pKa = 11.84 QTNLTGYY1988 pKa = 10.8 GDD1990 pKa = 3.67 VSDD1993 pKa = 4.5 VDD1995 pKa = 3.74 GGNPNLITNINVTAGGAVTGRR2016 pKa = 11.84 NFIDD2020 pKa = 3.57 EE2021 pKa = 4.47 QYY2023 pKa = 11.51 GSISGNVSADD2033 pKa = 3.05 TDD2035 pKa = 3.83 NNNTGDD2041 pKa = 3.69 VNLNNVTLEE2050 pKa = 4.26 LLDD2053 pKa = 3.85 SSGNSIDD2060 pKa = 4.79 SDD2062 pKa = 4.31 LNTAGIQATTTTTNASGNYY2081 pKa = 7.89 TFSNLAPGTYY2091 pKa = 7.94 QVRR2094 pKa = 11.84 QTNLTGYY2101 pKa = 10.8 GDD2103 pKa = 3.67 VSDD2106 pKa = 4.5 VDD2108 pKa = 3.74 GGNPNLITNINVTAGGAVTGRR2129 pKa = 11.84 NFIDD2133 pKa = 3.57 EE2134 pKa = 4.47 QYY2136 pKa = 11.51 GSISGNVSADD2146 pKa = 3.05 TDD2148 pKa = 3.83 NNNTGDD2154 pKa = 3.69 VNLNNVTLEE2163 pKa = 4.26 LLDD2166 pKa = 3.85 SSGNSIDD2173 pKa = 4.79 SDD2175 pKa = 4.31 LNTAGIQATTTTTNASGNYY2194 pKa = 7.89 TFSNLAPGTYY2204 pKa = 7.94 QVRR2207 pKa = 11.84 QTNLTGYY2214 pKa = 10.8 GDD2216 pKa = 3.67 VSDD2219 pKa = 4.5 VDD2221 pKa = 3.74 GGNPNLITNINVTAGGAVTGRR2242 pKa = 11.84 NFIDD2246 pKa = 3.57 EE2247 pKa = 4.47 QYY2249 pKa = 11.51 GSISGNVSADD2259 pKa = 3.05 TDD2261 pKa = 3.83 NNNTGDD2267 pKa = 3.69 VNLNNVTLEE2276 pKa = 4.26 LLDD2279 pKa = 3.85 SSGNSIDD2286 pKa = 4.06 SDD2288 pKa = 4.5 SNTSGIQATTTTTDD2302 pKa = 2.78 SNGNYY2307 pKa = 8.4 TFSNVTPGSYY2317 pKa = 8.55 QVKK2320 pKa = 7.95 QTDD2323 pKa = 3.37 LSGYY2327 pKa = 9.99 ISVSDD2332 pKa = 4.05 GDD2334 pKa = 4.08 STNAGDD2340 pKa = 4.71 DD2341 pKa = 3.8 TPTNTNTNDD2350 pKa = 3.08 NLIPVTINANEE2361 pKa = 4.05 TDD2363 pKa = 3.65 SGNDD2367 pKa = 3.8 FIDD2370 pKa = 3.8 EE2371 pKa = 4.31 PLRR2374 pKa = 11.84 SISGTVLADD2383 pKa = 3.55 TNNDD2387 pKa = 3.26 NTGDD2391 pKa = 3.94 SPLSGVTIEE2400 pKa = 5.28 LLDD2403 pKa = 3.7 SSGNSIDD2410 pKa = 4.56 SNSTLAGVQPTTTTTASDD2428 pKa = 3.53 GSYY2431 pKa = 10.88 SFANLAPGNYY2441 pKa = 7.94 QVKK2444 pKa = 7.96 QTNLSGYY2451 pKa = 10.23 LDD2453 pKa = 3.53 VSDD2456 pKa = 4.89 IDD2458 pKa = 4.41 GGNLNNISVNLNAGNSTGNNFVDD2481 pKa = 4.22 EE2482 pKa = 4.28 QTGTISGQVLADD2494 pKa = 3.78 AADD2497 pKa = 4.51 DD2498 pKa = 5.36 DD2499 pKa = 5.39 NIGDD2503 pKa = 3.77 NSLSGVTLEE2512 pKa = 5.36 LLDD2515 pKa = 4.36 NNGDD2519 pKa = 3.83 PVIDD2523 pKa = 4.09 GNGNPITTTTDD2534 pKa = 2.77 SNGIYY2539 pKa = 10.02 SFTGVAPGTYY2549 pKa = 7.92 QVRR2552 pKa = 11.84 QTNLAGYY2559 pKa = 10.49 GDD2561 pKa = 4.34 VNEE2564 pKa = 5.24 LDD2566 pKa = 4.72 SIDD2569 pKa = 5.63 DD2570 pKa = 3.98 SVLDD2574 pKa = 4.11 TDD2576 pKa = 5.7 LEE2578 pKa = 4.49 TANVDD2583 pKa = 3.23 NDD2585 pKa = 3.42 NLLTVDD2591 pKa = 4.17 LTAGEE2596 pKa = 4.69 SDD2598 pKa = 3.52 TGNDD2602 pKa = 4.14 FIDD2605 pKa = 3.45 KK2606 pKa = 10.47 LFLKK2610 pKa = 9.88 GTDD2613 pKa = 3.16 SAEE2616 pKa = 4.02 NFTASPGNDD2625 pKa = 3.02 VIIGYY2630 pKa = 9.61 KK2631 pKa = 10.7 GEE2633 pKa = 4.11 DD2634 pKa = 3.6 TLTGGTGNDD2643 pKa = 3.07 TYY2645 pKa = 11.3 FLNEE2649 pKa = 4.03 TSDD2652 pKa = 3.98 GLDD2655 pKa = 3.59 SITDD2659 pKa = 3.84 FTPGEE2664 pKa = 4.13 DD2665 pKa = 5.25 KK2666 pKa = 10.76 IDD2668 pKa = 3.78 LSQILVDD2675 pKa = 3.66 EE2676 pKa = 4.54 VTNYY2680 pKa = 7.08 TTGDD2684 pKa = 4.04 PFTQGYY2690 pKa = 9.39 VEE2692 pKa = 4.71 LLGFNHH2698 pKa = 6.46 PTYY2701 pKa = 10.46 GASTIVQIDD2710 pKa = 3.9 FDD2712 pKa = 5.56 AGDD2715 pKa = 3.77 EE2716 pKa = 4.39 STVGDD2721 pKa = 5.24 LYY2723 pKa = 11.33 HH2724 pKa = 7.07 KK2725 pKa = 10.53 DD2726 pKa = 3.03 IVFLRR2731 pKa = 11.84 GVDD2734 pKa = 3.62 VANLQTSRR2742 pKa = 11.84 DD2743 pKa = 4.1 FIII2746 pKa = 4.89
Molecular weight: 287.7 kDa
Isoelectric point according different methods:
IPC2.protein.svr19 3.701
IPC2_protein 3.541
IPC_protein 3.617
Toseland 3.376
ProMoST 3.795
Dawson 3.63
Bjellqvist 3.783
Wikipedia 3.579
Rodwell 3.439
Grimsley 3.274
Solomon 3.63
Lehninger 3.579
Nozaki 3.732
DTASelect 4.037
Thurlkill 3.427
EMBOSS 3.592
Sillero 3.745
Patrickios 1.354
IPC_peptide 3.617
IPC2_peptide 3.719
IPC2.peptide.svr19 3.699
Protein with the highest isoelectric point:
>tr|K9XU92|K9XU92_STAC7 Uncharacterized protein OS=Stanieria cyanosphaera (strain ATCC 29371 / PCC 7437) OX=111780 GN=Sta7437_2095 PE=4 SV=1
MM1 pKa = 6.61 TQRR4 pKa = 11.84 TLGGTNRR11 pKa = 11.84 KK12 pKa = 7.61 QKK14 pKa = 8.99 RR15 pKa = 11.84 TSGFRR20 pKa = 11.84 ARR22 pKa = 11.84 MRR24 pKa = 11.84 TSNGRR29 pKa = 11.84 KK30 pKa = 8.64 VVQARR35 pKa = 11.84 RR36 pKa = 11.84 KK37 pKa = 9.08 RR38 pKa = 11.84 GRR40 pKa = 11.84 HH41 pKa = 5.0 RR42 pKa = 11.84 LTVV45 pKa = 3.17
Molecular weight: 5.3 kDa
Isoelectric point according different methods:
IPC2.protein.svr19 9.526
IPC2_protein 11.286
IPC_protein 12.881
Toseland 13.042
ProMoST 13.539
Dawson 13.042
Bjellqvist 13.042
Wikipedia 13.525
Rodwell 12.676
Grimsley 13.086
Solomon 13.539
Lehninger 13.437
Nozaki 13.042
DTASelect 13.042
Thurlkill 13.042
EMBOSS 13.539
Sillero 13.042
Patrickios 12.398
IPC_peptide 13.539
IPC2_peptide 12.53
IPC2.peptide.svr19 9.215
Peptides (in silico digests for buttom-up proteomics)
Below you can find
in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.
Try ESI
ChTry ESI
ArgC ESI
LysN ESI
TryLysC ESI
Try MALDI
ChTry MALDI
ArgC MALDI
LysN MALDI
TryLysC MALDI
Try LTQ
ChTry LTQ
ArgC LTQ
LysN LTQ
TryLysC LTQ
Try MSlow
ChTry MSlow
ArgC MSlow
LysN MSlow
TryLysC MSlow
Try MShigh
ChTry MShigh
ArgC MShigh
LysN MShigh
TryLysC MShigh
General Statistics
Number of major isoforms
Number of additional isoforms
Number of all proteins
Number of amino acids
Min. Seq. Length
Max. Seq. Length
Avg. Seq. Length
Avg. Mol. Weight
4751
0
4751
1501324
29
4229
316.0
35.45
Amino acid frequency
Ala
Cys
Asp
Glu
Phe
Gly
His
Ile
Lys
Leu
7.511 ± 0.039
1.005 ± 0.011
4.666 ± 0.03
6.465 ± 0.036
4.034 ± 0.028
6.204 ± 0.037
1.748 ± 0.019
7.508 ± 0.029
5.309 ± 0.037
11.289 ± 0.046
Met
Asn
Gln
Pro
Arg
Ser
Thr
Val
Trp
Tyr
1.7 ± 0.014
4.965 ± 0.04
4.25 ± 0.026
5.795 ± 0.036
4.621 ± 0.029
6.436 ± 0.028
5.639 ± 0.03
6.162 ± 0.028
1.46 ± 0.016
3.236 ± 0.023
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level
Most of the basic statistics you can see at this page can be downloaded from this CSV file
For dipeptide frequency statistics click here