Lymphocytic choriomeningitis virus (strain Armstrong) (LCMV)
Average proteome isoelectric point is 7.28
Get precalculated fractions of proteins
Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
All
Note: above files contain also dissociation constants (pKa)
Virtual 2D-PAGE plot for 4 proteins (isoelectric point calculated using IPC2_protein)
Get csv file with sequences according to given criteria:
* You can choose from 21 different methods for calculating isoelectric point
Summary statistics related to proteome-wise predictions
Protein with the lowest isoelectric point:
>sp|P18541|Z_LYCVA RING finger protein Z OS=Lymphocytic choriomeningitis virus (strain Armstrong) OX=11624 GN=Z PE=1 SV=3
MM1 pKa = 7.98 DD2 pKa = 5.9 EE3 pKa = 4.94 IISEE7 pKa = 4.28 LRR9 pKa = 11.84 EE10 pKa = 3.72 LCLNYY15 pKa = 9.76 IEE17 pKa = 4.26 QDD19 pKa = 3.23 EE20 pKa = 4.3 RR21 pKa = 11.84 LSRR24 pKa = 11.84 QKK26 pKa = 11.3 LNFLGQRR33 pKa = 11.84 EE34 pKa = 4.06 PRR36 pKa = 11.84 MVLIEE41 pKa = 3.88 GLKK44 pKa = 10.52 LLSRR48 pKa = 11.84 CIEE51 pKa = 3.87 IDD53 pKa = 3.49 SADD56 pKa = 4.14 KK57 pKa = 11.06 SGCTHH62 pKa = 5.76 NHH64 pKa = 6.56 DD65 pKa = 4.51 DD66 pKa = 4.65 KK67 pKa = 11.53 SVEE70 pKa = 4.31 TILVEE75 pKa = 4.56 SGIVCPGLPLIIPDD89 pKa = 4.34 GYY91 pKa = 11.56 KK92 pKa = 10.81 LIDD95 pKa = 3.54 NSLILLEE102 pKa = 4.26 CFVRR106 pKa = 11.84 SSPASFEE113 pKa = 4.24 KK114 pKa = 10.84 KK115 pKa = 10.29 FIEE118 pKa = 4.49 DD119 pKa = 3.91 TNKK122 pKa = 10.09 LACIRR127 pKa = 11.84 EE128 pKa = 4.22 DD129 pKa = 3.48 LAVAGVTLVPIVDD142 pKa = 3.98 GRR144 pKa = 11.84 CDD146 pKa = 3.74 YY147 pKa = 11.55 DD148 pKa = 3.75 NSFMPEE154 pKa = 3.14 WANFKK159 pKa = 10.74 FRR161 pKa = 11.84 DD162 pKa = 3.8 LLFKK166 pKa = 10.89 LLEE169 pKa = 3.98 YY170 pKa = 10.91 SNQNEE175 pKa = 4.37 KK176 pKa = 10.62 VFEE179 pKa = 3.98 EE180 pKa = 4.23 SEE182 pKa = 4.3 YY183 pKa = 10.92 FRR185 pKa = 11.84 LCEE188 pKa = 4.07 SLKK191 pKa = 8.23 TTIDD195 pKa = 3.17 KK196 pKa = 10.8 RR197 pKa = 11.84 SGMDD201 pKa = 2.92 SMKK204 pKa = 10.08 ILKK207 pKa = 9.66 DD208 pKa = 3.23 ARR210 pKa = 11.84 STHH213 pKa = 5.91 NDD215 pKa = 2.86 EE216 pKa = 4.44 IMRR219 pKa = 11.84 MCHH222 pKa = 6.31 EE223 pKa = 5.31 GINPNMSCDD232 pKa = 3.38 DD233 pKa = 3.57 VVFGINSLFSRR244 pKa = 11.84 FRR246 pKa = 11.84 RR247 pKa = 11.84 DD248 pKa = 3.25 LEE250 pKa = 4.2 SGKK253 pKa = 10.54 LKK255 pKa = 10.99 RR256 pKa = 11.84 NFQKK260 pKa = 10.73 VNPEE264 pKa = 3.72 GLIKK268 pKa = 10.39 EE269 pKa = 4.11 FSEE272 pKa = 5.19 LYY274 pKa = 10.63 EE275 pKa = 4.23 NLADD279 pKa = 4.63 SDD281 pKa = 5.3 DD282 pKa = 3.78 ILTLSRR288 pKa = 11.84 EE289 pKa = 4.27 AVEE292 pKa = 4.46 SCPLMRR298 pKa = 11.84 FITAEE303 pKa = 3.95 THH305 pKa = 3.91 GHH307 pKa = 5.17 EE308 pKa = 4.67 RR309 pKa = 11.84 GSEE312 pKa = 3.86 TSTEE316 pKa = 4.09 YY317 pKa = 10.83 EE318 pKa = 4.15 RR319 pKa = 11.84 LLSMLNKK326 pKa = 9.76 VKK328 pKa = 10.52 SLKK331 pKa = 10.47 LLNTRR336 pKa = 11.84 RR337 pKa = 11.84 RR338 pKa = 11.84 QLLNLDD344 pKa = 3.99 VLCLSSLIKK353 pKa = 10.13 QSKK356 pKa = 9.9 FKK358 pKa = 10.85 GLKK361 pKa = 9.06 NDD363 pKa = 3.58 KK364 pKa = 10.14 HH365 pKa = 5.99 WVGCCYY371 pKa = 10.81 SSVNDD376 pKa = 3.87 RR377 pKa = 11.84 LVSFHH382 pKa = 5.39 STKK385 pKa = 10.98 EE386 pKa = 3.61 EE387 pKa = 4.28 FIRR390 pKa = 11.84 LLRR393 pKa = 11.84 NRR395 pKa = 11.84 KK396 pKa = 8.44 KK397 pKa = 10.55 SKK399 pKa = 9.93 VFRR402 pKa = 11.84 KK403 pKa = 10.24 VSFEE407 pKa = 3.88 EE408 pKa = 4.07 LFRR411 pKa = 11.84 ASISEE416 pKa = 4.67 FIAKK420 pKa = 8.93 IQKK423 pKa = 9.64 CLLVVGLSFEE433 pKa = 4.55 HH434 pKa = 6.56 YY435 pKa = 10.2 GLSEE439 pKa = 3.98 HH440 pKa = 7.17 LEE442 pKa = 4.26 QEE444 pKa = 4.0 CHH446 pKa = 6.17 IPFTEE451 pKa = 4.61 FEE453 pKa = 4.16 NFMKK457 pKa = 10.47 IGAHH461 pKa = 6.66 PIMYY465 pKa = 7.3 YY466 pKa = 10.13 TKK468 pKa = 10.24 FEE470 pKa = 5.13 DD471 pKa = 4.25 YY472 pKa = 10.84 NFQPSTEE479 pKa = 3.97 QLKK482 pKa = 10.74 NIQSLRR488 pKa = 11.84 RR489 pKa = 11.84 LSSVCLALTNSMKK502 pKa = 9.91 TSSVARR508 pKa = 11.84 LRR510 pKa = 11.84 QNQIGSVRR518 pKa = 11.84 YY519 pKa = 8.62 QVVEE523 pKa = 4.27 CKK525 pKa = 10.11 EE526 pKa = 4.19 VFCQVIKK533 pKa = 10.82 LDD535 pKa = 3.62 SEE537 pKa = 4.84 EE538 pKa = 4.07 YY539 pKa = 10.13 HH540 pKa = 7.09 LLYY543 pKa = 10.69 QKK545 pKa = 9.53 TGEE548 pKa = 4.09 SSRR551 pKa = 11.84 CYY553 pKa = 10.35 SIQGPDD559 pKa = 2.74 GHH561 pKa = 7.16 LISFYY566 pKa = 11.1 ADD568 pKa = 3.09 PKK570 pKa = 10.95 RR571 pKa = 11.84 FFLPIFSDD579 pKa = 3.58 EE580 pKa = 4.08 VLYY583 pKa = 11.58 NMIDD587 pKa = 3.96 IMISWIRR594 pKa = 11.84 SCPDD598 pKa = 3.41 LKK600 pKa = 11.25 DD601 pKa = 3.61 CLTDD605 pKa = 3.21 IEE607 pKa = 4.65 VALRR611 pKa = 11.84 TLLLLMLTNPTKK623 pKa = 10.67 RR624 pKa = 11.84 NQKK627 pKa = 8.26 QVQSVRR633 pKa = 11.84 YY634 pKa = 8.45 LVMAIVSDD642 pKa = 4.77 FSSTSLMDD650 pKa = 3.9 KK651 pKa = 10.52 LRR653 pKa = 11.84 EE654 pKa = 3.98 DD655 pKa = 5.51 LITPAEE661 pKa = 4.12 KK662 pKa = 10.37 VVYY665 pKa = 10.04 KK666 pKa = 10.48 LLRR669 pKa = 11.84 FLIKK673 pKa = 9.85 TIFGTGEE680 pKa = 4.06 KK681 pKa = 10.34 VLLSAKK687 pKa = 10.0 FKK689 pKa = 10.95 FMLNVSYY696 pKa = 10.64 LCHH699 pKa = 7.56 LITKK703 pKa = 7.36 EE704 pKa = 4.24 TPDD707 pKa = 4.11 RR708 pKa = 11.84 LTDD711 pKa = 3.57 QIKK714 pKa = 10.46 CFEE717 pKa = 4.54 KK718 pKa = 10.56 FFEE721 pKa = 4.82 PKK723 pKa = 9.78 SQFGFFVNPKK733 pKa = 9.47 EE734 pKa = 4.4 AITPEE739 pKa = 4.23 EE740 pKa = 3.82 EE741 pKa = 4.31 CVFYY745 pKa = 10.95 EE746 pKa = 3.82 QMKK749 pKa = 10.39 RR750 pKa = 11.84 FTSKK754 pKa = 10.8 EE755 pKa = 3.43 IDD757 pKa = 3.97 CQHH760 pKa = 5.74 TTPGVNLEE768 pKa = 4.22 AFSLMVSSFNNGTLIFKK785 pKa = 10.28 GEE787 pKa = 4.02 KK788 pKa = 9.65 KK789 pKa = 10.68 LNSLDD794 pKa = 3.43 PMTNSGCATALDD806 pKa = 4.03 LASNKK811 pKa = 9.96 SVVVNKK817 pKa = 10.03 HH818 pKa = 5.46 LNGEE822 pKa = 4.18 RR823 pKa = 11.84 LLEE826 pKa = 3.89 YY827 pKa = 10.59 DD828 pKa = 3.79 FNKK831 pKa = 10.64 LLVSAVSQITEE842 pKa = 4.0 SFVRR846 pKa = 11.84 KK847 pKa = 9.29 QKK849 pKa = 11.04 YY850 pKa = 9.3 KK851 pKa = 10.63 LSHH854 pKa = 6.29 SDD856 pKa = 3.41 YY857 pKa = 9.65 EE858 pKa = 4.55 YY859 pKa = 11.15 KK860 pKa = 10.58 VSKK863 pKa = 10.31 LVSRR867 pKa = 11.84 LVIGSKK873 pKa = 10.86 GEE875 pKa = 3.82 EE876 pKa = 3.97 TGRR879 pKa = 11.84 SEE881 pKa = 5.5 DD882 pKa = 3.96 NLAEE886 pKa = 3.88 ICFDD890 pKa = 3.83 GEE892 pKa = 4.3 EE893 pKa = 4.11 EE894 pKa = 4.28 TSFFKK899 pKa = 11.03 SLEE902 pKa = 4.24 EE903 pKa = 4.28 KK904 pKa = 11.1 VNTTIARR911 pKa = 11.84 YY912 pKa = 9.31 RR913 pKa = 11.84 RR914 pKa = 11.84 GRR916 pKa = 11.84 RR917 pKa = 11.84 ANDD920 pKa = 3.17 KK921 pKa = 11.31 GDD923 pKa = 3.7 GEE925 pKa = 4.65 KK926 pKa = 9.85 LTNTKK931 pKa = 10.04 GLHH934 pKa = 5.71 HH935 pKa = 6.99 LQLILTGKK943 pKa = 8.47 MAHH946 pKa = 5.84 LRR948 pKa = 11.84 KK949 pKa = 10.13 VILSEE954 pKa = 3.91 ISFHH958 pKa = 6.73 LVEE961 pKa = 5.78 DD962 pKa = 4.99 FDD964 pKa = 5.14 PSCLTNDD971 pKa = 3.45 DD972 pKa = 3.82 MKK974 pKa = 10.8 FICEE978 pKa = 3.85 AVEE981 pKa = 4.51 GSTEE985 pKa = 4.07 LSPLYY990 pKa = 8.72 FTSVIKK996 pKa = 10.03 DD997 pKa = 3.23 QCGLDD1002 pKa = 3.49 EE1003 pKa = 4.2 MAKK1006 pKa = 9.53 NLCRR1010 pKa = 11.84 KK1011 pKa = 8.87 FFSEE1015 pKa = 4.71 NDD1017 pKa = 3.04 WFSCMKK1023 pKa = 10.18 MILLQMNANAYY1034 pKa = 8.22 SGKK1037 pKa = 8.8 YY1038 pKa = 8.35 RR1039 pKa = 11.84 HH1040 pKa = 6.02 MQRR1043 pKa = 11.84 QGLNFKK1049 pKa = 10.51 FDD1051 pKa = 3.61 WDD1053 pKa = 3.69 KK1054 pKa = 11.77 LEE1056 pKa = 3.93 EE1057 pKa = 4.07 DD1058 pKa = 3.6 VRR1060 pKa = 11.84 ISEE1063 pKa = 4.4 RR1064 pKa = 11.84 EE1065 pKa = 4.11 SNSEE1069 pKa = 4.16 SLSKK1073 pKa = 10.79 ALSLTKK1079 pKa = 10.59 CMSAALKK1086 pKa = 10.02 NLCFYY1091 pKa = 10.98 SEE1093 pKa = 4.62 EE1094 pKa = 4.57 SPTSYY1099 pKa = 10.67 TSVGPDD1105 pKa = 2.79 SGRR1108 pKa = 11.84 LKK1110 pKa = 10.58 FALSYY1115 pKa = 10.6 KK1116 pKa = 9.65 EE1117 pKa = 3.76 QVGGNRR1123 pKa = 11.84 EE1124 pKa = 4.21 LYY1126 pKa = 10.37 IGDD1129 pKa = 4.8 LRR1131 pKa = 11.84 TKK1133 pKa = 9.87 MFTRR1137 pKa = 11.84 LIEE1140 pKa = 4.78 DD1141 pKa = 3.6 YY1142 pKa = 10.69 FEE1144 pKa = 4.66 SFSSFFSGSCLNNDD1158 pKa = 4.04 KK1159 pKa = 10.88 EE1160 pKa = 4.42 FEE1162 pKa = 4.06 NAILSMTINVRR1173 pKa = 11.84 EE1174 pKa = 4.06 GFLNYY1179 pKa = 10.95 SMDD1182 pKa = 3.45 HH1183 pKa = 6.22 SKK1185 pKa = 9.57 WGPMMCPFLFLMFLQNLKK1203 pKa = 10.78 LGDD1206 pKa = 3.77 DD1207 pKa = 3.66 QYY1209 pKa = 11.85 VRR1211 pKa = 11.84 SGKK1214 pKa = 9.93 DD1215 pKa = 2.96 HH1216 pKa = 7.0 VSTLLTWHH1224 pKa = 5.32 MHH1226 pKa = 5.98 KK1227 pKa = 10.39 LVEE1230 pKa = 4.52 VPFPVVNAMMKK1241 pKa = 10.22 SYY1243 pKa = 10.96 VKK1245 pKa = 10.62 SKK1247 pKa = 10.96 LKK1249 pKa = 10.43 LLRR1252 pKa = 11.84 GSEE1255 pKa = 4.21 TTVTEE1260 pKa = 4.62 RR1261 pKa = 11.84 IFRR1264 pKa = 11.84 QYY1266 pKa = 11.03 FEE1268 pKa = 4.14 MGIVPSHH1275 pKa = 6.73 ISSLIDD1281 pKa = 3.03 MGQGILHH1288 pKa = 6.42 NASDD1292 pKa = 4.64 FYY1294 pKa = 11.87 GLLSEE1299 pKa = 5.73 RR1300 pKa = 11.84 FINYY1304 pKa = 9.64 CIGVIFGEE1312 pKa = 4.25 RR1313 pKa = 11.84 PEE1315 pKa = 5.35 AYY1317 pKa = 8.97 TSSDD1321 pKa = 3.47 DD1322 pKa = 4.67 QITLFDD1328 pKa = 4.17 RR1329 pKa = 11.84 RR1330 pKa = 11.84 LSDD1333 pKa = 4.34 LVVSDD1338 pKa = 4.24 PEE1340 pKa = 4.11 EE1341 pKa = 4.02 VLVLLEE1347 pKa = 4.3 FQSHH1351 pKa = 7.06 LSGLLNKK1358 pKa = 10.04 FISPKK1363 pKa = 10.0 SVAGRR1368 pKa = 11.84 FAAEE1372 pKa = 4.29 FKK1374 pKa = 10.8 SRR1376 pKa = 11.84 FYY1378 pKa = 11.25 VWGEE1382 pKa = 3.79 EE1383 pKa = 4.27 VPLLTKK1389 pKa = 10.44 FVSAALHH1396 pKa = 5.1 NVKK1399 pKa = 10.36 CKK1401 pKa = 10.33 EE1402 pKa = 3.84 PHH1404 pKa = 5.55 QLCEE1408 pKa = 4.29 TIDD1411 pKa = 3.96 TIADD1415 pKa = 3.26 QAIANGVPVSLVNSIQRR1432 pKa = 11.84 RR1433 pKa = 11.84 TLDD1436 pKa = 3.44 LLKK1439 pKa = 10.78 YY1440 pKa = 10.81 ANFPLDD1446 pKa = 3.62 PFLLNTNTDD1455 pKa = 3.07 VKK1457 pKa = 11.06 DD1458 pKa = 3.33 WLDD1461 pKa = 3.06 GSRR1464 pKa = 11.84 GYY1466 pKa = 10.67 RR1467 pKa = 11.84 IQRR1470 pKa = 11.84 LIEE1473 pKa = 3.96 EE1474 pKa = 4.74 LCPNEE1479 pKa = 4.09 TKK1481 pKa = 10.45 VVRR1484 pKa = 11.84 KK1485 pKa = 9.43 LVRR1488 pKa = 11.84 KK1489 pKa = 9.15 LHH1491 pKa = 6.39 HH1492 pKa = 6.41 KK1493 pKa = 10.0 LKK1495 pKa = 10.68 NGEE1498 pKa = 4.07 FNEE1501 pKa = 4.26 EE1502 pKa = 3.79 FFLDD1506 pKa = 4.13 LFNRR1510 pKa = 11.84 DD1511 pKa = 2.93 KK1512 pKa = 11.41 TEE1514 pKa = 5.32 AILQLGDD1521 pKa = 3.89 LLGLEE1526 pKa = 4.38 EE1527 pKa = 5.86 DD1528 pKa = 4.42 LNQLADD1534 pKa = 4.17 VNWLNLNEE1542 pKa = 4.19 MFPLRR1547 pKa = 11.84 MVLRR1551 pKa = 11.84 QKK1553 pKa = 10.36 VVYY1556 pKa = 8.83 PSVMTFQEE1564 pKa = 3.84 EE1565 pKa = 4.63 RR1566 pKa = 11.84 IPSLIKK1572 pKa = 9.33 TLQNKK1577 pKa = 9.18 LCSKK1581 pKa = 7.7 FTRR1584 pKa = 11.84 GAQKK1588 pKa = 10.73 LLSEE1592 pKa = 5.82 AINKK1596 pKa = 9.51 SAFQSCISSGFIGLCKK1612 pKa = 9.92 TLGSRR1617 pKa = 11.84 CVRR1620 pKa = 11.84 NKK1622 pKa = 10.09 NRR1624 pKa = 11.84 EE1625 pKa = 3.63 NLYY1628 pKa = 10.18 IKK1630 pKa = 10.51 KK1631 pKa = 10.1 LLEE1634 pKa = 4.59 DD1635 pKa = 4.27 LTTDD1639 pKa = 3.28 DD1640 pKa = 4.69 HH1641 pKa = 5.7 VTRR1644 pKa = 11.84 VCNRR1648 pKa = 11.84 DD1649 pKa = 3.28 GITLYY1654 pKa = 10.24 ICDD1657 pKa = 4.07 KK1658 pKa = 10.26 QSHH1661 pKa = 6.71 PEE1663 pKa = 3.52 AHH1665 pKa = 7.23 RR1666 pKa = 11.84 DD1667 pKa = 3.79 HH1668 pKa = 6.98 ICLLRR1673 pKa = 11.84 PLLWDD1678 pKa = 3.93 YY1679 pKa = 11.68 ICISLSNSFEE1689 pKa = 4.4 LGVWVLAEE1697 pKa = 3.87 PTKK1700 pKa = 10.98 GKK1702 pKa = 10.34 NNSEE1706 pKa = 3.93 NLTLKK1711 pKa = 10.42 HH1712 pKa = 6.51 LNPCDD1717 pKa = 3.46 YY1718 pKa = 10.62 VARR1721 pKa = 11.84 KK1722 pKa = 9.25 PEE1724 pKa = 4.02 SSRR1727 pKa = 11.84 LLEE1730 pKa = 4.73 DD1731 pKa = 3.7 KK1732 pKa = 11.44 VNLNQVIQSVRR1743 pKa = 11.84 RR1744 pKa = 11.84 LYY1746 pKa = 10.25 PKK1748 pKa = 10.14 IFEE1751 pKa = 4.55 DD1752 pKa = 3.42 QLLPFMSDD1760 pKa = 2.75 MSSKK1764 pKa = 10.63 NMRR1767 pKa = 11.84 WSPRR1771 pKa = 11.84 IKK1773 pKa = 10.57 FLDD1776 pKa = 3.77 LCVLIDD1782 pKa = 3.94 INSEE1786 pKa = 4.09 SLSLISHH1793 pKa = 4.99 VVKK1796 pKa = 10.51 WKK1798 pKa = 10.14 RR1799 pKa = 11.84 DD1800 pKa = 3.16 EE1801 pKa = 4.7 HH1802 pKa = 5.42 YY1803 pKa = 9.59 TVLFSDD1809 pKa = 5.23 LANSHH1814 pKa = 5.48 QRR1816 pKa = 11.84 SDD1818 pKa = 3.16 SSLVDD1823 pKa = 3.31 EE1824 pKa = 5.31 FVVSTRR1830 pKa = 11.84 DD1831 pKa = 3.18 VCKK1834 pKa = 10.84 NFLKK1838 pKa = 10.4 QVYY1841 pKa = 8.75 FEE1843 pKa = 4.34 SFVRR1847 pKa = 11.84 EE1848 pKa = 4.28 FVATTRR1854 pKa = 11.84 TLGNFSWFPHH1864 pKa = 6.84 KK1865 pKa = 10.91 EE1866 pKa = 3.98 MMPSEE1871 pKa = 5.0 DD1872 pKa = 3.48 GAEE1875 pKa = 3.9 ALGPFQSFVSKK1886 pKa = 10.56 VVNKK1890 pKa = 10.21 NVEE1893 pKa = 3.91 RR1894 pKa = 11.84 PMFRR1898 pKa = 11.84 NDD1900 pKa = 2.99 LQFGFGWFSYY1910 pKa = 10.78 RR1911 pKa = 11.84 MGDD1914 pKa = 3.85 VVCNAAMLIRR1924 pKa = 11.84 QGLTNPKK1931 pKa = 9.89 AFKK1934 pKa = 10.28 SLKK1937 pKa = 10.42 DD1938 pKa = 3.16 LWDD1941 pKa = 3.29 YY1942 pKa = 9.67 MLNYY1946 pKa = 9.16 TKK1948 pKa = 10.78 GVLEE1952 pKa = 4.31 FSISVDD1958 pKa = 3.79 FTHH1961 pKa = 6.35 NQNNTDD1967 pKa = 3.96 CLRR1970 pKa = 11.84 KK1971 pKa = 9.51 FSLIFLVRR1979 pKa = 11.84 CQLQNPGVAEE1989 pKa = 4.27 LLSCSHH1995 pKa = 6.82 LFKK1998 pKa = 11.45 GEE2000 pKa = 3.43 IDD2002 pKa = 3.13 RR2003 pKa = 11.84 RR2004 pKa = 11.84 MLDD2007 pKa = 3.05 EE2008 pKa = 4.85 CLHH2011 pKa = 6.31 LLRR2014 pKa = 11.84 TDD2016 pKa = 3.49 SVFKK2020 pKa = 11.39 VNDD2023 pKa = 3.65 GVFDD2027 pKa = 3.45 IRR2029 pKa = 11.84 SEE2031 pKa = 4.03 EE2032 pKa = 4.11 FEE2034 pKa = 6.05 DD2035 pKa = 4.49 YY2036 pKa = 10.84 MEE2038 pKa = 5.69 DD2039 pKa = 3.73 PLILGDD2045 pKa = 4.1 SLEE2048 pKa = 4.52 LEE2050 pKa = 4.31 LLGSKK2055 pKa = 10.41 RR2056 pKa = 11.84 ILDD2059 pKa = 4.92 GIRR2062 pKa = 11.84 SIDD2065 pKa = 3.74 FEE2067 pKa = 4.43 RR2068 pKa = 11.84 VGPEE2072 pKa = 3.83 WEE2074 pKa = 4.2 PVPLTVKK2081 pKa = 10.21 MGALFEE2087 pKa = 4.44 GRR2089 pKa = 11.84 NLVQNIIVKK2098 pKa = 10.74 LEE2100 pKa = 4.04 TKK2102 pKa = 10.42 DD2103 pKa = 3.29 MKK2105 pKa = 11.22 VFLAGLEE2112 pKa = 4.33 GYY2114 pKa = 10.02 EE2115 pKa = 4.86 KK2116 pKa = 10.49 ISDD2119 pKa = 3.62 VLGNLFLHH2127 pKa = 7.06 RR2128 pKa = 11.84 FRR2130 pKa = 11.84 TGEE2133 pKa = 3.95 HH2134 pKa = 6.35 LLGSEE2139 pKa = 3.92 ISVILQEE2146 pKa = 4.05 LCIDD2150 pKa = 4.15 RR2151 pKa = 11.84 SILLIPLSLLPDD2163 pKa = 3.56 WFAFKK2168 pKa = 10.57 DD2169 pKa = 3.65 CRR2171 pKa = 11.84 LCFSKK2176 pKa = 10.7 SRR2178 pKa = 11.84 STLMYY2183 pKa = 9.04 EE2184 pKa = 3.84 IVGGRR2189 pKa = 11.84 FRR2191 pKa = 11.84 LKK2193 pKa = 10.65 GRR2195 pKa = 11.84 SCDD2198 pKa = 3.28 DD2199 pKa = 3.15 WLGGSVAEE2207 pKa = 6.0 DD2208 pKa = 2.97 IDD2210 pKa = 3.66
Molecular weight: 254.53 kDa
Isoelectric point according different methods:
IPC2.protein.svr19 5.929
IPC2_protein 5.957
IPC_protein 5.995
Toseland 6.224
ProMoST 6.338
Dawson 6.287
Bjellqvist 6.313
Wikipedia 6.287
Rodwell 6.275
Grimsley 6.313
Solomon 6.287
Lehninger 6.287
Nozaki 6.576
DTASelect 6.737
Thurlkill 6.751
EMBOSS 6.707
Sillero 6.664
Patrickios 4.279
IPC_peptide 6.3
IPC2_peptide 6.576
IPC2.peptide.svr19 6.614
Protein with the highest isoelectric point:
>sp|P09992|NCAP_LYCVA Nucleoprotein OS=Lymphocytic choriomeningitis virus (strain Armstrong) OX=11624 GN=N PE=1 SV=1
MM1 pKa = 6.89 GQIVTMFEE9 pKa = 4.18 ALPHH13 pKa = 6.72 IIDD16 pKa = 3.6 EE17 pKa = 4.74 VINIVIIVLIVITGIKK33 pKa = 9.78 AVYY36 pKa = 10.18 NFATCGIFALISFLLLAGRR55 pKa = 11.84 SCGMYY60 pKa = 10.22 GLKK63 pKa = 10.71 GPDD66 pKa = 3.03 IYY68 pKa = 11.22 KK69 pKa = 10.42 GVYY72 pKa = 7.62 QFKK75 pKa = 10.61 SVEE78 pKa = 3.78 FDD80 pKa = 3.1 MSHH83 pKa = 7.24 LNLTMPNACSANNSHH98 pKa = 6.94 HH99 pKa = 6.62 YY100 pKa = 10.55 ISMGTSGLEE109 pKa = 3.64 LTFTNDD115 pKa = 4.06 SIISHH120 pKa = 6.22 NFCNLTSAFNKK131 pKa = 8.9 KK132 pKa = 7.96 TFDD135 pKa = 3.5 HH136 pKa = 6.44 TLMSIVSSLHH146 pKa = 5.39 LSIRR150 pKa = 11.84 GNSNYY155 pKa = 10.09 KK156 pKa = 10.3 AVSCDD161 pKa = 3.5 FNNGITIQYY170 pKa = 10.54 NLTFSDD176 pKa = 3.65 AQSAQSQCRR185 pKa = 11.84 TFRR188 pKa = 11.84 GRR190 pKa = 11.84 VLDD193 pKa = 3.48 MFRR196 pKa = 11.84 TAFGGKK202 pKa = 7.8 YY203 pKa = 8.37 MRR205 pKa = 11.84 SGWGWTGSDD214 pKa = 5.62 GKK216 pKa = 7.46 TTWCSQTSYY225 pKa = 11.0 QYY227 pKa = 11.38 LIIQNRR233 pKa = 11.84 TWEE236 pKa = 4.11 NHH238 pKa = 4.41 CTYY241 pKa = 10.56 AGPFGMSRR249 pKa = 11.84 ILLSQEE255 pKa = 3.32 KK256 pKa = 9.1 TKK258 pKa = 10.85 FFTRR262 pKa = 11.84 RR263 pKa = 11.84 LAGTFTWTLSDD274 pKa = 3.24 SSGVEE279 pKa = 3.94 NPGGYY284 pKa = 10.31 CLTKK288 pKa = 10.36 WMILAAEE295 pKa = 4.82 LKK297 pKa = 10.61 CFGNTAVAKK306 pKa = 10.8 CNVNHH311 pKa = 7.13 DD312 pKa = 4.49 AEE314 pKa = 4.48 FCDD317 pKa = 3.72 MLRR320 pKa = 11.84 LIDD323 pKa = 3.93 YY324 pKa = 9.98 NKK326 pKa = 10.64 AALSKK331 pKa = 10.49 FKK333 pKa = 10.94 EE334 pKa = 4.33 DD335 pKa = 3.57 VEE337 pKa = 4.72 SALHH341 pKa = 6.33 LFKK344 pKa = 9.39 TTVNSLISDD353 pKa = 3.66 QLLMRR358 pKa = 11.84 NHH360 pKa = 6.52 LRR362 pKa = 11.84 DD363 pKa = 3.72 LMGVPYY369 pKa = 10.62 CNYY372 pKa = 10.22 SKK374 pKa = 10.7 FWYY377 pKa = 9.99 LEE379 pKa = 3.79 HH380 pKa = 7.26 AKK382 pKa = 9.73 TGEE385 pKa = 4.14 TSVPKK390 pKa = 10.34 CWLVTNGSYY399 pKa = 11.1 LNEE402 pKa = 4.12 THH404 pKa = 7.25 FSDD407 pKa = 5.32 QIEE410 pKa = 4.18 QEE412 pKa = 4.09 ADD414 pKa = 3.16 NMITEE419 pKa = 4.79 MLRR422 pKa = 11.84 KK423 pKa = 9.92 DD424 pKa = 3.54 YY425 pKa = 10.74 IKK427 pKa = 10.72 RR428 pKa = 11.84 QGSTPLALMDD438 pKa = 4.94 LLMFSTSAYY447 pKa = 9.34 LVSIFLHH454 pKa = 5.72 LVKK457 pKa = 10.37 IPTHH461 pKa = 4.95 RR462 pKa = 11.84 HH463 pKa = 4.33 IKK465 pKa = 10.38 GGSCPKK471 pKa = 9.93 PHH473 pKa = 7.45 RR474 pKa = 11.84 LTNKK478 pKa = 9.56 GICSCGAFKK487 pKa = 11.2 VPGVKK492 pKa = 9.07 TVWKK496 pKa = 10.27 RR497 pKa = 11.84 RR498 pKa = 3.55
Molecular weight: 56.13 kDa
Isoelectric point according different methods:
IPC2.protein.svr19 7.966
IPC2_protein 8.053
IPC_protein 7.849
Toseland 7.512
ProMoST 8.507
Dawson 8.609
Bjellqvist 8.946
Wikipedia 8.536
Rodwell 8.653
Grimsley 7.527
Solomon 8.668
Lehninger 8.668
Nozaki 9.165
DTASelect 8.668
Thurlkill 8.726
EMBOSS 8.799
Sillero 9.048
Patrickios 4.012
IPC_peptide 8.653
IPC2_peptide 7.951
IPC2.peptide.svr19 8.092
Peptides (in silico digests for buttom-up proteomics)
Below you can find
in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.
Try ESI
ChTry ESI
ArgC ESI
LysN ESI
TryLysC ESI
Try MALDI
ChTry MALDI
ArgC MALDI
LysN MALDI
TryLysC MALDI
Try LTQ
ChTry LTQ
ArgC LTQ
LysN LTQ
TryLysC LTQ
Try MSlow
ChTry MSlow
ArgC MSlow
LysN MSlow
TryLysC MSlow
Try MShigh
ChTry MShigh
ArgC MShigh
LysN MShigh
TryLysC MShigh
General Statistics
Number of major isoforms
Number of additional isoforms
Number of all proteins
Number of amino acids
Min. Seq. Length
Max. Seq. Length
Avg. Seq. Length
Avg. Mol. Weight
4
0
4
3356
90
2210
839.0
95.76
Amino acid frequency
Ala
Cys
Asp
Glu
Phe
Gly
His
Ile
Lys
Leu
4.023 ± 0.954
2.741 ± 0.481
5.781 ± 0.574
6.526 ± 1.465
5.334 ± 1.105
5.334 ± 0.696
2.265 ± 0.381
5.483 ± 0.331
7.032 ± 0.32
11.919 ± 0.854
Met
Asn
Gln
Pro
Arg
Ser
Thr
Val
Trp
Tyr
2.831 ± 0.277
5.036 ± 0.224
3.367 ± 0.699
3.367 ± 0.775
5.423 ± 0.48
8.79 ± 0.223
4.887 ± 0.965
5.959 ± 0.47
1.103 ± 0.252
2.801 ± 0.35
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level
Most of the basic statistics you can see at this page can be downloaded from this CSV file
For dipeptide frequency statistics click here