Aeribacillus pallidus

Taxonomy: cellular organisms; Bacteria; Terrabacteria group; Firmicutes; Bacilli; Bacillales; Bacillaceae; Aeribacillus

Average proteome isoelectric point is 6.56

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 3519 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A163ZUK5|A0A163ZUK5_9BACI Acetoin utilization protein AcuB OS=Aeribacillus pallidus OX=33936 GN=AZI98_05825 PE=4 SV=1
MM1 pKa = 7.69NEE3 pKa = 3.57EE4 pKa = 5.76DD5 pKa = 3.29IQQFQNVIKK14 pKa = 10.31IYY16 pKa = 10.52VLSDD20 pKa = 3.18EE21 pKa = 4.5QLNEE25 pKa = 3.43EE26 pKa = 4.46DD27 pKa = 4.15ADD29 pKa = 3.73IFRR32 pKa = 11.84EE33 pKa = 4.02FAMDD37 pKa = 4.28LVDD40 pKa = 5.89GKK42 pKa = 10.21DD43 pKa = 3.6FCALILDD50 pKa = 3.91FHH52 pKa = 7.48VNGEE56 pKa = 4.14LFEE59 pKa = 4.55NLPLDD64 pKa = 4.53LKK66 pKa = 11.39VEE68 pKa = 4.63DD69 pKa = 3.95YY70 pKa = 11.27QKK72 pKa = 10.76ILHH75 pKa = 6.36AVNSEE80 pKa = 3.78YY81 pKa = 10.82DD82 pKa = 3.1ISYY85 pKa = 11.13VNLDD89 pKa = 2.77HH90 pKa = 7.49WFYY93 pKa = 11.36LSQDD97 pKa = 3.05

Molecular weight: 11.54 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A165Y224|A0A165Y224_9BACI Cyclic pyranopterin monophosphate synthase OS=Aeribacillus pallidus OX=33936 GN=moaC PE=3 SV=1
MM1 pKa = 7.35KK2 pKa = 9.42RR3 pKa = 11.84TYY5 pKa = 10.34QPNKK9 pKa = 8.21RR10 pKa = 11.84KK11 pKa = 9.62RR12 pKa = 11.84SKK14 pKa = 9.59VHH16 pKa = 5.83GFRR19 pKa = 11.84SRR21 pKa = 11.84MSTKK25 pKa = 10.29NGRR28 pKa = 11.84KK29 pKa = 8.49VLARR33 pKa = 11.84RR34 pKa = 11.84RR35 pKa = 11.84RR36 pKa = 11.84KK37 pKa = 9.05GRR39 pKa = 11.84KK40 pKa = 8.7VLSAA44 pKa = 4.05

Molecular weight: 5.31 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

3519

0

3519

1010804

26

2396

287.2

32.39

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

6.911 ± 0.04

0.785 ± 0.013

4.834 ± 0.03

7.821 ± 0.055

4.682 ± 0.041

6.703 ± 0.037

2.181 ± 0.017

8.264 ± 0.043

7.672 ± 0.039

9.74 ± 0.048

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.61 ± 0.019

4.334 ± 0.026

3.626 ± 0.027

3.714 ± 0.027

4.127 ± 0.031

5.716 ± 0.029

4.92 ± 0.023

6.896 ± 0.029

0.993 ± 0.017

3.47 ± 0.022
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski