Capronia epimyces CBS 606.96

Taxonomy: cellular organisms; Eukaryota; Opisthokonta; Fungi; Dikarya; Ascomycota; saccharomyceta; Pezizomycotina; leotiomyceta; Eurotiomycetes; Chaetothyriomycetidae; Chaetothyriales; Herpotrichiellaceae; Capronia; Capronia epimyces

Average proteome isoelectric point is 6.45

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 10469 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|W9YJX4|W9YJX4_9EURO Translation initiation factor 2 subunit 1 OS=Capronia epimyces CBS 606.96 OX=1182542 GN=A1O3_06382 PE=3 SV=1
MM1 pKa = 7.62LQRR4 pKa = 11.84QKK6 pKa = 11.55DD7 pKa = 3.76GVLTLKK13 pKa = 10.92LSGSVLTDD21 pKa = 3.09QADD24 pKa = 3.83RR25 pKa = 11.84TGYY28 pKa = 9.72VAANYY33 pKa = 8.86QFQFDD38 pKa = 4.53APPQAGAIYY47 pKa = 9.51TSGFSLCSNNSLALGGSAIWYY68 pKa = 6.87EE69 pKa = 4.22CLSGSFYY76 pKa = 11.37NLYY79 pKa = 9.73DD80 pKa = 4.0RR81 pKa = 11.84KK82 pKa = 9.8WADD85 pKa = 3.1HH86 pKa = 6.64CFPIYY91 pKa = 10.37LVALIGSSAPPATQASDD108 pKa = 3.66GQPAATTVVPSITQISDD125 pKa = 3.15GQPQVTSAVVTQISDD140 pKa = 3.6GQPQGNTAVVTQISDD155 pKa = 3.85GQPQAATATGAPVSQISDD173 pKa = 3.86GQPQAPTGSPVSQISDD189 pKa = 3.82GQPQAPTGSPVSQISDD205 pKa = 3.82GQPQAPTGAPVSQISDD221 pKa = 3.86GQPQAPTATATPVSQISDD239 pKa = 3.92GQPQAPKK246 pKa = 8.88GTPVSQISDD255 pKa = 3.98GQPQAPTGAPVSQISDD271 pKa = 3.86GQPQAPTAIPVSQISDD287 pKa = 3.85GQPQAPTGAPVSQISDD303 pKa = 3.86GQPQAPTATPVSQISDD319 pKa = 3.98GQPQAPTATVEE330 pKa = 4.08AASATGTSSAAPATYY345 pKa = 9.62TGAAPRR351 pKa = 11.84DD352 pKa = 3.92TLSGSLAVAAGIVGAIALLL371 pKa = 3.88

Molecular weight: 36.98 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|W9XQD0|W9XQD0_9EURO HpcH_HpaI domain-containing protein OS=Capronia epimyces CBS 606.96 OX=1182542 GN=A1O3_07809 PE=4 SV=1
MM1 pKa = 7.31TRR3 pKa = 11.84LKK5 pKa = 10.99NLLPLRR11 pKa = 11.84NQLPPLILLLKK22 pKa = 10.02NAPLLRR28 pKa = 11.84NQIPLKK34 pKa = 10.84NLLQPRR40 pKa = 11.84KK41 pKa = 9.46RR42 pKa = 11.84PRR44 pKa = 11.84LKK46 pKa = 10.84SPLLLKK52 pKa = 10.49RR53 pKa = 11.84PPPLMLLKK61 pKa = 10.46NRR63 pKa = 11.84PRR65 pKa = 11.84LKK67 pKa = 10.48SLPPLMLLPKK77 pKa = 10.08NRR79 pKa = 11.84PRR81 pKa = 11.84LKK83 pKa = 10.69SLLPLMLLPKK93 pKa = 10.24NRR95 pKa = 11.84PLLKK99 pKa = 10.44NQLLLRR105 pKa = 11.84IRR107 pKa = 11.84PRR109 pKa = 11.84LKK111 pKa = 10.71NLLPLKK117 pKa = 10.63NLLPPLKK124 pKa = 10.35NRR126 pKa = 11.84PRR128 pKa = 11.84QKK130 pKa = 10.8NLLRR134 pKa = 11.84RR135 pKa = 11.84KK136 pKa = 9.34NN137 pKa = 3.39

Molecular weight: 16.24 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

10469

0

10469

5150417

50

5422

492.0

54.35

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

8.864 ± 0.02

1.16 ± 0.009

5.789 ± 0.015

6.04 ± 0.021

3.634 ± 0.016

6.917 ± 0.02

2.509 ± 0.01

4.721 ± 0.016

4.62 ± 0.022

9.078 ± 0.025

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.036 ± 0.008

3.445 ± 0.012

6.117 ± 0.023

4.182 ± 0.017

6.227 ± 0.02

8.151 ± 0.025

6.059 ± 0.019

6.278 ± 0.019

1.445 ± 0.009

2.728 ± 0.011
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski