Alicyclobacillus ferrooxydans

Taxonomy: cellular organisms; Bacteria; Terrabacteria group; Firmicutes; Bacilli; Bacillales; Alicyclobacillaceae; Alicyclobacillus

Average proteome isoelectric point is 6.47

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 4142 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A0P9GNW6|A0A0P9GNW6_9BACL FAD-binding PCMH-type domain-containing protein OS=Alicyclobacillus ferrooxydans OX=471514 GN=AN477_18095 PE=4 SV=1
MM1 pKa = 7.51KK2 pKa = 9.87VTIEE6 pKa = 4.09TSGQKK11 pKa = 10.65YY12 pKa = 10.09SVTLEE17 pKa = 4.23MDD19 pKa = 3.61DD20 pKa = 3.35KK21 pKa = 11.25TYY23 pKa = 11.06VANHH27 pKa = 6.38EE28 pKa = 4.22LTSYY32 pKa = 10.45GAHH35 pKa = 6.31QIGGVNFDD43 pKa = 3.55EE44 pKa = 4.42QDD46 pKa = 2.93FDD48 pKa = 5.46RR49 pKa = 11.84EE50 pKa = 4.16LEE52 pKa = 4.23YY53 pKa = 10.86IMSDD57 pKa = 3.04IEE59 pKa = 4.22SQAYY63 pKa = 8.46EE64 pKa = 3.93LAYY67 pKa = 10.71YY68 pKa = 10.28DD69 pKa = 3.39AEE71 pKa = 4.06TRR73 pKa = 11.84EE74 pKa = 4.16RR75 pKa = 11.84SEE77 pKa = 4.06SDD79 pKa = 2.89EE80 pKa = 5.63DD81 pKa = 4.92GDD83 pKa = 5.47DD84 pKa = 3.59EE85 pKa = 4.95

Molecular weight: 9.82 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A0P9GQL5|A0A0P9GQL5_9BACL Acetyltransferase OS=Alicyclobacillus ferrooxydans OX=471514 GN=AN477_14060 PE=4 SV=1
MM1 pKa = 7.36FVPIWAMRR9 pKa = 11.84HH10 pKa = 5.03FCSLWTIQRR19 pKa = 11.84KK20 pKa = 8.11IRR22 pKa = 11.84LYY24 pKa = 10.32RR25 pKa = 11.84RR26 pKa = 11.84AGLRR30 pKa = 11.84RR31 pKa = 11.84RR32 pKa = 11.84PRR34 pKa = 11.84SVRR37 pKa = 11.84TVLTDD42 pKa = 3.18SRR44 pKa = 11.84AKK46 pKa = 10.76ARR48 pKa = 11.84TFYY51 pKa = 11.15ALSFAFYY58 pKa = 10.8FEE60 pKa = 5.21FEE62 pKa = 4.23SCDD65 pKa = 3.31VIEE68 pKa = 4.53NVRR71 pKa = 11.84QRR73 pKa = 11.84TTEE76 pKa = 3.8NEE78 pKa = 4.17RR79 pKa = 11.84QGSNAKK85 pKa = 9.85QKK87 pKa = 10.87EE88 pKa = 4.31DD89 pKa = 3.82VEE91 pKa = 4.56GSPAACPLHH100 pKa = 6.8AWVKK104 pKa = 8.47WRR106 pKa = 11.84CTGGPP111 pKa = 3.35

Molecular weight: 13.1 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

4142

0

4142

1212945

26

1718

292.8

32.37

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

8.928 ± 0.041

0.824 ± 0.011

5.022 ± 0.032

5.916 ± 0.043

4.015 ± 0.03

7.823 ± 0.033

2.429 ± 0.018

5.86 ± 0.033

3.962 ± 0.029

9.938 ± 0.042

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.713 ± 0.018

3.386 ± 0.026

4.357 ± 0.024

4.053 ± 0.032

5.751 ± 0.034

6.328 ± 0.035

5.841 ± 0.032

8.371 ± 0.031

1.444 ± 0.018

3.038 ± 0.021
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski