Dentipellis sp. KUC8613

Taxonomy: cellular organisms; Eukaryota; Opisthokonta; Fungi; Dikarya; Basidiomycota; Agaricomycotina; Agaricomycetes; Agaricomycetes incertae sedis; Russulales; Hericiaceae; Dentipellis; unclassified Dentipellis

Average proteome isoelectric point is 6.97

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 14287 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A5B1QFU5|A0A5B1QFU5_9AGAM Uncharacterized protein OS=Dentipellis sp. KUC8613 OX=1883078 GN=DENSPDRAFT_833366 PE=4 SV=1
MM1 pKa = 7.34FATLFTVTLLSAGAIKK17 pKa = 10.46GALAGLAINSPTLVQCEE34 pKa = 4.09DD35 pKa = 3.6AHH37 pKa = 6.88VSWASTKK44 pKa = 10.43GPYY47 pKa = 10.08NLIVTPGDD55 pKa = 3.95EE56 pKa = 4.39PCGDD60 pKa = 4.68AIVDD64 pKa = 4.35LGDD67 pKa = 3.93HH68 pKa = 7.39DD69 pKa = 4.64GTTMTYY75 pKa = 10.74NVALPAGQKK84 pKa = 10.12VLLSLQDD91 pKa = 3.73ANGDD95 pKa = 3.93EE96 pKa = 4.53AWSQEE101 pKa = 3.93LTVQPGSNSACLPASLQPSSSIATLSAASSSVKK134 pKa = 9.85FASSSAPFSLSSTVVPLTAVTPATTISALALPSDD168 pKa = 4.25SAAAAPSDD176 pKa = 4.17TIGGDD181 pKa = 3.57DD182 pKa = 3.63SDD184 pKa = 4.41APSVVGGAANAASNPFSGAPAMHH207 pKa = 6.31QLYY210 pKa = 8.28TPAMFLSALGAAFFVALL227 pKa = 4.35

Molecular weight: 22.5 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A5B1RER3|A0A5B1RER3_9AGAM Uncharacterized protein OS=Dentipellis sp. KUC8613 OX=1883078 GN=DENSPDRAFT_887317 PE=4 SV=1
MM1 pKa = 6.33QTRR4 pKa = 11.84LRR6 pKa = 11.84LVLSLSRR13 pKa = 11.84CLVPSLPPSRR23 pKa = 11.84PLRR26 pKa = 11.84AVAPPHH32 pKa = 5.43TLVVSSHH39 pKa = 5.32HH40 pKa = 6.18RR41 pKa = 11.84AVILSRR47 pKa = 11.84HH48 pKa = 5.44RR49 pKa = 11.84ASLAHH54 pKa = 6.85LPRR57 pKa = 11.84PASTLVTSSSRR68 pKa = 11.84RR69 pKa = 11.84RR70 pKa = 11.84ILVCRR75 pKa = 11.84HH76 pKa = 5.03RR77 pKa = 11.84TLVAPSFPRR86 pKa = 11.84AVALSRR92 pKa = 11.84SSRR95 pKa = 11.84APPAVSMLSPRR106 pKa = 11.84RR107 pKa = 11.84VVVASSRR114 pKa = 11.84PAPPALLVPLPPLQPPPCRR133 pKa = 11.84APHH136 pKa = 6.17PRR138 pKa = 11.84VAPSPSVASSRR149 pKa = 11.84PCRR152 pKa = 11.84ARR154 pKa = 11.84RR155 pKa = 11.84VRR157 pKa = 11.84VAPVASVSRR166 pKa = 11.84PSRR169 pKa = 11.84PSRR172 pKa = 11.84PSRR175 pKa = 11.84PRR177 pKa = 11.84LAVAPILRR185 pKa = 11.84PSRR188 pKa = 11.84RR189 pKa = 11.84SRR191 pKa = 11.84HH192 pKa = 4.6RR193 pKa = 11.84ARR195 pKa = 11.84PRR197 pKa = 11.84RR198 pKa = 11.84RR199 pKa = 11.84AVAPVVPLCRR209 pKa = 11.84RR210 pKa = 11.84ARR212 pKa = 11.84RR213 pKa = 11.84AVAALPLSALAPPSRR228 pKa = 11.84PSHH231 pKa = 5.54AHH233 pKa = 5.6HH234 pKa = 6.81VPSAHH239 pKa = 6.28AQPSRR244 pKa = 11.84PSRR247 pKa = 11.84VRR249 pKa = 11.84RR250 pKa = 11.84ARR252 pKa = 11.84HH253 pKa = 5.49APRR256 pKa = 11.84SVPRR260 pKa = 11.84HH261 pKa = 4.69ARR263 pKa = 11.84RR264 pKa = 11.84ARR266 pKa = 11.84RR267 pKa = 11.84TPFASRR273 pKa = 11.84PSRR276 pKa = 11.84HH277 pKa = 5.38RR278 pKa = 11.84ASRR281 pKa = 11.84RR282 pKa = 11.84LRR284 pKa = 11.84AVVPSRR290 pKa = 11.84PSRR293 pKa = 11.84VRR295 pKa = 11.84RR296 pKa = 11.84AVATFAPLSAIAPPSRR312 pKa = 11.84PAHH315 pKa = 5.73AHH317 pKa = 5.72HH318 pKa = 7.09APGAIAPVAAFAPSRR333 pKa = 11.84RR334 pKa = 11.84RR335 pKa = 11.84AVAPVARR342 pKa = 11.84LSRR345 pKa = 11.84PIRR348 pKa = 11.84AAGVMPSRR356 pKa = 11.84RR357 pKa = 11.84RR358 pKa = 11.84HH359 pKa = 4.87ALARR363 pKa = 11.84PARR366 pKa = 11.84PRR368 pKa = 11.84AHH370 pKa = 6.58FVPVLHH376 pKa = 6.7LHH378 pKa = 5.68MDD380 pKa = 3.97VYY382 pKa = 11.68VLLL385 pKa = 4.72

Molecular weight: 42.16 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

14287

0

14287

5785676

49

5066

405.0

44.52

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

9.826 ± 0.026

1.432 ± 0.012

5.317 ± 0.019

5.521 ± 0.025

3.516 ± 0.014

6.459 ± 0.023

2.752 ± 0.011

4.3 ± 0.016

4.016 ± 0.02

9.138 ± 0.027

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.004 ± 0.009

2.977 ± 0.013

7.494 ± 0.037

3.558 ± 0.015

7.051 ± 0.031

8.549 ± 0.028

5.866 ± 0.014

6.346 ± 0.016

1.405 ± 0.008

2.473 ± 0.012
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski