Torque teno mini virus 6

Taxonomy: Viruses; Anelloviridae; Betatorquevirus

Average proteome isoelectric point is 7.54

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 3 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|Q9QU37|Q9QU37_9VIRU Uncharacterized protein OS=Torque teno mini virus 6 OX=687374 PE=4 SV=1
MM1 pKa = 7.06NFEE4 pKa = 4.28YY5 pKa = 10.1PDD7 pKa = 3.79YY8 pKa = 10.96SPKK11 pKa = 10.34EE12 pKa = 3.99LQLQWINNIVHH23 pKa = 5.72THH25 pKa = 7.16DD26 pKa = 5.23LLCKK30 pKa = 8.35CTKK33 pKa = 9.86PLEE36 pKa = 4.26HH37 pKa = 7.01TIHH40 pKa = 7.04GIIKK44 pKa = 9.73QEE46 pKa = 3.87PNLRR50 pKa = 11.84LEE52 pKa = 4.55KK53 pKa = 9.4EE54 pKa = 4.49TKK56 pKa = 10.12KK57 pKa = 10.92LLEE60 pKa = 4.48KK61 pKa = 10.69CLTSTEE67 pKa = 4.34DD68 pKa = 3.32GSLVEE73 pKa = 5.22DD74 pKa = 4.41ALDD77 pKa = 3.88GLGDD81 pKa = 3.99GEE83 pKa = 4.79LEE85 pKa = 4.26ALFAEE90 pKa = 4.65NTGEE94 pKa = 4.08DD95 pKa = 3.34TGG97 pKa = 4.11

Molecular weight: 10.97 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|Q9QU36|Q9QU36_9VIRU Capsid protein OS=Torque teno mini virus 6 OX=687374 PE=3 SV=1
MM1 pKa = 7.51INLVKK6 pKa = 10.56HH7 pKa = 5.99ILNMTFVLRR16 pKa = 11.84LEE18 pKa = 4.57DD19 pKa = 5.83VPLQWKK25 pKa = 10.47NSVTLQNKK33 pKa = 7.67TNIPYY38 pKa = 9.79PILSSKK44 pKa = 7.28QLRR47 pKa = 11.84YY48 pKa = 9.92RR49 pKa = 11.84FQHH52 pKa = 5.81QPLKK56 pKa = 10.49PISTTLTKK64 pKa = 10.72EE65 pKa = 3.71KK66 pKa = 10.91DD67 pKa = 3.56SLQKK71 pKa = 10.94KK72 pKa = 9.45LLNEE76 pKa = 4.3SKK78 pKa = 9.37KK79 pKa = 9.36TMEE82 pKa = 4.35LNKK85 pKa = 10.11LFCRR89 pKa = 11.84LQEE92 pKa = 4.06QQWTSRR98 pKa = 11.84HH99 pKa = 4.46QSKK102 pKa = 9.65AHH104 pKa = 6.08HH105 pKa = 5.71RR106 pKa = 11.84TKK108 pKa = 10.46HH109 pKa = 4.54RR110 pKa = 11.84QRR112 pKa = 11.84KK113 pKa = 7.72KK114 pKa = 9.86KK115 pKa = 9.65RR116 pKa = 11.84RR117 pKa = 11.84HH118 pKa = 5.75KK119 pKa = 10.61SSSSSDD125 pKa = 3.41SEE127 pKa = 4.43GNNDD131 pKa = 3.29SSSSEE136 pKa = 4.04SSSYY140 pKa = 11.27

Molecular weight: 16.57 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

3

0

3

893

97

656

297.7

34.84

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

2.576 ± 0.572

1.792 ± 0.349

4.479 ± 0.642

5.151 ± 2.129

3.919 ± 0.944

4.591 ± 1.127

2.576 ± 1.082

6.271 ± 1.089

8.511 ± 1.433

9.183 ± 2.129

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

1.792 ± 0.172

6.159 ± 0.23

6.271 ± 1.29

6.159 ± 0.709

5.711 ± 1.061

6.607 ± 2.494

8.511 ± 0.74

2.912 ± 0.232

2.24 ± 0.512

4.591 ± 1.294
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski