Ailuropoda melanoleuca papillomavirus 1

Taxonomy: Viruses; Monodnaviria; Shotokuvirae; Cossaviricota; Papovaviricetes; Zurhausenvirales; Papillomaviridae; Firstpapillomavirinae; Omegapapillomavirus; Omegapapillomavirus 1

Average proteome isoelectric point is 6.7

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 5 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A220IGE4|A0A220IGE4_9PAPI Minor capsid protein L2 OS=Ailuropoda melanoleuca papillomavirus 1 OX=2016454 GN=L2 PE=3 SV=1
MM1 pKa = 8.05EE2 pKa = 4.36YY3 pKa = 10.16PGTNGADD10 pKa = 4.37FILQEE15 pKa = 4.67ADD17 pKa = 3.78CSDD20 pKa = 3.89LSDD23 pKa = 3.63EE24 pKa = 4.47NFTEE28 pKa = 4.77GEE30 pKa = 4.02EE31 pKa = 4.13DD32 pKa = 4.36DD33 pKa = 5.11EE34 pKa = 5.89DD35 pKa = 5.92FIDD38 pKa = 4.1HH39 pKa = 6.86ACVPTCSEE47 pKa = 4.58EE48 pKa = 4.01YY49 pKa = 10.88LPMLTYY55 pKa = 9.32QTEE58 pKa = 4.13QADD61 pKa = 3.82NEE63 pKa = 4.61HH64 pKa = 6.11IQLLKK69 pKa = 10.35RR70 pKa = 11.84KK71 pKa = 8.79YY72 pKa = 9.98VSPSPKK78 pKa = 9.33MKK80 pKa = 10.73LNVDD84 pKa = 3.95LSPRR88 pKa = 11.84LAAMQLTPEE97 pKa = 4.39RR98 pKa = 11.84KK99 pKa = 8.6AKK101 pKa = 10.17RR102 pKa = 11.84RR103 pKa = 11.84LFEE106 pKa = 5.13HH107 pKa = 6.92SDD109 pKa = 3.11SGYY112 pKa = 11.17GNTLEE117 pKa = 4.39AQSEE121 pKa = 4.31EE122 pKa = 4.27KK123 pKa = 9.99MGEE126 pKa = 3.97EE127 pKa = 4.27TQVEE131 pKa = 4.34TGEE134 pKa = 4.22EE135 pKa = 4.17EE136 pKa = 4.08EE137 pKa = 4.69EE138 pKa = 4.12EE139 pKa = 4.25AGEE142 pKa = 5.04DD143 pKa = 4.08GGSQCIEE150 pKa = 4.11NGVGRR155 pKa = 11.84ATEE158 pKa = 3.9NALPIQLIKK167 pKa = 11.17SKK169 pKa = 10.61DD170 pKa = 3.38SRR172 pKa = 11.84VAKK175 pKa = 10.22LGKK178 pKa = 10.17FKK180 pKa = 9.98EE181 pKa = 4.67TYY183 pKa = 9.92DD184 pKa = 3.44VSFGDD189 pKa = 3.6LCRR192 pKa = 11.84PFKK195 pKa = 10.66SDD197 pKa = 2.9KK198 pKa = 9.82TVNAEE203 pKa = 3.95WVCAAFGVHH212 pKa = 7.4DD213 pKa = 4.76SVCDD217 pKa = 4.1SIQEE221 pKa = 4.14VLKK224 pKa = 10.62SYY226 pKa = 9.61CTFTHH231 pKa = 6.08ITCEE235 pKa = 3.79QSSWGFILLMLLCFTTGKK253 pKa = 10.29CRR255 pKa = 11.84TTVEE259 pKa = 4.44KK260 pKa = 10.81LLSTLLAIKK269 pKa = 9.7TEE271 pKa = 4.38ALLSDD276 pKa = 3.91PPKK279 pKa = 10.33VRR281 pKa = 11.84SGAAAMYY288 pKa = 8.6WYY290 pKa = 10.61KK291 pKa = 11.42GMLTNTSAVWGEE303 pKa = 3.86KK304 pKa = 9.92PKK306 pKa = 10.38WITTQVSLAHH316 pKa = 5.99ITSEE320 pKa = 4.01NVPFDD325 pKa = 4.31LSAMVQWAYY334 pKa = 11.05DD335 pKa = 3.44NEE337 pKa = 4.36YY338 pKa = 10.44TEE340 pKa = 4.71EE341 pKa = 4.02CQIAYY346 pKa = 9.52EE347 pKa = 4.21YY348 pKa = 11.45ASLADD353 pKa = 3.8VEE355 pKa = 4.53PNAAAFLKK363 pKa = 10.91SNSQAKK369 pKa = 8.88HH370 pKa = 5.7VKK372 pKa = 9.92DD373 pKa = 3.5CAIMCRR379 pKa = 11.84HH380 pKa = 5.81YY381 pKa = 10.91KK382 pKa = 8.96RR383 pKa = 11.84AEE385 pKa = 3.88MQRR388 pKa = 11.84MSMRR392 pKa = 11.84QWIEE396 pKa = 3.6RR397 pKa = 11.84QRR399 pKa = 11.84DD400 pKa = 3.82RR401 pKa = 11.84ISGEE405 pKa = 4.14GDD407 pKa = 2.66WKK409 pKa = 9.78TIVYY413 pKa = 8.79FLKK416 pKa = 10.04YY417 pKa = 9.73QDD419 pKa = 3.82VEE421 pKa = 4.42FVPFMVKK428 pKa = 10.49FKK430 pKa = 10.96LFLKK434 pKa = 9.93GIPKK438 pKa = 10.02KK439 pKa = 10.51NCLVFYY445 pKa = 9.99GPPNTGKK452 pKa = 10.3SAFCMSLLKK461 pKa = 10.8FFGGKK466 pKa = 8.76VVSFMNSRR474 pKa = 11.84SHH476 pKa = 7.31FWLQPLLDD484 pKa = 4.56GKK486 pKa = 11.01LGLLDD491 pKa = 5.31DD492 pKa = 4.61ATDD495 pKa = 3.72VCWDD499 pKa = 3.66FFDD502 pKa = 5.26AYY504 pKa = 10.65LRR506 pKa = 11.84NAIDD510 pKa = 4.06GNPVSVDD517 pKa = 3.32SKK519 pKa = 11.03HH520 pKa = 6.79RR521 pKa = 11.84APQQVKK527 pKa = 10.24LPPLLVTTNIDD538 pKa = 2.81IRR540 pKa = 11.84KK541 pKa = 7.42HH542 pKa = 5.62VKK544 pKa = 8.02WQYY547 pKa = 9.15LHH549 pKa = 7.15SRR551 pKa = 11.84VQLVNFANEE560 pKa = 3.96FPITDD565 pKa = 4.27DD566 pKa = 3.92GNCVFDD572 pKa = 3.45FHH574 pKa = 6.36EE575 pKa = 4.83RR576 pKa = 11.84NWKK579 pKa = 10.28AFFGKK584 pKa = 9.64VWARR588 pKa = 11.84LDD590 pKa = 3.72LSDD593 pKa = 6.34DD594 pKa = 3.53EE595 pKa = 5.94DD596 pKa = 3.47EE597 pKa = 5.69GYY599 pKa = 10.87DD600 pKa = 3.58GGSEE604 pKa = 3.77QTFRR608 pKa = 11.84CTARR612 pKa = 11.84KK613 pKa = 9.27NDD615 pKa = 3.52GVII618 pKa = 3.41

Molecular weight: 70.3 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A220IGF5|A0A220IGF5_9PAPI Major capsid protein L1 OS=Ailuropoda melanoleuca papillomavirus 1 OX=2016454 GN=L1 PE=3 SV=1
MM1 pKa = 7.84EE2 pKa = 6.04DD3 pKa = 2.95LSKK6 pKa = 11.09RR7 pKa = 11.84LGALQEE13 pKa = 4.36KK14 pKa = 9.89MMEE17 pKa = 4.15LYY19 pKa = 7.97EE20 pKa = 4.37TGSASLRR27 pKa = 11.84TQVIYY32 pKa = 10.18WLLMRR37 pKa = 11.84KK38 pKa = 7.92EE39 pKa = 3.94QALLYY44 pKa = 10.18HH45 pKa = 7.03ARR47 pKa = 11.84QCGANRR53 pKa = 11.84LGMCAVPPLQVSKK66 pKa = 11.14ARR68 pKa = 11.84ASKK71 pKa = 9.94AIKK74 pKa = 8.48MHH76 pKa = 6.59LVLTSLEE83 pKa = 3.98GSKK86 pKa = 10.96YY87 pKa = 10.8GLLPWTMRR95 pKa = 11.84EE96 pKa = 3.89TSYY99 pKa = 11.29EE100 pKa = 3.99RR101 pKa = 11.84YY102 pKa = 9.28KK103 pKa = 11.29ANPKK107 pKa = 8.48NTLKK111 pKa = 10.95KK112 pKa = 10.05EE113 pKa = 4.13GVPVQVLYY121 pKa = 10.98DD122 pKa = 3.55GEE124 pKa = 4.25KK125 pKa = 10.36AKK127 pKa = 10.79GVEE130 pKa = 4.23YY131 pKa = 10.68VLWTSVFAQGSCGKK145 pKa = 7.06WTCFQGGVDD154 pKa = 3.81SSGLYY159 pKa = 9.42VDD161 pKa = 3.83KK162 pKa = 10.8EE163 pKa = 4.17GRR165 pKa = 11.84KK166 pKa = 9.26QYY168 pKa = 11.3YY169 pKa = 10.2EE170 pKa = 5.0DD171 pKa = 3.81FQKK174 pKa = 11.27DD175 pKa = 3.48SLKK178 pKa = 11.12YY179 pKa = 9.11GVKK182 pKa = 10.39GVWTVVFGNEE192 pKa = 3.94TLYY195 pKa = 11.24SSASPQPCEE204 pKa = 3.82QPFPAVVDD212 pKa = 3.96TTDD215 pKa = 3.66EE216 pKa = 4.28VPPFCSPSPEE226 pKa = 4.16KK227 pKa = 10.94AEE229 pKa = 4.04EE230 pKa = 3.76QALPSKK236 pKa = 10.55PKK238 pKa = 10.19GSSGSSPRR246 pKa = 11.84FGKK249 pKa = 9.55QGKK252 pKa = 9.42RR253 pKa = 11.84GSSKK257 pKa = 10.52RR258 pKa = 11.84KK259 pKa = 9.27LSEE262 pKa = 3.83EE263 pKa = 4.59GEE265 pKa = 4.3QQGQQQQQQLKK276 pKa = 10.07KK277 pKa = 9.7PYY279 pKa = 9.15CEE281 pKa = 4.01QPASEE286 pKa = 4.87HH287 pKa = 6.2CNNWTKK293 pKa = 10.66GRR295 pKa = 11.84QQEE298 pKa = 4.16QQEE301 pKa = 4.27QQQQQQQQQQQRR313 pKa = 11.84QHH315 pKa = 5.65NANSDD320 pKa = 3.57RR321 pKa = 11.84HH322 pKa = 4.9VQWSGVNSPINVDD335 pKa = 3.78DD336 pKa = 4.23EE337 pKa = 4.5QEE339 pKa = 4.06EE340 pKa = 4.65GQEE343 pKa = 4.1EE344 pKa = 4.25QQQQQQQQQQQVQQQPSTRR363 pKa = 11.84NCDD366 pKa = 2.92ASGPRR371 pKa = 11.84VSQEE375 pKa = 3.83SSSPRR380 pKa = 11.84PPAPLPVVVLSGNSNQVKK398 pKa = 9.37CLRR401 pKa = 11.84YY402 pKa = 9.37RR403 pKa = 11.84LYY405 pKa = 11.06KK406 pKa = 10.05KK407 pKa = 10.46FKK409 pKa = 10.47HH410 pKa = 5.86SVLDD414 pKa = 5.35ISSTWCWTSPGCPTAAKK431 pKa = 8.44ITVIFASSSQRR442 pKa = 11.84EE443 pKa = 4.16DD444 pKa = 3.39FLSKK448 pKa = 9.44VTLPKK453 pKa = 10.72GVTFALGEE461 pKa = 4.03LPYY464 pKa = 11.18

Molecular weight: 52.23 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

5

0

5

2209

140

618

441.8

49.52

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

5.794 ± 0.322

2.49 ± 0.737

5.613 ± 0.766

5.976 ± 0.877

4.346 ± 0.479

6.655 ± 0.474

1.901 ± 0.237

3.893 ± 0.769

5.93 ± 0.843

7.967 ± 0.693

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

1.856 ± 0.398

3.531 ± 0.629

6.383 ± 1.112

5.976 ± 1.536

5.115 ± 0.415

8.873 ± 1.239

6.066 ± 0.701

6.474 ± 0.201

1.584 ± 0.294

3.576 ± 0.409
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski