Streptococcus satellite phage Javan361

Taxonomy: Viruses; unclassified bacterial viruses

Average proteome isoelectric point is 6.58

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 18 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A4D5ZR17|A0A4D5ZR17_9VIRU Uncharacterized protein OS=Streptococcus satellite phage Javan361 OX=2558661 GN=JavanS361_0014 PE=4 SV=1
MM1 pKa = 7.46KK2 pKa = 10.09KK3 pKa = 10.55DD4 pKa = 3.62EE5 pKa = 4.23IKK7 pKa = 10.61KK8 pKa = 10.17YY9 pKa = 11.05LEE11 pKa = 3.9TDD13 pKa = 3.3LEE15 pKa = 4.63FNVNGRR21 pKa = 11.84GACFLSSVCVVGYY34 pKa = 10.22DD35 pKa = 4.18YY36 pKa = 11.31EE37 pKa = 4.51GQQFNTIDD45 pKa = 3.33EE46 pKa = 4.29AMEE49 pKa = 4.12AKK51 pKa = 10.69VFDD54 pKa = 4.41GKK56 pKa = 11.11SLVDD60 pKa = 2.93IWDD63 pKa = 3.46EE64 pKa = 4.12VFPQVSS70 pKa = 3.07

Molecular weight: 7.99 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A4D5ZLJ8|A0A4D5ZLJ8_9VIRU Uncharacterized protein OS=Streptococcus satellite phage Javan361 OX=2558661 GN=JavanS361_0005 PE=4 SV=1
MM1 pKa = 7.86LITSTQAKK9 pKa = 9.74AIRR12 pKa = 11.84RR13 pKa = 11.84KK14 pKa = 9.66QADD17 pKa = 3.4KK18 pKa = 11.27KK19 pKa = 10.16LTAKK23 pKa = 10.18QAGEE27 pKa = 4.41EE28 pKa = 3.96IGVTQVTYY36 pKa = 10.88RR37 pKa = 11.84KK38 pKa = 9.3IRR40 pKa = 11.84DD41 pKa = 3.51GGEE44 pKa = 4.09VKK46 pKa = 10.52PSIYY50 pKa = 9.91QKK52 pKa = 11.14AMQWLAEE59 pKa = 4.48DD60 pKa = 4.07YY61 pKa = 11.23

Molecular weight: 6.94 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

18

0

18

2547

40

484

141.5

16.54

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

5.34 ± 0.411

0.51 ± 0.104

6.125 ± 0.504

9.541 ± 0.896

4.515 ± 0.598

4.319 ± 0.268

1.61 ± 0.32

6.203 ± 0.399

11.15 ± 0.495

9.737 ± 0.609

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.316 ± 0.282

4.829 ± 0.47

2.316 ± 0.254

3.887 ± 0.481

5.065 ± 0.397

5.536 ± 0.385

6.203 ± 0.529

4.947 ± 0.401

0.942 ± 0.134

4.908 ± 0.325
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski