Streptoalloteichus hindustanus

Taxonomy: cellular organisms; Bacteria; Terrabacteria group; Actinobacteria; Actinomycetia; Pseudonocardiales; Pseudonocardiaceae; Streptoalloteichus

Average proteome isoelectric point is 6.61

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 6533 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A1M5DC79|A0A1M5DC79_STRHI Permease of the drug/metabolite transporter (DMT) superfamily OS=Streptoalloteichus hindustanus OX=2017 GN=SAMN05444320_104396 PE=4 SV=1
MM1 pKa = 7.3KK2 pKa = 10.49VAVDD6 pKa = 3.54QDD8 pKa = 3.92RR9 pKa = 11.84CCGAGACVLLAPDD22 pKa = 4.52VFDD25 pKa = 4.87QRR27 pKa = 11.84DD28 pKa = 3.49DD29 pKa = 4.21DD30 pKa = 4.5GVVVLLDD37 pKa = 3.64GQPPEE42 pKa = 4.27EE43 pKa = 3.91LHH45 pKa = 6.79ALVGEE50 pKa = 4.53AAAACPGAAISLGGTAA66 pKa = 5.06

Molecular weight: 6.56 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A1M4UCD8|A0A1M4UCD8_STRHI EspG family protein OS=Streptoalloteichus hindustanus OX=2017 GN=SAMN05444320_101370 PE=3 SV=1
MM1 pKa = 7.4GSVIKK6 pKa = 10.38KK7 pKa = 8.42RR8 pKa = 11.84RR9 pKa = 11.84KK10 pKa = 9.06RR11 pKa = 11.84MSKK14 pKa = 9.76KK15 pKa = 9.54KK16 pKa = 9.79HH17 pKa = 5.67RR18 pKa = 11.84KK19 pKa = 8.46LLRR22 pKa = 11.84KK23 pKa = 7.95TRR25 pKa = 11.84VQRR28 pKa = 11.84RR29 pKa = 11.84KK30 pKa = 9.97LKK32 pKa = 10.51KK33 pKa = 9.87

Molecular weight: 4.19 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

6533

0

6533

2076377

27

3277

317.8

34.11

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

13.661 ± 0.054

0.836 ± 0.008

5.994 ± 0.023

5.679 ± 0.031

2.659 ± 0.018

9.193 ± 0.031

2.392 ± 0.018

2.561 ± 0.019

1.546 ± 0.021

10.664 ± 0.039

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

1.572 ± 0.011

1.706 ± 0.015

6.359 ± 0.036

2.63 ± 0.018

9.081 ± 0.031

4.801 ± 0.02

5.667 ± 0.02

9.608 ± 0.033

1.601 ± 0.015

1.791 ± 0.015
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski