Odocoileus adenovirus 1

Taxonomy: Viruses; Varidnaviria; Bamfordvirae; Preplasmiviricota; Tectiliviricetes; Rowavirales; Adenoviridae; Atadenovirus; Deer atadenovirus A

Average proteome isoelectric point is 6.86

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 27 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|Q98XR5|Q98XR5_9ADEN Fiber OS=Odocoileus adenovirus 1 OX=78522 PE=3 SV=1
MM1 pKa = 7.43KK2 pKa = 10.04RR3 pKa = 11.84ARR5 pKa = 11.84WDD7 pKa = 3.19PVYY10 pKa = 10.46PFSEE14 pKa = 4.7DD15 pKa = 3.13KK16 pKa = 10.99LIPLPPFIQAGTGLEE31 pKa = 4.17SEE33 pKa = 4.66GMILSLNFTDD43 pKa = 6.32PITINPTGSLTIKK56 pKa = 9.76IGPGIEE62 pKa = 3.95INEE65 pKa = 4.21NGQLTATAQALIAEE79 pKa = 4.64SPLKK83 pKa = 10.42KK84 pKa = 10.07EE85 pKa = 3.95NYY87 pKa = 8.67ILKK90 pKa = 9.66IQTNNTLVTEE100 pKa = 4.39DD101 pKa = 4.73DD102 pKa = 3.75KK103 pKa = 11.63MGIPDD108 pKa = 4.43PLEE111 pKa = 3.99PLNIEE116 pKa = 4.21SSGQLSLNFDD126 pKa = 3.27KK127 pKa = 11.2GFQLFEE133 pKa = 4.65GKK135 pKa = 10.53LSLYY139 pKa = 10.34LDD141 pKa = 3.4NSLFIKK147 pKa = 10.61NEE149 pKa = 3.8KK150 pKa = 10.37LSLKK154 pKa = 10.41EE155 pKa = 4.12PIEE158 pKa = 3.8PLIINSQGQLNLNYY172 pKa = 10.47DD173 pKa = 3.71NSLVLQDD180 pKa = 4.6HH181 pKa = 6.62KK182 pKa = 11.44LSVPEE187 pKa = 4.05PLEE190 pKa = 4.11PLDD193 pKa = 5.31LEE195 pKa = 4.66STGQLALSINKK206 pKa = 8.81GFQISDD212 pKa = 3.03GRR214 pKa = 11.84LTLDD218 pKa = 3.43IANCFQYY225 pKa = 11.13NSNKK229 pKa = 8.7LTLTNPTTPIVIKK242 pKa = 8.73PTGEE246 pKa = 3.29ISLNIGEE253 pKa = 4.82GLTVDD258 pKa = 4.54EE259 pKa = 6.02GNLTLNTNDD268 pKa = 3.51TLQIEE273 pKa = 4.79DD274 pKa = 3.92GQITLTDD281 pKa = 3.42PMEE284 pKa = 4.47PLNLEE289 pKa = 3.9MGQLVLNVDD298 pKa = 3.55NVFKK302 pKa = 11.37VEE304 pKa = 3.84NGKK307 pKa = 10.37LGLNVNSPMSINNNNLNINLGQGLEE332 pKa = 4.09IKK334 pKa = 10.47QGALTPKK341 pKa = 9.84ISSPLIFNSSGEE353 pKa = 4.26ITTSTTQGSQIIPFDD368 pKa = 3.77AYY370 pKa = 10.4EE371 pKa = 4.73LVLMWQKK378 pKa = 10.92FLTTRR383 pKa = 11.84HH384 pKa = 6.1AIYY387 pKa = 10.58VLHH390 pKa = 6.36CTSFIPDD397 pKa = 3.63TSVDD401 pKa = 4.02TITFTPNDD409 pKa = 3.71GLKK412 pKa = 10.76AFLSTDD418 pKa = 3.28SPLFTAAFQQVGNEE432 pKa = 3.92VKK434 pKa = 10.07TIGVKK439 pKa = 10.65FSKK442 pKa = 10.57ISDD445 pKa = 3.63TEE447 pKa = 4.06VQIKK451 pKa = 8.94YY452 pKa = 10.38SQMLTTQVILSSWTATTALFVV473 pKa = 3.62

Molecular weight: 51.89 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A223PYU3|A0A223PYU3_9ADEN PVI OS=Odocoileus adenovirus 1 OX=78522 PE=4 SV=1
MM1 pKa = 7.6EE2 pKa = 5.57SMPHH6 pKa = 7.36LYY8 pKa = 9.93TLMGGATRR16 pKa = 11.84KK17 pKa = 8.93KK18 pKa = 9.79RR19 pKa = 11.84KK20 pKa = 9.4RR21 pKa = 11.84RR22 pKa = 11.84TITRR26 pKa = 11.84KK27 pKa = 9.69RR28 pKa = 11.84NPIKK32 pKa = 10.63SSNRR36 pKa = 11.84KK37 pKa = 5.99ITRR40 pKa = 11.84GTRR43 pKa = 11.84RR44 pKa = 11.84LKK46 pKa = 10.29HH47 pKa = 4.58VRR49 pKa = 11.84IPIVSQYY56 pKa = 11.54LNIHH60 pKa = 6.85PPQALNKK67 pKa = 8.33QHH69 pKa = 6.37QPLFYY74 pKa = 10.59HH75 pKa = 7.05HH76 pKa = 7.16FNQHH80 pKa = 5.29LHH82 pKa = 5.89HH83 pKa = 6.59QPNQPLVGTSYY94 pKa = 11.0PMPSTSIFIHH104 pKa = 6.88PPTINNSFTKK114 pKa = 10.41NVSLKK119 pKa = 10.07RR120 pKa = 11.84DD121 pKa = 3.66HH122 pKa = 6.94QPDD125 pKa = 4.46EE126 pKa = 4.01IQVFHH131 pKa = 7.61DD132 pKa = 4.02AQDD135 pKa = 3.14HH136 pKa = 5.61FEE138 pKa = 4.14IKK140 pKa = 9.77RR141 pKa = 11.84TDD143 pKa = 3.38GEE145 pKa = 4.07NDD147 pKa = 2.92SDD149 pKa = 4.37INAKK153 pKa = 10.15KK154 pKa = 9.98KK155 pKa = 9.58WSLEE159 pKa = 3.96DD160 pKa = 3.38VLSFLQKK167 pKa = 10.3VPHH170 pKa = 5.56QLRR173 pKa = 11.84KK174 pKa = 9.87IILTSLFGATIGLLFDD190 pKa = 5.2LLLGGPWGLTTRR202 pKa = 11.84LLRR205 pKa = 11.84LIISLVPGGNIFLTALDD222 pKa = 3.8GLGYY226 pKa = 11.03LLGKK230 pKa = 9.3SANPFNIAYY239 pKa = 10.14DD240 pKa = 3.59PDD242 pKa = 3.72FQNFGNIIQSKK253 pKa = 8.87MNDD256 pKa = 3.11RR257 pKa = 11.84LAEE260 pKa = 4.3DD261 pKa = 3.53VAKK264 pKa = 10.51AAEE267 pKa = 4.03EE268 pKa = 4.0QIGNGFMRR276 pKa = 11.84TLASLLSAAASAGTHH291 pKa = 6.24LKK293 pKa = 10.32LALPAIPIAAIRR305 pKa = 11.84PFQRR309 pKa = 4.05

Molecular weight: 34.86 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

27

0

27

9142

54

1075

338.6

38.76

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

4.857 ± 0.321

2.253 ± 0.395

4.857 ± 0.252

5.819 ± 0.326

5.568 ± 0.237

5.075 ± 0.337

2.385 ± 0.303

6.858 ± 0.416

6.629 ± 0.624

9.473 ± 0.516

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.024 ± 0.161

6.596 ± 0.338

5.021 ± 0.315

4.507 ± 0.263

4.419 ± 0.55

7.208 ± 0.301

6.257 ± 0.309

4.791 ± 0.367

1.488 ± 0.157

3.894 ± 0.301
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski