Penaeid shrimp infectious myonecrosis virus

Taxonomy: Viruses; Riboviria; Orthornavirae; Duplornaviricota; Chrymotiviricetes; Ghabrivirales; Totiviridae; unclassified Totiviridae

Average proteome isoelectric point is 7.01

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 2 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    

Protein with the lowest isoelectric point:
>tr|Q24M82|Q24M82_9VIRU Structural protein OS=Penaeid shrimp infectious myonecrosis virus OX=282786 PE=4 SV=1
MM1 pKa = 7.21HH2 pKa = 7.08VEE4 pKa = 3.79NGNIVSMEE12 pKa = 4.06NQSEE16 pKa = 4.08IDD18 pKa = 3.63SQTKK22 pKa = 9.54FFSLLEE28 pKa = 4.79DD29 pKa = 4.34DD30 pKa = 4.47NKK32 pKa = 11.16LPIVDD37 pKa = 4.26EE38 pKa = 4.4LRR40 pKa = 11.84VLADD44 pKa = 3.23MTAQRR49 pKa = 11.84SNVNTAGNHH58 pKa = 5.48LRR60 pKa = 11.84DD61 pKa = 3.88NDD63 pKa = 4.53SIRR66 pKa = 11.84ADD68 pKa = 2.92AVLANNTVRR77 pKa = 11.84NNCQIPIPVTTLIPRR92 pKa = 11.84QIRR95 pKa = 11.84GLNGVLVNQQLRR107 pKa = 11.84LQGIEE112 pKa = 3.74THH114 pKa = 6.1ITDD117 pKa = 3.87SYY119 pKa = 10.59ISKK122 pKa = 10.61AEE124 pKa = 3.81PSDD127 pKa = 3.73YY128 pKa = 11.0SKK130 pKa = 11.03QLSEE134 pKa = 4.18MVNAQKK140 pKa = 10.04TSTWRR145 pKa = 11.84ANNIASQGWDD155 pKa = 2.97MFDD158 pKa = 3.0TVQLNTNISQKK169 pKa = 10.59DD170 pKa = 3.63LSMDD174 pKa = 3.54TALTKK179 pKa = 10.93LMLLYY184 pKa = 10.68QLTTQNLPATQLPSSIYY201 pKa = 10.05SAFDD205 pKa = 3.06SRR207 pKa = 11.84TQPTLQDD214 pKa = 4.56GIWGINNGVNIFGEE228 pKa = 4.31QCGGLAAPVFPFSGGTGEE246 pKa = 4.19ITFHH250 pKa = 6.41LTLQSVPQEE259 pKa = 4.18FQEE262 pKa = 4.34SAIFVPATALQAAKK276 pKa = 10.32EE277 pKa = 4.22GARR280 pKa = 11.84TLAMYY285 pKa = 11.21VLMFAEE291 pKa = 5.25WPFGMYY297 pKa = 9.06TKK299 pKa = 10.27TKK301 pKa = 8.87QTTDD305 pKa = 2.97NAGNNQSDD313 pKa = 3.65QIFIHH318 pKa = 6.17SEE320 pKa = 4.12STVHH324 pKa = 7.25IPGQKK329 pKa = 9.48QMHH332 pKa = 6.05IVLPRR337 pKa = 11.84KK338 pKa = 10.06VNMVNPTTIAEE349 pKa = 3.98ANARR353 pKa = 11.84VVIQPTYY360 pKa = 8.63GTVAAGAGVANGNINVAAVGVALPTVNLTDD390 pKa = 4.23YY391 pKa = 10.33LVSWATDD398 pKa = 3.58FTLGDD403 pKa = 3.2IKK405 pKa = 11.06QLVEE409 pKa = 4.12RR410 pKa = 11.84MKK412 pKa = 8.68TTLPISRR419 pKa = 11.84DD420 pKa = 3.09LMAARR425 pKa = 11.84QNAMLLSTLFPPLIQSNVASDD446 pKa = 3.59TKK448 pKa = 10.45EE449 pKa = 4.03VPGTAGAYY457 pKa = 6.6TACLANLGIPEE468 pKa = 4.46TLTVNWGVDD477 pKa = 3.28INVQPLYY484 pKa = 10.78QLLEE488 pKa = 4.12TDD490 pKa = 3.11ITAHH494 pKa = 5.74NRR496 pKa = 11.84YY497 pKa = 9.11VLNLFKK503 pKa = 10.76RR504 pKa = 11.84EE505 pKa = 3.88EE506 pKa = 4.38VVAGAYY512 pKa = 8.82EE513 pKa = 4.39FGWLGHH519 pKa = 5.57MASYY523 pKa = 10.81MMGLLLTMNISSVFNVWYY541 pKa = 7.35STRR544 pKa = 11.84RR545 pKa = 11.84ISTKK549 pKa = 10.58AWDD552 pKa = 3.45TAYY555 pKa = 10.79DD556 pKa = 3.98SNIQAYY562 pKa = 10.05QDD564 pKa = 2.88MHH566 pKa = 7.63YY567 pKa = 11.24QMFSWSSMQGSIAPAMVDD585 pKa = 3.58EE586 pKa = 4.97ILHH589 pKa = 5.58NLCGQMFGFSLPLRR603 pKa = 11.84QVLFNALPITFSSFGSWMLPRR624 pKa = 11.84VSDD627 pKa = 3.79GFQTVRR633 pKa = 11.84YY634 pKa = 8.84YY635 pKa = 11.11DD636 pKa = 3.3VGPPVINAKK645 pKa = 9.98RR646 pKa = 11.84DD647 pKa = 3.57GEE649 pKa = 4.71VPVSMIDD656 pKa = 2.56AWTYY660 pKa = 11.24KK661 pKa = 9.42FTEE664 pKa = 4.27KK665 pKa = 10.51LPKK668 pKa = 10.28SFLPWPMPEE677 pKa = 4.64GKK679 pKa = 9.76DD680 pKa = 3.19STMGYY685 pKa = 10.46DD686 pKa = 3.71PEE688 pKa = 5.43KK689 pKa = 10.85EE690 pKa = 3.68PALIDD695 pKa = 3.61NSNEE699 pKa = 3.73TGNVFRR705 pKa = 11.84PFMARR710 pKa = 11.84NGNNSNYY717 pKa = 10.19LPTNYY722 pKa = 10.08TIDD725 pKa = 3.52VSQNGHH731 pKa = 6.86DD732 pKa = 3.73EE733 pKa = 4.12SCINVDD739 pKa = 4.55LFNNVAGVTLTNYY752 pKa = 10.74DD753 pKa = 3.48GTATNADD760 pKa = 3.75VVPTGSYY767 pKa = 9.59IKK769 pKa = 10.27QRR771 pKa = 11.84AMPINANAVRR781 pKa = 11.84PTEE784 pKa = 4.02TLDD787 pKa = 3.68AANHH791 pKa = 5.42TKK793 pKa = 10.33PFAIEE798 pKa = 3.96GGRR801 pKa = 11.84LVYY804 pKa = 10.78LGGTIANTTNVVNAMQRR821 pKa = 11.84KK822 pKa = 8.09QRR824 pKa = 11.84LSKK827 pKa = 10.34PAFKK831 pKa = 9.46WAHH834 pKa = 5.1AQRR837 pKa = 11.84QRR839 pKa = 11.84VYY841 pKa = 10.69DD842 pKa = 3.61SSRR845 pKa = 11.84PGMDD849 pKa = 5.52AITKK853 pKa = 9.57LCARR857 pKa = 11.84KK858 pKa = 9.99SGFMNARR865 pKa = 11.84STAMMAPKK873 pKa = 9.55TGLSAVIDD881 pKa = 3.82QAPNTSQDD889 pKa = 4.11LIEE892 pKa = 4.66QPSQQEE898 pKa = 4.18VMDD901 pKa = 3.96MQATATVV908 pKa = 3.35

Molecular weight:
100.1 kDa
Isoelectric point according different methods:






Protein with the highest isoelectric point:
>tr|Q24M82|Q24M82_9VIRU Structural protein OS=Penaeid shrimp infectious myonecrosis virus OX=282786 PE=4 SV=1
MM1 pKa = 8.18DD2 pKa = 5.69EE3 pKa = 4.04IRR5 pKa = 11.84NYY7 pKa = 8.96THH9 pKa = 7.32LDD11 pKa = 3.5YY12 pKa = 11.25IFVQNICIYY21 pKa = 9.1MLVFGIDD28 pKa = 3.4TVKK31 pKa = 10.48HH32 pKa = 5.3FRR34 pKa = 11.84QIGLFNEE41 pKa = 3.88RR42 pKa = 11.84NEE44 pKa = 4.42FIEE47 pKa = 4.16IAKK50 pKa = 9.96QLSTKK55 pKa = 9.84GKK57 pKa = 10.13RR58 pKa = 11.84FVDD61 pKa = 3.92DD62 pKa = 3.63VDD64 pKa = 3.55NMKK67 pKa = 10.77QKK69 pKa = 9.97VCEE72 pKa = 3.56IATIVGYY79 pKa = 9.39MDD81 pKa = 4.86PNVDD85 pKa = 4.06KK86 pKa = 10.56IDD88 pKa = 3.46VMEE91 pKa = 4.54EE92 pKa = 4.15VNSLAAEE99 pKa = 4.38GNEE102 pKa = 4.27HH103 pKa = 7.47GIDD106 pKa = 3.33RR107 pKa = 11.84DD108 pKa = 3.28NWNDD112 pKa = 4.33LFTKK116 pKa = 8.76TCKK119 pKa = 10.25EE120 pKa = 3.6VMTWYY125 pKa = 10.14KK126 pKa = 9.88GHH128 pKa = 6.32EE129 pKa = 4.66FISFDD134 pKa = 3.95DD135 pKa = 4.37YY136 pKa = 11.35IKK138 pKa = 11.04EE139 pKa = 4.23GMWLTSGSSSIGKK152 pKa = 7.43VHH154 pKa = 5.05WTKK157 pKa = 11.03DD158 pKa = 3.32GEE160 pKa = 4.31NGKK163 pKa = 10.2FKK165 pKa = 10.87ARR167 pKa = 11.84KK168 pKa = 9.39NMLLQIYY175 pKa = 7.67TPQEE179 pKa = 3.67LANIVYY185 pKa = 9.94AWDD188 pKa = 3.91GKK190 pKa = 9.1LHH192 pKa = 5.97SRR194 pKa = 11.84VFIKK198 pKa = 11.08NEE200 pKa = 3.64MSKK203 pKa = 10.74LRR205 pKa = 11.84LAVASNIEE213 pKa = 4.12AYY215 pKa = 9.57IHH217 pKa = 5.95EE218 pKa = 4.82SYY220 pKa = 10.8MLFLYY225 pKa = 10.2GHH227 pKa = 6.35GFKK230 pKa = 10.44EE231 pKa = 4.4YY232 pKa = 10.66FGVTLDD238 pKa = 3.99EE239 pKa = 5.7KK240 pKa = 10.82PDD242 pKa = 3.51QQHH245 pKa = 4.28QRR247 pKa = 11.84EE248 pKa = 4.02IEE250 pKa = 4.18MIEE253 pKa = 4.1KK254 pKa = 10.09LQAGYY259 pKa = 10.45FGLPFDD265 pKa = 4.37YY266 pKa = 10.95ASFDD270 pKa = 3.59HH271 pKa = 6.68QPTTFEE277 pKa = 4.0VKK279 pKa = 9.62TMVRR283 pKa = 11.84RR284 pKa = 11.84VGEE287 pKa = 4.07IVVSQVPKK295 pKa = 9.84NYY297 pKa = 10.37YY298 pKa = 9.77YY299 pKa = 9.29QTQLLVNKK307 pKa = 9.81IVNAYY312 pKa = 9.35DD313 pKa = 3.3KK314 pKa = 10.96SYY316 pKa = 11.44LSGNIKK322 pKa = 8.18NTKK325 pKa = 9.62FEE327 pKa = 4.46NIKK330 pKa = 10.73VKK332 pKa = 10.73GGVPSGVRR340 pKa = 11.84ITSLLGNMWNAIITKK355 pKa = 9.84IAINNVIGIIGYY367 pKa = 9.77DD368 pKa = 3.91PISQISLRR376 pKa = 11.84GDD378 pKa = 3.3DD379 pKa = 3.83VAILSKK385 pKa = 11.1DD386 pKa = 3.24PAALYY391 pKa = 10.44LLRR394 pKa = 11.84LSYY397 pKa = 10.88AAINAIGKK405 pKa = 9.48DD406 pKa = 3.52SKK408 pKa = 11.22LGISPKK414 pKa = 9.65VCEE417 pKa = 4.14FLRR420 pKa = 11.84NEE422 pKa = 3.75ISVTGVRR429 pKa = 11.84GWTCRR434 pKa = 11.84GIGGISQRR442 pKa = 11.84KK443 pKa = 6.88PWNPQPWSPNDD454 pKa = 3.54EE455 pKa = 4.44VEE457 pKa = 4.58TNASNISLLEE467 pKa = 3.7RR468 pKa = 11.84RR469 pKa = 11.84AGIEE473 pKa = 3.9LQQLHH478 pKa = 7.19HH479 pKa = 6.51INKK482 pKa = 8.91VKK484 pKa = 10.03WSRR487 pKa = 11.84HH488 pKa = 3.13VRR490 pKa = 11.84QSYY493 pKa = 10.22KK494 pKa = 10.6YY495 pKa = 9.98LEE497 pKa = 4.17LPKK500 pKa = 10.39RR501 pKa = 11.84LGGFGIYY508 pKa = 10.01RR509 pKa = 11.84FQGWLPNGKK518 pKa = 9.54LPLAKK523 pKa = 10.09KK524 pKa = 9.86PLVNVEE530 pKa = 5.06DD531 pKa = 3.48IHH533 pKa = 6.89PSQEE537 pKa = 3.73LFLPLSEE544 pKa = 4.11QQKK547 pKa = 10.69KK548 pKa = 9.94ILAQVEE554 pKa = 4.66MTNKK558 pKa = 8.73MQTDD562 pKa = 5.34DD563 pKa = 3.86IPGTQKK569 pKa = 10.79LFSKK573 pKa = 10.29EE574 pKa = 3.59WIQKK578 pKa = 8.87VRR580 pKa = 11.84AKK582 pKa = 10.54KK583 pKa = 10.31IIWSRR588 pKa = 11.84NQTIPIHH595 pKa = 6.05TDD597 pKa = 2.49HH598 pKa = 6.81TVRR601 pKa = 11.84IPRR604 pKa = 11.84WDD606 pKa = 3.65EE607 pKa = 3.9KK608 pKa = 11.11IKK610 pKa = 10.25FPRR613 pKa = 11.84YY614 pKa = 7.93KK615 pKa = 10.25SEE617 pKa = 4.28YY618 pKa = 9.58ILNNKK623 pKa = 8.89INLTMEE629 pKa = 4.01QVLRR633 pKa = 11.84QYY635 pKa = 11.67NLLKK639 pKa = 10.5EE640 pKa = 4.18VEE642 pKa = 4.76RR643 pKa = 11.84YY644 pKa = 10.28DD645 pKa = 5.03KK646 pKa = 10.83DD647 pKa = 3.91LKK649 pKa = 10.96VPKK652 pKa = 10.42LLDD655 pKa = 3.73ILDD658 pKa = 3.45KK659 pKa = 10.31WFPVQSSKK667 pKa = 10.81IKK669 pKa = 9.19TYY671 pKa = 10.37EE672 pKa = 3.73SQGFHH677 pKa = 5.86RR678 pKa = 11.84TDD680 pKa = 4.5AINLAVGEE688 pKa = 4.69IPTEE692 pKa = 3.83PAVKK696 pKa = 10.12INPILINFVKK706 pKa = 10.56LHH708 pKa = 6.44LEE710 pKa = 3.98RR711 pKa = 11.84QGIRR715 pKa = 11.84HH716 pKa = 4.24QRR718 pKa = 11.84GRR720 pKa = 11.84NKK722 pKa = 9.43IAKK725 pKa = 9.89FIYY728 pKa = 10.03QKK730 pKa = 9.66TKK732 pKa = 9.28QAEE735 pKa = 4.02NMILQSSLQQMYY747 pKa = 10.24RR748 pKa = 11.84YY749 pKa = 9.9

Molecular weight:
86.93 kDa
Isoelectric point according different methods:






Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

2

0

2

1657

749

908

828.5

93.51

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

6.699 ± 1.499

0.664 ± 0.002

5.069 ± 0.076

4.949 ± 0.777

3.742 ± 0.076

6.035 ± 0.016

1.992 ± 0.319

7.242 ± 1.232

5.975 ± 1.818

8.147 ± 0.076

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

3.319 ± 0.536

6.82 ± 0.475

4.647 ± 0.454

5.613 ± 0.159

4.406 ± 0.313

6.095 ± 0.442

6.518 ± 1.315

6.699 ± 0.248

1.75 ± 0.148

3.621 ± 0.46

Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski