Capybara microvirus Cap3_SP_481

Taxonomy: Viruses; Monodnaviria; Sangervirae; Phixviricota; Malgrandaviricetes; Petitvirales; Microviridae; unclassified Microviridae

Average proteome isoelectric point is 5.71

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 5 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A4P8W8R9|A0A4P8W8R9_9VIRU Nonstructural protein OS=Capybara microvirus Cap3_SP_481 OX=2585469 PE=4 SV=1
MM1 pKa = 7.55KK2 pKa = 10.28FYY4 pKa = 10.04TAYY7 pKa = 10.32NRR9 pKa = 11.84PASEE13 pKa = 3.91PTEE16 pKa = 4.36IGSSIYY22 pKa = 9.94PIYY25 pKa = 10.14EE26 pKa = 3.4PRR28 pKa = 11.84IDD30 pKa = 3.58KK31 pKa = 9.23KK32 pKa = 9.16TGRR35 pKa = 11.84KK36 pKa = 8.86ILIKK40 pKa = 10.7VGEE43 pKa = 4.02EE44 pKa = 3.58DD45 pKa = 4.02LYY47 pKa = 11.68EE48 pKa = 4.82KK49 pKa = 10.33IQEE52 pKa = 4.29SLEE55 pKa = 3.97GTKK58 pKa = 9.82IEE60 pKa = 4.42NIVRR64 pKa = 11.84RR65 pKa = 11.84VTLGDD70 pKa = 3.43PTALEE75 pKa = 3.96QRR77 pKa = 11.84IGQYY81 pKa = 11.02LDD83 pKa = 3.37LTEE86 pKa = 4.24MPEE89 pKa = 4.26NLMAAQNFILKK100 pKa = 10.53AEE102 pKa = 4.31AEE104 pKa = 4.27FEE106 pKa = 4.17KK107 pKa = 11.04LPLEE111 pKa = 3.86IRR113 pKa = 11.84KK114 pKa = 8.81EE115 pKa = 4.11FNYY118 pKa = 9.43STEE121 pKa = 4.46EE122 pKa = 3.92YY123 pKa = 9.65VSAYY127 pKa = 10.2GSEE130 pKa = 3.72EE131 pKa = 3.55WANRR135 pKa = 11.84VGLTKK140 pKa = 10.39VQEE143 pKa = 4.47EE144 pKa = 4.26IKK146 pKa = 10.49EE147 pKa = 4.01AATGVTADD155 pKa = 4.02DD156 pKa = 4.01QRR158 pKa = 11.84NEE160 pKa = 3.71

Molecular weight: 18.38 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A4P8W6B1|A0A4P8W6B1_9VIRU Minor capsid protein OS=Capybara microvirus Cap3_SP_481 OX=2585469 PE=4 SV=1
MM1 pKa = 7.55ACSSPLTGIIDD12 pKa = 3.73QKK14 pKa = 11.47GKK16 pKa = 8.66ITFEE20 pKa = 4.2SIQLKK25 pKa = 10.46DD26 pKa = 3.36GEE28 pKa = 4.72SIKK31 pKa = 10.28EE32 pKa = 3.73RR33 pKa = 11.84KK34 pKa = 8.67QRR36 pKa = 11.84LEE38 pKa = 3.49NSGYY42 pKa = 9.02ISKK45 pKa = 10.36IIQIPCRR52 pKa = 11.84RR53 pKa = 11.84CMGCRR58 pKa = 11.84LDD60 pKa = 4.9YY61 pKa = 11.08AKK63 pKa = 10.65EE64 pKa = 3.52WANRR68 pKa = 11.84LTLEE72 pKa = 4.53TKK74 pKa = 9.91TSEE77 pKa = 3.75NNYY80 pKa = 10.09FITLTYY86 pKa = 10.55DD87 pKa = 3.42DD88 pKa = 4.41NNIPIRR94 pKa = 11.84EE95 pKa = 4.11NKK97 pKa = 10.51GEE99 pKa = 4.29FISFPLNKK107 pKa = 9.4KK108 pKa = 9.56DD109 pKa = 5.36AQDD112 pKa = 2.8FWKK115 pKa = 10.18RR116 pKa = 11.84VRR118 pKa = 11.84AKK120 pKa = 10.69YY121 pKa = 9.81PEE123 pKa = 3.76PHH125 pKa = 6.31IKK127 pKa = 10.66YY128 pKa = 9.61FMCGEE133 pKa = 4.17YY134 pKa = 10.86GEE136 pKa = 4.53EE137 pKa = 3.89TGRR140 pKa = 11.84PHH142 pKa = 5.31YY143 pKa = 10.24HH144 pKa = 6.75AIIYY148 pKa = 7.29NAPWLNDD155 pKa = 3.12LKK157 pKa = 11.04YY158 pKa = 10.92YY159 pKa = 10.54KK160 pKa = 10.73NNEE163 pKa = 3.66FGDD166 pKa = 4.03ALFHH170 pKa = 7.68SEE172 pKa = 4.82ILNKK176 pKa = 10.31LWGKK180 pKa = 11.13GDD182 pKa = 3.6TTVGDD187 pKa = 4.0VTWNSSSYY195 pKa = 7.73VARR198 pKa = 11.84YY199 pKa = 6.88ITKK202 pKa = 9.77KK203 pKa = 10.58QYY205 pKa = 9.87GDD207 pKa = 3.29KK208 pKa = 10.82AAEE211 pKa = 4.21HH212 pKa = 6.39YY213 pKa = 9.13EE214 pKa = 3.98NLGLEE219 pKa = 4.38PEE221 pKa = 4.41FVTMSLKK228 pKa = 10.72PMIGQEE234 pKa = 4.14YY235 pKa = 9.04YY236 pKa = 10.39DD237 pKa = 3.35QHH239 pKa = 8.46KK240 pKa = 9.26EE241 pKa = 3.69QIYY244 pKa = 9.98KK245 pKa = 10.3NDD247 pKa = 4.11YY248 pKa = 10.18IWINCKK254 pKa = 10.81GEE256 pKa = 4.21TIKK259 pKa = 10.64IKK261 pKa = 10.31PPRR264 pKa = 11.84IYY266 pKa = 10.4DD267 pKa = 3.7LKK269 pKa = 11.32YY270 pKa = 10.16EE271 pKa = 4.12IEE273 pKa = 4.1NPEE276 pKa = 3.72RR277 pKa = 11.84MKK279 pKa = 10.5EE280 pKa = 3.81IKK282 pKa = 9.89LQRR285 pKa = 11.84QLRR288 pKa = 11.84QEE290 pKa = 3.84AATAEE295 pKa = 4.43IINNTGYY302 pKa = 10.3IDD304 pKa = 3.98GAQMQRR310 pKa = 11.84EE311 pKa = 4.36IKK313 pKa = 10.49ARR315 pKa = 11.84ALDD318 pKa = 3.59ARR320 pKa = 11.84TANLKK325 pKa = 8.91RR326 pKa = 11.84TII328 pKa = 3.82

Molecular weight: 38.51 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

5

0

5

1379

78

580

275.8

31.35

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

7.759 ± 1.103

0.725 ± 0.366

4.496 ± 0.34

8.484 ± 1.682

3.481 ± 1.044

7.179 ± 0.916

1.378 ± 0.385

7.179 ± 1.261

6.599 ± 1.253

5.729 ± 0.418

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

3.191 ± 0.471

6.526 ± 1.147

4.206 ± 0.923

4.641 ± 0.376

4.206 ± 0.71

6.164 ± 1.601

7.179 ± 0.653

3.191 ± 0.649

2.03 ± 0.412

5.656 ± 0.455
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski