Zhejiang mosquito virus 3
Average proteome isoelectric point is 9.28
Get precalculated fractions of proteins
Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
All
Note: above files contain also dissociation constants (pKa)
Virtual 2D-PAGE plot for 2 proteins (isoelectric point calculated using IPC2_protein)
Get csv file with sequences according to given criteria:
* You can choose from 21 different methods for calculating isoelectric point
Summary statistics related to proteome-wise predictions
Protein with the lowest isoelectric point:
>tr|A0A1L3KIH6|A0A1L3KIH6_9VIRU RNA-dependent RNA polymerase OS=Zhejiang mosquito virus 3 OX=1923779 PE=4 SV=1
MM1 pKa = 7.56 SLPEE5 pKa = 4.41 GVSGAIPPRR14 pKa = 11.84 TPAGSHH20 pKa = 5.85 EE21 pKa = 4.2 PASAQVGRR29 pKa = 11.84 PQPSPKK35 pKa = 10.42 GLARR39 pKa = 11.84 KK40 pKa = 7.42 TNHH43 pKa = 5.01 TQIPPTIVDD52 pKa = 3.8 PKK54 pKa = 9.39 SSPRR58 pKa = 11.84 RR59 pKa = 11.84 AHH61 pKa = 6.22 PPKK64 pKa = 10.16 KK65 pKa = 10.24 ARR67 pKa = 11.84 APGKK71 pKa = 9.48 ATTKK75 pKa = 10.29 PPASVQQKK83 pKa = 8.09 QAQHH87 pKa = 5.34 IWDD90 pKa = 4.33 AFRR93 pKa = 11.84 LSLWVLLPRR102 pKa = 11.84 LQKK105 pKa = 10.59 RR106 pKa = 11.84 GLSTKK111 pKa = 10.4 AVATIEE117 pKa = 4.54 AIKK120 pKa = 10.6 ALYY123 pKa = 9.32 GWIGNSVACSGVEE136 pKa = 4.15 FTAKK140 pKa = 9.37 QVKK143 pKa = 9.77 EE144 pKa = 3.73 YY145 pKa = 11.33 ANYY148 pKa = 9.83 CRR150 pKa = 11.84 ARR152 pKa = 11.84 ALRR155 pKa = 11.84 AQQCEE160 pKa = 4.17 PPRR163 pKa = 11.84 GFPIRR168 pKa = 11.84 AFEE171 pKa = 3.99 RR172 pKa = 11.84 GYY174 pKa = 9.62 IHH176 pKa = 7.62 AMLACPGQGRR186 pKa = 11.84 LHH188 pKa = 7.02 LAQLARR194 pKa = 11.84 VGRR197 pKa = 11.84 AMPIGTTKK205 pKa = 10.54 VAIASLRR212 pKa = 11.84 KK213 pKa = 9.2 HH214 pKa = 6.5 RR215 pKa = 11.84 EE216 pKa = 3.87 VLSQPMDD223 pKa = 3.56 TEE225 pKa = 4.03 PALVEE230 pKa = 4.34 KK231 pKa = 10.5 LRR233 pKa = 11.84 AWAEE237 pKa = 3.13 IWTRR241 pKa = 11.84 EE242 pKa = 3.8 RR243 pKa = 11.84 LGAGGRR249 pKa = 11.84 TLTNPAAHH257 pKa = 7.09 FSRR260 pKa = 11.84 SASATVSALKK270 pKa = 10.56 GGQLTEE276 pKa = 4.2 LRR278 pKa = 11.84 QLPAVAEE285 pKa = 4.55 HH286 pKa = 6.35 YY287 pKa = 11.31 ALIQEE292 pKa = 4.54 LLGDD296 pKa = 3.71 QLDD299 pKa = 4.28 PVTGEE304 pKa = 3.77 PFEE307 pKa = 4.31 WDD309 pKa = 4.09 PYY311 pKa = 10.85 TFDD314 pKa = 4.73 ADD316 pKa = 3.42 GGAIGLLTSASEE328 pKa = 4.23 ADD330 pKa = 4.14 DD331 pKa = 4.02 LQILADD337 pKa = 3.86 CALRR341 pKa = 11.84 TATEE345 pKa = 3.98 HH346 pKa = 6.92 AADD349 pKa = 3.8 NTPIPMTATVISEE362 pKa = 4.53 LGMKK366 pKa = 10.1 ARR368 pKa = 11.84 VVTKK372 pKa = 9.07 PPAWAVVAGDD382 pKa = 3.96 ACRR385 pKa = 11.84 KK386 pKa = 6.81 TVWPLLEE393 pKa = 3.99 GDD395 pKa = 3.89 RR396 pKa = 11.84 RR397 pKa = 11.84 IDD399 pKa = 3.47 LSGVRR404 pKa = 11.84 PTAEE408 pKa = 3.82 VLDD411 pKa = 4.38 AFHH414 pKa = 7.74 DD415 pKa = 4.06 NLAHH419 pKa = 6.07 SLVGARR425 pKa = 11.84 STQFYY430 pKa = 10.74 SADD433 pKa = 3.23 LTAATDD439 pKa = 3.74 LMPFDD444 pKa = 4.63 VSRR447 pKa = 11.84 AMWNGLCDD455 pKa = 4.0 GLGATATAPLRR466 pKa = 11.84 KK467 pKa = 9.69 LGLYY471 pKa = 10.56 LLGPVQVSYY480 pKa = 11.04 PDD482 pKa = 4.74 LSALPASSKK491 pKa = 10.81 LYY493 pKa = 9.48 VAGEE497 pKa = 4.05 RR498 pKa = 11.84 VEE500 pKa = 4.35 CLSEE504 pKa = 4.13 RR505 pKa = 11.84 GCMMGLPVSWTVLNLYY521 pKa = 9.38 NLAMADD527 pKa = 4.13 LACTPEE533 pKa = 4.27 GSPVLVNVAPAIARR547 pKa = 11.84 GDD549 pKa = 3.93 DD550 pKa = 3.6 LVAAIPAEE558 pKa = 3.95 EE559 pKa = 3.91 ATRR562 pKa = 11.84 YY563 pKa = 9.44 EE564 pKa = 4.31 DD565 pKa = 5.69 LIAATGGEE573 pKa = 4.2 ANRR576 pKa = 11.84 LKK578 pKa = 10.73 SFRR581 pKa = 11.84 SADD584 pKa = 3.21 AFVLAEE590 pKa = 3.95 RR591 pKa = 11.84 TFEE594 pKa = 4.14 VGVLRR599 pKa = 11.84 RR600 pKa = 11.84 PNVEE604 pKa = 3.79 LKK606 pKa = 10.11 QRR608 pKa = 11.84 GYY610 pKa = 7.25 VTRR613 pKa = 11.84 RR614 pKa = 11.84 TYY616 pKa = 9.54 RR617 pKa = 11.84 TAPLLAQFDD626 pKa = 4.21 SAEE629 pKa = 4.12 LHH631 pKa = 6.53 GGTGDD636 pKa = 3.44 TRR638 pKa = 11.84 RR639 pKa = 11.84 LGDD642 pKa = 3.63 APEE645 pKa = 4.13 VVAIRR650 pKa = 11.84 MACDD654 pKa = 3.28 VPIRR658 pKa = 11.84 SLLGGGPRR666 pKa = 11.84 TVGANPVPDD675 pKa = 3.85 YY676 pKa = 11.6 VSIPPAAAACLAEE689 pKa = 4.31 FEE691 pKa = 4.39 GTRR694 pKa = 11.84 LYY696 pKa = 10.93 RR697 pKa = 11.84 SVAEE701 pKa = 4.32 GLMSVHH707 pKa = 6.84 RR708 pKa = 11.84 GLVADD713 pKa = 5.04 LRR715 pKa = 11.84 RR716 pKa = 11.84 SAIPLFYY723 pKa = 10.24 PRR725 pKa = 11.84 EE726 pKa = 3.96 LGGAGFPHH734 pKa = 7.16 PKK736 pKa = 9.88 GFAAAVASAGEE747 pKa = 4.34 LGLKK751 pKa = 10.04 RR752 pKa = 11.84 AGLALTTAGHH762 pKa = 6.98 KK763 pKa = 9.96 AQQKK767 pKa = 10.19 VGLLSCPWSPKK778 pKa = 8.69 LTDD781 pKa = 3.32 RR782 pKa = 11.84 RR783 pKa = 11.84 AKK785 pKa = 8.87 EE786 pKa = 3.49 ARR788 pKa = 11.84 RR789 pKa = 11.84 RR790 pKa = 11.84 LIASDD795 pKa = 3.06 QRR797 pKa = 11.84 AWANSVLARR806 pKa = 11.84 HH807 pKa = 6.69 PDD809 pKa = 3.43 LPRR812 pKa = 11.84 GGSAWTNRR820 pKa = 11.84 AAGEE824 pKa = 3.96 LRR826 pKa = 11.84 KK827 pKa = 9.92 ALSVPSRR834 pKa = 11.84 GFEE837 pKa = 4.05 TVPRR841 pKa = 11.84 GARR844 pKa = 11.84 VAVALEE850 pKa = 3.95 DD851 pKa = 3.55 AVIRR855 pKa = 11.84 EE856 pKa = 4.25 VAAAAAWEE864 pKa = 4.17 DD865 pKa = 3.68 AFLGPGARR873 pKa = 11.84 GWSGVPPPMQEE884 pKa = 3.84 PSRR887 pKa = 11.84 KK888 pKa = 8.92 RR889 pKa = 11.84 SARR892 pKa = 11.84 QKK894 pKa = 10.16 EE895 pKa = 4.53 EE896 pKa = 4.0 SLGMYY901 pKa = 9.55 PSLGEE906 pKa = 3.6 VARR909 pKa = 11.84 RR910 pKa = 11.84 LKK912 pKa = 9.94 TIRR915 pKa = 11.84 SQTQAARR922 pKa = 11.84 FNRR925 pKa = 11.84 TFLPKK930 pKa = 10.12 RR931 pKa = 11.84 AVQEE935 pKa = 3.67 RR936 pKa = 11.84 ARR938 pKa = 11.84 FFDD941 pKa = 3.31 RR942 pKa = 11.84 LKK944 pKa = 10.88 ALRR947 pKa = 11.84 EE948 pKa = 4.18 LEE950 pKa = 4.41 TVLVPAQAAGARR962 pKa = 11.84 LVVFDD967 pKa = 4.72 PVTHH971 pKa = 6.48 RR972 pKa = 11.84 VSEE975 pKa = 4.38 SAGEE979 pKa = 3.83 IDD981 pKa = 3.83 GGEE984 pKa = 3.89 GRR986 pKa = 11.84 MGFPLWRR993 pKa = 11.84 HH994 pKa = 5.12 TLQEE998 pKa = 4.24 RR999 pKa = 11.84 KK1000 pKa = 9.64 GKK1002 pKa = 10.4 RR1003 pKa = 11.84 GAQGQEE1009 pKa = 3.55 AAVPVPVATTRR1020 pKa = 11.84 SGLSLGDD1027 pKa = 3.37 VMTVRR1032 pKa = 11.84 RR1033 pKa = 11.84 LPRR1036 pKa = 11.84 RR1037 pKa = 11.84 PRR1039 pKa = 11.84 GVRR1042 pKa = 11.84 RR1043 pKa = 11.84 LPNRR1047 pKa = 11.84 SGAHH1051 pKa = 4.99 SRR1053 pKa = 11.84 NVRR1056 pKa = 3.24
Molecular weight: 113.82 kDa
Isoelectric point according different methods:
IPC2.protein.svr19 9.26
IPC2_protein 9.253
IPC_protein 9.502
Toseland 10.175
ProMoST 9.882
Dawson 10.335
Bjellqvist 10.028
Wikipedia 10.511
Rodwell 10.584
Grimsley 10.394
Solomon 10.394
Lehninger 10.35
Nozaki 10.218
DTASelect 10.014
Thurlkill 10.218
EMBOSS 10.584
Sillero 10.262
Patrickios 10.16
IPC_peptide 10.394
IPC2_peptide 8.916
IPC2.peptide.svr19 8.301
Protein with the highest isoelectric point:
>tr|A0A1L3KIH6|A0A1L3KIH6_9VIRU RNA-dependent RNA polymerase OS=Zhejiang mosquito virus 3 OX=1923779 PE=4 SV=1
MM1 pKa = 7.54 GATSVGQPSNSPRR14 pKa = 11.84 SPWQSSDD21 pKa = 2.89 RR22 pKa = 11.84 HH23 pKa = 5.88 DD24 pKa = 3.7 VPKK27 pKa = 11.2 GEE29 pKa = 4.33 TGPGRR34 pKa = 11.84 SDD36 pKa = 3.39 RR37 pKa = 11.84 DD38 pKa = 3.16 RR39 pKa = 11.84 HH40 pKa = 6.18 SRR42 pKa = 11.84 LLTLGTPLPFPLLQRR57 pKa = 11.84 MPPEE61 pKa = 4.83 RR62 pKa = 11.84 EE63 pKa = 3.96 SHH65 pKa = 6.4 SPFPTIDD72 pKa = 3.14 LPGRR76 pKa = 11.84 LRR78 pKa = 11.84 NPMGDD83 pKa = 3.12 GVEE86 pKa = 4.14 NDD88 pKa = 3.28 QTRR91 pKa = 11.84 PRR93 pKa = 11.84 SLCGDD98 pKa = 3.36 QHH100 pKa = 7.33 SLQLSEE106 pKa = 3.94 GLKK109 pKa = 9.83 TIEE112 pKa = 3.87 EE113 pKa = 4.5 AGSFLHH119 pKa = 7.15 RR120 pKa = 11.84 PFGQEE125 pKa = 3.41 GAVEE129 pKa = 4.02 PRR131 pKa = 11.84 RR132 pKa = 11.84 LSLRR136 pKa = 11.84 PNRR139 pKa = 11.84 LKK141 pKa = 10.78 SPRR144 pKa = 11.84 HH145 pKa = 4.33 FPEE148 pKa = 4.4 RR149 pKa = 11.84 RR150 pKa = 11.84 VHH152 pKa = 5.29 PQRR155 pKa = 11.84 LLLLAGRR162 pKa = 11.84 ALARR166 pKa = 11.84 RR167 pKa = 11.84 LLHH170 pKa = 5.55 WRR172 pKa = 11.84 RR173 pKa = 11.84 NSRR176 pKa = 11.84 PASSTWAKK184 pKa = 10.46 EE185 pKa = 3.98 GVFPGGRR192 pKa = 11.84 RR193 pKa = 11.84 RR194 pKa = 11.84 DD195 pKa = 3.77 FADD198 pKa = 3.07 HH199 pKa = 6.83 GVFEE203 pKa = 5.13 RR204 pKa = 11.84 NGDD207 pKa = 3.48 TGTAGHH213 pKa = 6.89 RR214 pKa = 11.84 LEE216 pKa = 4.31 SPRR219 pKa = 11.84 GNGQCLTQLPSCPVRR234 pKa = 11.84 PCRR237 pKa = 11.84 PSTRR241 pKa = 11.84 EE242 pKa = 3.67 VGVAGQDD249 pKa = 2.99 RR250 pKa = 11.84 VRR252 pKa = 11.84 PRR254 pKa = 11.84 SLIRR258 pKa = 11.84 RR259 pKa = 11.84 DD260 pKa = 3.16 KK261 pKa = 10.58 SAAGLFCSAVSEE273 pKa = 4.7 FWGPWTRR280 pKa = 11.84 KK281 pKa = 8.74 EE282 pKa = 4.01 SHH284 pKa = 6.95 LLLCLVAGCRR294 pKa = 11.84 QSQARR299 pKa = 11.84 ALKK302 pKa = 10.68 AKK304 pKa = 7.52 LTCRR308 pKa = 11.84 GDD310 pKa = 3.57 CRR312 pKa = 11.84 RR313 pKa = 11.84 EE314 pKa = 3.65 PLGVRR319 pKa = 11.84 EE320 pKa = 3.96 TRR322 pKa = 11.84 APQFSGVEE330 pKa = 3.9 QRR332 pKa = 11.84 YY333 pKa = 9.52 SRR335 pKa = 11.84 TPEE338 pKa = 3.72 VRR340 pKa = 11.84 NKK342 pKa = 10.09 TPVNGHH348 pKa = 5.36 QSLGHH353 pKa = 5.92 GAVEE357 pKa = 4.3 PGSLEE362 pKa = 4.1 LGQARR367 pKa = 11.84 CSSRR371 pKa = 11.84 RR372 pKa = 11.84 YY373 pKa = 10.52 GDD375 pKa = 4.07 IIWNRR380 pKa = 11.84 VGTDD384 pKa = 3.55 GAGTPAKK391 pKa = 10.17 EE392 pKa = 3.98 GANRR396 pKa = 11.84 NVAGHH401 pKa = 7.03 ANGHH405 pKa = 5.29 DD406 pKa = 3.51 LRR408 pKa = 11.84 RR409 pKa = 11.84 ISEE412 pKa = 4.16 AASVPSAAVEE422 pKa = 4.39 FGAIEE427 pKa = 4.06 LSKK430 pKa = 10.5 QGRR433 pKa = 11.84 RR434 pKa = 11.84 TVSTTSYY441 pKa = 10.37 IAPLLQLDD449 pKa = 3.43 IRR451 pKa = 11.84 TTKK454 pKa = 10.28 HH455 pKa = 6.1 SYY457 pKa = 11.21 LEE459 pKa = 4.78 GPLSQYY465 pKa = 10.88 KK466 pKa = 10.34 GIRR469 pKa = 11.84 APEE472 pKa = 4.06 ALEE475 pKa = 4.67 AVGLPTGCSDD485 pKa = 3.76 KK486 pKa = 11.16 VFVPSRR492 pKa = 11.84 LLGRR496 pKa = 11.84 DD497 pKa = 2.97 SRR499 pKa = 11.84 HH500 pKa = 4.91 EE501 pKa = 4.39 VIASSYY507 pKa = 10.06 RR508 pKa = 11.84 GRR510 pKa = 11.84 HH511 pKa = 4.29 VDD513 pKa = 2.95 QHH515 pKa = 6.05 RR516 pKa = 11.84 RR517 pKa = 11.84 TLRR520 pKa = 11.84 GTRR523 pKa = 11.84 QVSHH527 pKa = 6.3 CQVVQVEE534 pKa = 4.05 HH535 pKa = 7.03 RR536 pKa = 11.84 PRR538 pKa = 11.84 DD539 pKa = 3.55 RR540 pKa = 11.84 KK541 pKa = 10.12 AHH543 pKa = 5.49 HH544 pKa = 6.05 TTPFAQALDD553 pKa = 3.64 AFPRR557 pKa = 11.84 NVQLGARR564 pKa = 11.84 RR565 pKa = 11.84 QGTQVRR571 pKa = 11.84 VRR573 pKa = 11.84 DD574 pKa = 3.74 LDD576 pKa = 3.47 RR577 pKa = 11.84 AEE579 pKa = 4.06 QVEE582 pKa = 4.42 SEE584 pKa = 4.24 LTQGGGRR591 pKa = 11.84 SRR593 pKa = 11.84 TQSVAEE599 pKa = 4.52 TIPHH603 pKa = 6.29 RR604 pKa = 11.84 PAHH607 pKa = 5.03 VEE609 pKa = 3.66 RR610 pKa = 11.84 HH611 pKa = 4.44 EE612 pKa = 3.92 VRR614 pKa = 11.84 GGGKK618 pKa = 9.16 VCAVEE623 pKa = 4.91 LGGTSTNEE631 pKa = 3.62 GVGQVVVEE639 pKa = 4.59 GIEE642 pKa = 5.07 DD643 pKa = 3.63 LGSWADD649 pKa = 3.57 SRR651 pKa = 11.84 QVDD654 pKa = 3.54 PTVPFEE660 pKa = 4.58 KK661 pKa = 10.85 GPDD664 pKa = 3.7 GLPTGVSGHH673 pKa = 6.33 HH674 pKa = 6.13 CPGRR678 pKa = 11.84 RR679 pKa = 11.84 LRR681 pKa = 11.84 HH682 pKa = 6.37 DD683 pKa = 3.85 PRR685 pKa = 11.84 LHH687 pKa = 4.94 TQLRR691 pKa = 11.84 NDD693 pKa = 3.8 CCGHH697 pKa = 6.32 RR698 pKa = 11.84 NRR700 pKa = 11.84 GIVGRR705 pKa = 11.84 MFGCSTEE712 pKa = 4.09 SAVRR716 pKa = 11.84 KK717 pKa = 9.55 DD718 pKa = 3.47 LQVVRR723 pKa = 11.84 FGRR726 pKa = 11.84 RR727 pKa = 11.84 GQQAYY732 pKa = 9.18 GAAVCIEE739 pKa = 4.2 RR740 pKa = 11.84 VRR742 pKa = 11.84 VPLEE746 pKa = 3.12 WLARR750 pKa = 11.84 HH751 pKa = 5.29 RR752 pKa = 11.84 VEE754 pKa = 6.0 LVAEE758 pKa = 4.02 QLLDD762 pKa = 3.48 EE763 pKa = 4.53 RR764 pKa = 11.84 VVFGHH769 pKa = 6.23 RR770 pKa = 11.84 WEE772 pKa = 4.12 LTKK775 pKa = 10.67 LRR777 pKa = 11.84 KK778 pKa = 9.02 LAALQRR784 pKa = 11.84 AHH786 pKa = 7.42 RR787 pKa = 11.84 CRR789 pKa = 11.84 SRR791 pKa = 11.84 PGEE794 pKa = 4.07 VCSGIRR800 pKa = 11.84 KK801 pKa = 9.41 SPAARR806 pKa = 11.84 SQSLPGPDD814 pKa = 3.33 FRR816 pKa = 11.84 PRR818 pKa = 11.84 SEE820 pKa = 4.22 LLNEE824 pKa = 3.97 RR825 pKa = 11.84 GFRR828 pKa = 11.84 VHH830 pKa = 6.85 WLGQHH835 pKa = 6.65 LPVLSKK841 pKa = 11.17 ASDD844 pKa = 3.77 GNFCRR849 pKa = 11.84 ADD851 pKa = 3.63 RR852 pKa = 11.84 HH853 pKa = 6.28 CPPDD857 pKa = 3.51 SCEE860 pKa = 4.09 LGEE863 pKa = 4.66 VKK865 pKa = 9.06 PTLPRR870 pKa = 11.84 TGQHH874 pKa = 5.86 SVDD877 pKa = 3.05 ISTLEE882 pKa = 4.22 GPNGEE887 pKa = 4.03 AARR890 pKa = 11.84 RR891 pKa = 11.84 LTLLSPQRR899 pKa = 11.84 AGTAIVGVLLDD910 pKa = 3.89 LLGGKK915 pKa = 9.65 FDD917 pKa = 3.5 ATAGHH922 pKa = 6.19 GVSYY926 pKa = 9.46 PAIEE930 pKa = 4.09 SLNRR934 pKa = 11.84 FNSGYY939 pKa = 9.98 CFRR942 pKa = 11.84 RR943 pKa = 11.84 QAALLKK949 pKa = 10.28 AWQQYY954 pKa = 6.24 PQRR957 pKa = 11.84 KK958 pKa = 9.29 AEE960 pKa = 4.04 GVPDD964 pKa = 3.78 VLRR967 pKa = 11.84 LLLLNRR973 pKa = 11.84 GRR975 pKa = 11.84 GFGRR979 pKa = 11.84 CLSRR983 pKa = 11.84 SARR986 pKa = 11.84 LLRR989 pKa = 11.84 RR990 pKa = 11.84 VRR992 pKa = 11.84 STRR995 pKa = 11.84 RR996 pKa = 11.84 GLGVHH1001 pKa = 7.29 DD1002 pKa = 4.54 GGGDD1006 pKa = 3.51 LGVVGLPGQPFRR1018 pKa = 11.84 TGLRR1022 pKa = 11.84 PTNLGTGGLVRR1033 pKa = 11.84 ACRR1036 pKa = 11.84 CPGRR1040 pKa = 11.84 YY1041 pKa = 9.41 GSAHH1045 pKa = 6.08 SFRR1048 pKa = 11.84 KK1049 pKa = 6.73 THH1051 pKa = 5.23 YY1052 pKa = 9.96 RR1053 pKa = 11.84 RR1054 pKa = 3.56
Molecular weight: 116.49 kDa
Isoelectric point according different methods:
IPC2.protein.svr19 9.298
IPC2_protein 9.545
IPC_protein 10.76
Toseland 10.921
ProMoST 11.169
Dawson 10.965
Bjellqvist 10.833
Wikipedia 11.316
Rodwell 10.877
Grimsley 11.008
Solomon 11.301
Lehninger 11.228
Nozaki 10.935
DTASelect 10.833
Thurlkill 10.921
EMBOSS 11.374
Sillero 10.935
Patrickios 10.555
IPC_peptide 11.301
IPC2_peptide 10.292
IPC2.peptide.svr19 9.151
Peptides (in silico digests for buttom-up proteomics)
Below you can find
in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.
Try ESI
ChTry ESI
ArgC ESI
LysN ESI
TryLysC ESI
Try MALDI
ChTry MALDI
ArgC MALDI
LysN MALDI
TryLysC MALDI
Try LTQ
ChTry LTQ
ArgC LTQ
LysN LTQ
TryLysC LTQ
Try MSlow
ChTry MSlow
ArgC MSlow
LysN MSlow
TryLysC MSlow
Try MShigh
ChTry MShigh
ArgC MShigh
LysN MShigh
TryLysC MShigh
General Statistics
Number of major isoforms
Number of additional isoforms
Number of all proteins
Number of amino acids
Min. Seq. Length
Max. Seq. Length
Avg. Seq. Length
Avg. Mol. Weight
2
0
2
2110
1054
1056
1055.0
115.15
Amino acid frequency
Ala
Cys
Asp
Glu
Phe
Gly
His
Ile
Lys
Leu
10.569 ± 2.541
1.896 ± 0.465
4.028 ± 0.036
5.498 ± 0.004
2.559 ± 0.068
9.668 ± 0.867
2.938 ± 0.73
2.275 ± 0.329
3.081 ± 0.362
9.953 ± 0.126
Met
Asn
Gln
Pro
Arg
Ser
Thr
Val
Trp
Tyr
0.995 ± 0.429
1.991 ± 0.2
7.251 ± 0.227
3.934 ± 0.433
11.848 ± 1.331
6.54 ± 0.534
5.213 ± 0.261
7.062 ± 0.028
1.28 ± 0.165
1.422 ± 0.198
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level
Most of the basic statistics you can see at this page can be downloaded from this CSV file
For dipeptide frequency statistics click here