Aequorivita sp. H23M31

Taxonomy: cellular organisms; Bacteria; FCB group; Bacteroidetes/Chlorobi group; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Aequorivita; unclassified Aequorivita

Average proteome isoelectric point is 6.43

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 3051 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A410FZF5|A0A410FZF5_9FLAO Uncharacterized protein OS=Aequorivita sp. H23M31 OX=2494375 GN=EI546_01105 PE=4 SV=1
MM1 pKa = 7.46KK2 pKa = 10.32KK3 pKa = 8.41ITLIMFALATSFVFAQSATNAEE25 pKa = 4.7SILSQTSGAIGDD37 pKa = 4.09GGVACGDD44 pKa = 3.46QGAGTTGDD52 pKa = 3.27NLYY55 pKa = 10.48FRR57 pKa = 11.84SYY59 pKa = 10.6YY60 pKa = 10.57LYY62 pKa = 10.26DD63 pKa = 3.35YY64 pKa = 10.1GVRR67 pKa = 11.84GIVQATGLEE76 pKa = 4.53FFVSTATGSTALQVMVFDD94 pKa = 4.46MEE96 pKa = 4.38GFPGGFDD103 pKa = 3.45ATNMPVPLASASLTVTSAQVGTMVRR128 pKa = 11.84ADD130 pKa = 3.8FDD132 pKa = 3.89SPAIVDD138 pKa = 3.58EE139 pKa = 4.3DD140 pKa = 4.06TTLVALVYY148 pKa = 8.9EE149 pKa = 4.63TDD151 pKa = 3.29GQTAQFYY158 pKa = 10.35LGTAAAEE165 pKa = 4.14DD166 pKa = 4.15APSYY170 pKa = 9.79LASVACEE177 pKa = 3.84INNPVPVAVIGFPDD191 pKa = 3.69ARR193 pKa = 11.84HH194 pKa = 5.72VINVIVDD201 pKa = 3.52DD202 pKa = 4.36VVAVGDD208 pKa = 3.96NLAEE212 pKa = 4.17MVSIFPNPTSSVLNINLPSNIEE234 pKa = 4.11VLSSALVDD242 pKa = 3.36VLGRR246 pKa = 11.84TTGVVYY252 pKa = 10.95SNGQMDD258 pKa = 4.08VSGLSQGVYY267 pKa = 9.83FLKK270 pKa = 11.07LEE272 pKa = 4.26TTQGSLTQRR281 pKa = 11.84IVKK284 pKa = 9.23QQ285 pKa = 3.32

Molecular weight: 29.81 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A410G096|A0A410G096_9FLAO DUF3095 domain-containing protein OS=Aequorivita sp. H23M31 OX=2494375 GN=EI546_02620 PE=4 SV=1
MM1 pKa = 7.48LLKK4 pKa = 10.16HH5 pKa = 6.8DD6 pKa = 4.58RR7 pKa = 11.84CTKK10 pKa = 8.57NNKK13 pKa = 9.27NFVHH17 pKa = 6.06YY18 pKa = 9.5FALSRR23 pKa = 11.84FVVSFCRR30 pKa = 11.84DD31 pKa = 3.08SLQSRR36 pKa = 11.84FVVLSSRR43 pKa = 11.84GAFPSCYY50 pKa = 9.87LPIVMPFNNQSPHH63 pKa = 5.21RR64 pKa = 4.27

Molecular weight: 7.51 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

3051

0

3051

1022300

20

3897

335.1

37.85

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

6.254 ± 0.043

0.726 ± 0.017

5.651 ± 0.04

6.926 ± 0.045

5.267 ± 0.036

6.561 ± 0.05

1.728 ± 0.02

7.885 ± 0.046

7.478 ± 0.072

9.29 ± 0.056

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.324 ± 0.022

5.874 ± 0.044

3.623 ± 0.03

3.33 ± 0.024

3.82 ± 0.036

6.524 ± 0.038

5.54 ± 0.067

6.104 ± 0.033

1.039 ± 0.015

4.056 ± 0.03
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski