Penicillium vulpinum

Taxonomy: cellular organisms; Eukaryota; Opisthokonta; Fungi; Dikarya; Ascomycota; saccharomyceta; Pezizomycotina; leotiomyceta; Eurotiomycetes; Eurotiomycetidae; Eurotiales; Aspergillaceae; Penicillium

Average proteome isoelectric point is 6.31

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 10245 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A1V6R2S4|A0A1V6R2S4_9EURO Uncharacterized protein OS=Penicillium vulpinum OX=29845 GN=PENVUL_c102G09685 PE=4 SV=1
QQ1 pKa = 7.03SLSVHH6 pKa = 6.95DD7 pKa = 4.45PQLPPSTDD15 pKa = 2.23WSQQYY20 pKa = 11.05DD21 pKa = 3.21WDD23 pKa = 4.08FDD25 pKa = 4.75GILQQSLSVHH35 pKa = 6.95DD36 pKa = 4.4PQLPPSTDD44 pKa = 2.78RR45 pKa = 11.84SQQYY49 pKa = 10.87DD50 pKa = 3.01WDD52 pKa = 4.01FDD54 pKa = 4.75GILQQSLSVHH64 pKa = 6.95DD65 pKa = 4.4PQLPPSTDD73 pKa = 3.0RR74 pKa = 11.84SQQCSSDD81 pKa = 4.56LLQQDD86 pKa = 3.83PLLL89 pKa = 4.91

Molecular weight: 10.17 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A1V6SEP4|A0A1V6SEP4_9EURO PhoD domain-containing protein OS=Penicillium vulpinum OX=29845 GN=PENVUL_c001G08639 PE=4 SV=1
MM1 pKa = 7.1RR2 pKa = 11.84AKK4 pKa = 9.11WRR6 pKa = 11.84KK7 pKa = 9.07KK8 pKa = 6.93RR9 pKa = 11.84TRR11 pKa = 11.84RR12 pKa = 11.84LKK14 pKa = 9.73RR15 pKa = 11.84KK16 pKa = 7.87RR17 pKa = 11.84RR18 pKa = 11.84KK19 pKa = 8.6MRR21 pKa = 11.84ARR23 pKa = 11.84SKK25 pKa = 11.11

Molecular weight: 3.37 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

10245

0

10245

5054469

8

6349

493.4

54.68

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

8.303 ± 0.021

1.257 ± 0.009

5.637 ± 0.015

6.15 ± 0.025

3.826 ± 0.015

6.678 ± 0.02

2.423 ± 0.009

5.258 ± 0.016

4.667 ± 0.02

9.025 ± 0.026

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.27 ± 0.01

3.803 ± 0.01

6.003 ± 0.024

4.066 ± 0.015

5.876 ± 0.022

8.423 ± 0.025

5.985 ± 0.017

6.069 ± 0.018

1.475 ± 0.009

2.805 ± 0.013
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski