Macacine gammaherpesvirus 4 (Rhesus lymphocryptovirus)

Taxonomy: Viruses; Duplodnaviria; Heunggongvirae; Peploviricota; Herviviricetes; Herpesvirales; Herpesviridae; Gammaherpesvirinae; Lymphocryptovirus

Average proteome isoelectric point is 6.91

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 80 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|Q8UZC8|Q8UZC8_9GAMA BNLF2a OS=Macacine gammaherpesvirus 4 OX=45455 PE=4 SV=1
MM1 pKa = 7.49EE2 pKa = 5.08GNRR5 pKa = 11.84GRR7 pKa = 11.84GGGHH11 pKa = 5.58RR12 pKa = 11.84HH13 pKa = 5.63PRR15 pKa = 11.84CPQPHH20 pKa = 6.79ASLLFGSLLLLVAILVWFFIIMSDD44 pKa = 3.82LTQTASTVLSSFAVVLIIIIIIIMLFKK71 pKa = 10.67RR72 pKa = 11.84RR73 pKa = 11.84LLCPLGLLCIILIMIVILVSNLLTLTGQTLFVGLVILCLCILLALAVWFYY123 pKa = 11.4LMWLLRR129 pKa = 11.84EE130 pKa = 4.12YY131 pKa = 10.72GASFWTILAFCLAFLLAIVFLIIAVLLHH159 pKa = 6.18LAWFTVLVDD168 pKa = 5.16LYY170 pKa = 10.68WLLLFLAILIWIYY183 pKa = 11.02VHH185 pKa = 7.04DD186 pKa = 4.89FNRR189 pKa = 11.84AIPEE193 pKa = 3.88ALANLEE199 pKa = 4.13EE200 pKa = 4.73EE201 pKa = 4.88YY202 pKa = 11.04NHH204 pKa = 6.37QGHH207 pKa = 5.88GHH209 pKa = 6.58GGGQGDD215 pKa = 3.61EE216 pKa = 4.19HH217 pKa = 7.07QPRR220 pKa = 11.84VLLISEE226 pKa = 4.35DD227 pKa = 3.85PKK229 pKa = 9.55THH231 pKa = 6.08HH232 pKa = 6.64HH233 pKa = 6.22HH234 pKa = 6.49HH235 pKa = 6.59HH236 pKa = 6.16HH237 pKa = 6.2HH238 pKa = 5.78HH239 pKa = 6.83HH240 pKa = 6.51KK241 pKa = 10.64NSNQGDD247 pKa = 3.81PLGPYY252 pKa = 9.87VSQNGGNGGNEE263 pKa = 3.69GDD265 pKa = 3.78GGNRR269 pKa = 11.84DD270 pKa = 3.63GGNGDD275 pKa = 3.98GGNGDD280 pKa = 4.1GGNVGDD286 pKa = 4.76GGNGNGGNGDD296 pKa = 3.9GGNGDD301 pKa = 4.23GGNGDD306 pKa = 4.62GGNEE310 pKa = 4.43GPDD313 pKa = 3.37HH314 pKa = 6.93LPYY317 pKa = 10.35PIQATDD323 pKa = 3.26GGNGGEE329 pKa = 3.95GDD331 pKa = 4.35GGNEE335 pKa = 4.32GPDD338 pKa = 3.61PLPYY342 pKa = 10.11PIQATDD348 pKa = 3.62GGNGGQGDD356 pKa = 4.21GGDD359 pKa = 3.7GDD361 pKa = 4.54GGNGGNGGGGGDD373 pKa = 4.57PDD375 pKa = 4.75HH376 pKa = 7.06LPHH379 pKa = 7.6PIQATDD385 pKa = 3.53GGNSGDD391 pKa = 4.38GGDD394 pKa = 4.51GGDD397 pKa = 4.2GEE399 pKa = 5.03DD400 pKa = 4.6GEE402 pKa = 5.17GGGDD406 pKa = 3.22RR407 pKa = 11.84GPFGPYY413 pKa = 9.56VSQGPSGDD421 pKa = 4.24PDD423 pKa = 4.0HH424 pKa = 7.07LPHH427 pKa = 7.16PVQASDD433 pKa = 3.76GGDD436 pKa = 3.14GLGPYY441 pKa = 9.93GPAGPFTQGPSWPWGPFGTGPLGPWGPFGPGPCGPWGPWGPNNNHH486 pKa = 6.42GPLQEE491 pKa = 4.41TGPGGPWMLLTLGGGGNSVHH511 pKa = 6.94LNDD514 pKa = 5.28RR515 pKa = 11.84GNGGNGPQNPDD526 pKa = 2.93NSNGSGPGGPHH537 pKa = 5.25NQQPEE542 pKa = 4.44SNEE545 pKa = 3.96GGGPPGPTDD554 pKa = 3.78GGNNGPDD561 pKa = 3.71SPPSNQGPQGPEE573 pKa = 3.81GDD575 pKa = 4.47PGDD578 pKa = 4.28PADD581 pKa = 5.39PIQISYY587 pKa = 11.0YY588 pKa = 10.57DD589 pKa = 3.28

Molecular weight: 60.34 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|Q8UZE2|Q8UZE2_9GAMA BILF2 OS=Macacine gammaherpesvirus 4 OX=45455 PE=4 SV=1
MM1 pKa = 7.48GLGFRR6 pKa = 11.84GWGLHH11 pKa = 6.25EE12 pKa = 4.45PACLPGEE19 pKa = 4.31PNQRR23 pKa = 11.84TQGHH27 pKa = 6.82PAPGPSSRR35 pKa = 11.84TGQRR39 pKa = 11.84TRR41 pKa = 11.84QRR43 pKa = 11.84PGHH46 pKa = 6.35PPPEE50 pKa = 4.87RR51 pKa = 11.84GSGPRR56 pKa = 11.84GTRR59 pKa = 11.84PPAPSSRR66 pKa = 11.84TGQRR70 pKa = 11.84TRR72 pKa = 11.84QRR74 pKa = 11.84PGHH77 pKa = 6.35PPPEE81 pKa = 4.87RR82 pKa = 11.84GSGPRR87 pKa = 11.84GTRR90 pKa = 11.84PPAPSSRR97 pKa = 11.84TGQRR101 pKa = 11.84TRR103 pKa = 11.84QRR105 pKa = 11.84PGHH108 pKa = 6.35PPPEE112 pKa = 4.87RR113 pKa = 11.84GSGPRR118 pKa = 11.84GTRR121 pKa = 11.84PPAPSSRR128 pKa = 11.84TGQRR132 pKa = 11.84TRR134 pKa = 11.84QRR136 pKa = 11.84PGHH139 pKa = 6.35PPPEE143 pKa = 4.87RR144 pKa = 11.84GSGPRR149 pKa = 11.84GTRR152 pKa = 11.84PPAPSSRR159 pKa = 11.84TGQRR163 pKa = 11.84TRR165 pKa = 11.84QRR167 pKa = 11.84PGHH170 pKa = 6.35PPPEE174 pKa = 4.87RR175 pKa = 11.84GSGPRR180 pKa = 11.84GTRR183 pKa = 11.84PPAPSSRR190 pKa = 11.84TGQRR194 pKa = 11.84TRR196 pKa = 11.84QRR198 pKa = 11.84PGHH201 pKa = 6.35PPPEE205 pKa = 4.87RR206 pKa = 11.84GSGPRR211 pKa = 11.84GTRR214 pKa = 11.84PPAPSSRR221 pKa = 11.84TGQRR225 pKa = 11.84TRR227 pKa = 11.84QRR229 pKa = 11.84PGHH232 pKa = 6.35PPPEE236 pKa = 4.87RR237 pKa = 11.84GSGPRR242 pKa = 11.84GTRR245 pKa = 11.84PPAPSSRR252 pKa = 11.84TGQRR256 pKa = 11.84TRR258 pKa = 11.84QRR260 pKa = 11.84PGHH263 pKa = 6.35PPPEE267 pKa = 4.87RR268 pKa = 11.84GSGPRR273 pKa = 11.84GTRR276 pKa = 11.84PPAPSSRR283 pKa = 11.84TGQRR287 pKa = 11.84TRR289 pKa = 11.84QRR291 pKa = 11.84PGHH294 pKa = 6.35PPPEE298 pKa = 4.87RR299 pKa = 11.84GSGPRR304 pKa = 11.84GTRR307 pKa = 11.84PPAPSSRR314 pKa = 11.84TGQRR318 pKa = 11.84TRR320 pKa = 11.84QRR322 pKa = 11.84PGHH325 pKa = 6.35PPPEE329 pKa = 4.87RR330 pKa = 11.84GSGPRR335 pKa = 11.84GTRR338 pKa = 11.84PPAPSSRR345 pKa = 11.84TGQRR349 pKa = 11.84TRR351 pKa = 11.84QRR353 pKa = 11.84PGHH356 pKa = 6.35PPPEE360 pKa = 4.87RR361 pKa = 11.84GSGPRR366 pKa = 11.84GTRR369 pKa = 11.84PPAPSSRR376 pKa = 11.84TGQRR380 pKa = 11.84TRR382 pKa = 11.84QRR384 pKa = 11.84PGHH387 pKa = 6.35PPPEE391 pKa = 4.87RR392 pKa = 11.84GSGPRR397 pKa = 11.84GTRR400 pKa = 11.84PPAPSSRR407 pKa = 11.84TGQRR411 pKa = 11.84TRR413 pKa = 11.84QRR415 pKa = 11.84PGHH418 pKa = 6.35PPPEE422 pKa = 4.87RR423 pKa = 11.84GSGPRR428 pKa = 11.84GTRR431 pKa = 11.84PPAPSSRR438 pKa = 11.84TGQRR442 pKa = 11.84TRR444 pKa = 11.84QRR446 pKa = 11.84PGHH449 pKa = 6.35PPPEE453 pKa = 4.87RR454 pKa = 11.84GSGPRR459 pKa = 11.84GTRR462 pKa = 11.84PPAPSSRR469 pKa = 11.84TGQRR473 pKa = 11.84TRR475 pKa = 11.84QRR477 pKa = 11.84PGHH480 pKa = 6.35PPPEE484 pKa = 4.87RR485 pKa = 11.84GSGPRR490 pKa = 11.84GTRR493 pKa = 11.84PPAPSSRR500 pKa = 11.84TGQRR504 pKa = 11.84TRR506 pKa = 11.84QRR508 pKa = 11.84PGHH511 pKa = 6.35PPPEE515 pKa = 4.87RR516 pKa = 11.84GSGPRR521 pKa = 11.84GTRR524 pKa = 11.84PPAPSSRR531 pKa = 11.84TGQRR535 pKa = 11.84TRR537 pKa = 11.84QRR539 pKa = 11.84PGHH542 pKa = 6.35PPPEE546 pKa = 4.87RR547 pKa = 11.84GSGPRR552 pKa = 11.84GTRR555 pKa = 11.84PPAPSSRR562 pKa = 11.84TGQRR566 pKa = 11.84TRR568 pKa = 11.84QRR570 pKa = 11.84PGHH573 pKa = 6.35PPPEE577 pKa = 4.87RR578 pKa = 11.84GSGPRR583 pKa = 11.84GTRR586 pKa = 11.84PPAPSSRR593 pKa = 11.84TGQRR597 pKa = 11.84TRR599 pKa = 11.84QRR601 pKa = 11.84PGHH604 pKa = 6.35PPPEE608 pKa = 4.87RR609 pKa = 11.84GSGPRR614 pKa = 11.84GTRR617 pKa = 11.84PPAPSSRR624 pKa = 11.84TGQRR628 pKa = 11.84TRR630 pKa = 11.84QRR632 pKa = 11.84PGHH635 pKa = 6.35PPPEE639 pKa = 4.87RR640 pKa = 11.84GSGPRR645 pKa = 11.84GTRR648 pKa = 11.84PPAPSSRR655 pKa = 11.84TGQRR659 pKa = 11.84TRR661 pKa = 11.84QRR663 pKa = 11.84PGHH666 pKa = 6.35PPPEE670 pKa = 4.87RR671 pKa = 11.84GSGPRR676 pKa = 11.84GTRR679 pKa = 11.84PPAPSSRR686 pKa = 11.84TGQRR690 pKa = 11.84TRR692 pKa = 11.84QRR694 pKa = 11.84PGHH697 pKa = 6.35PPPEE701 pKa = 4.87RR702 pKa = 11.84GSGPRR707 pKa = 11.84GTRR710 pKa = 11.84PPAPSSRR717 pKa = 11.84TGQRR721 pKa = 11.84TRR723 pKa = 11.84QRR725 pKa = 11.84PGHH728 pKa = 6.35PPPEE732 pKa = 4.87RR733 pKa = 11.84GSGPRR738 pKa = 11.84GTRR741 pKa = 11.84PPAPSSRR748 pKa = 11.84TGQRR752 pKa = 11.84TRR754 pKa = 11.84QRR756 pKa = 11.84PGHH759 pKa = 6.35PPPEE763 pKa = 4.87RR764 pKa = 11.84GSGPRR769 pKa = 11.84GTRR772 pKa = 11.84PPAPSSRR779 pKa = 11.84TGQRR783 pKa = 11.84TRR785 pKa = 11.84QRR787 pKa = 11.84PGHH790 pKa = 6.35PPPEE794 pKa = 4.87RR795 pKa = 11.84GSGPRR800 pKa = 11.84GTRR803 pKa = 11.84PPAPSSRR810 pKa = 11.84TGQRR814 pKa = 11.84TRR816 pKa = 11.84QRR818 pKa = 11.84PGHH821 pKa = 6.35PPPEE825 pKa = 4.87RR826 pKa = 11.84GSGPRR831 pKa = 11.84GTRR834 pKa = 11.84PPAPSSRR841 pKa = 11.84TGQRR845 pKa = 11.84TRR847 pKa = 11.84QRR849 pKa = 11.84PGHH852 pKa = 6.51PPPEE856 pKa = 4.08QTQTLGKK863 pKa = 10.12RR864 pKa = 11.84GARR867 pKa = 11.84VFNNKK872 pKa = 8.0VYY874 pKa = 10.86KK875 pKa = 9.38LTSRR879 pKa = 11.84VCGACGVGVVGG890 pKa = 5.45

Molecular weight: 95.1 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

80

0

80

40829

59

3105

510.4

55.78

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

9.452 ± 0.461

1.876 ± 0.164

4.257 ± 0.162

5.643 ± 0.208

3.644 ± 0.206

7.781 ± 0.46

2.459 ± 0.115

3.331 ± 0.202

2.959 ± 0.191

10.216 ± 0.361

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

1.842 ± 0.116

2.851 ± 0.224

8.758 ± 0.64

3.975 ± 0.202

7.196 ± 0.382

7.272 ± 0.18

6.03 ± 0.262

6.486 ± 0.233

1.203 ± 0.082

2.77 ± 0.145
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski