Flavobacterium faecale

Taxonomy: cellular organisms; Bacteria; FCB group; Bacteroidetes/Chlorobi group; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium

Average proteome isoelectric point is 6.64

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 3658 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A2S1LDH4|A0A2S1LDH4_9FLAO DDE_3 domain-containing protein OS=Flavobacterium faecale OX=1355330 GN=FFWV33_09635 PE=4 SV=1
MM1 pKa = 7.36KK2 pKa = 10.41KK3 pKa = 10.26SVLALLFLLSLNSYY17 pKa = 9.67AQFSTTHH24 pKa = 6.45YY25 pKa = 9.89IPPVTCNNNLAEE37 pKa = 4.31DD38 pKa = 3.83QYY40 pKa = 11.69FYY42 pKa = 10.93ISTPSISPVNFKK54 pKa = 10.55IIAIGGATVTGVVSNTLPYY73 pKa = 9.78IYY75 pKa = 10.35SIGTGSSTQLMTPKK89 pKa = 9.65STIGKK94 pKa = 7.83LTNKK98 pKa = 10.09GYY100 pKa = 10.2IIEE103 pKa = 4.99AEE105 pKa = 4.09NQVYY109 pKa = 10.36VSMRR113 pKa = 11.84LNSSRR118 pKa = 11.84NTSSGYY124 pKa = 9.11NHH126 pKa = 7.44AGGIVSKK133 pKa = 10.88GNSALGQTFRR143 pKa = 11.84LGAMLNPVNTDD154 pKa = 2.75GFLLNFGSILATDD167 pKa = 3.68NNTTVTISNIPTGTLMTDD185 pKa = 3.54GTTITGPITINLNKK199 pKa = 10.28NEE201 pKa = 4.27SYY203 pKa = 11.38VLAFEE208 pKa = 4.84NGTGSVSNSAKK219 pKa = 10.22MIGALVQTDD228 pKa = 3.56KK229 pKa = 11.24PVVVNSGSFGGSNSTSLNGRR249 pKa = 11.84DD250 pKa = 3.25VGFDD254 pKa = 3.2QIVSFEE260 pKa = 4.29KK261 pKa = 10.07TGKK264 pKa = 10.32EE265 pKa = 3.91YY266 pKa = 10.64IFVKK270 pKa = 10.69GAGTNDD276 pKa = 3.15IEE278 pKa = 4.31RR279 pKa = 11.84VQLIAQVDD287 pKa = 3.65NTIVYY292 pKa = 10.06INGSTTPFATLNAGQYY308 pKa = 11.32ADD310 pKa = 3.32ITGSSFTNGNLYY322 pKa = 10.28VQTSEE327 pKa = 4.72PVFAYY332 pKa = 10.17QSIGGAANPANQNLFFVPPLNCTTPKK358 pKa = 10.24IVDD361 pKa = 4.25NIPLVDD367 pKa = 5.52LIGSNSFSDD376 pKa = 3.28NFLNIVTEE384 pKa = 4.44TGATVSINNSVLTSSPVPVSGSPGFEE410 pKa = 3.67RR411 pKa = 11.84YY412 pKa = 7.33TVNSLSGNISVKK424 pKa = 7.36STRR427 pKa = 11.84QVYY430 pKa = 9.64VSYY433 pKa = 10.54FGKK436 pKa = 10.42NGAATYY442 pKa = 10.05GGYY445 pKa = 10.72YY446 pKa = 10.15SGFDD450 pKa = 3.55TKK452 pKa = 11.18PEE454 pKa = 4.34IISNKK459 pKa = 8.11ITTTNSSCIPNVEE472 pKa = 4.5LNVNTISSYY481 pKa = 11.83DD482 pKa = 3.45SFQWFSNGVPISGQIANSFIPTTPGYY508 pKa = 9.26YY509 pKa = 9.66NVRR512 pKa = 11.84GTVSNCPLSQPLFSDD527 pKa = 4.71EE528 pKa = 4.7IPVSEE533 pKa = 5.36CPTDD537 pKa = 3.48QDD539 pKa = 3.89GDD541 pKa = 4.16GVNDD545 pKa = 5.75NIDD548 pKa = 4.02LDD550 pKa = 4.0NDD552 pKa = 3.27NDD554 pKa = 5.05GITNCTEE561 pKa = 3.97SYY563 pKa = 11.1GNQAINLTNSSSGTIAVGTYY583 pKa = 6.77TTTFTGATTTSAAVSTTPFVGAADD607 pKa = 3.94GTFVTQIPAGKK618 pKa = 10.15DD619 pKa = 3.09SFVKK623 pKa = 10.54QKK625 pKa = 9.72LTFSQPMSVALEE637 pKa = 4.14YY638 pKa = 10.4VTTANSTDD646 pKa = 3.77LLNANAEE653 pKa = 4.29YY654 pKa = 10.23IINSDD659 pKa = 3.64TNKK662 pKa = 10.07TITVSNPSNQLLIDD676 pKa = 3.65TNYY679 pKa = 11.16DD680 pKa = 3.43GIYY683 pKa = 10.24EE684 pKa = 4.32SGVTQYY690 pKa = 11.65SSFEE694 pKa = 3.32IRR696 pKa = 11.84FRR698 pKa = 11.84LNAVVPLPAGTGDD711 pKa = 3.77FRR713 pKa = 11.84FSSYY717 pKa = 9.07LTNTISITHH726 pKa = 6.6KK727 pKa = 10.82NLTDD731 pKa = 3.31SDD733 pKa = 4.52ANISTFKK740 pKa = 11.01LIATCVPIDD749 pKa = 3.6SDD751 pKa = 4.21GDD753 pKa = 3.77GKK755 pKa = 10.94ADD757 pKa = 4.61QVDD760 pKa = 3.88TDD762 pKa = 4.08SDD764 pKa = 3.85NDD766 pKa = 4.63GILDD770 pKa = 4.19NIEE773 pKa = 4.06AQVNNAVSITNADD786 pKa = 3.8TNKK789 pKa = 10.85DD790 pKa = 3.61GIDD793 pKa = 3.38NAFGSGFTPVDD804 pKa = 3.34TDD806 pKa = 3.4GDD808 pKa = 4.53GIPDD812 pKa = 3.98YY813 pKa = 11.55LDD815 pKa = 4.77LDD817 pKa = 4.09SDD819 pKa = 3.97NDD821 pKa = 4.59GINDD825 pKa = 3.59IEE827 pKa = 4.21EE828 pKa = 4.5SGTNATNKK836 pKa = 10.71DD837 pKa = 3.17IDD839 pKa = 3.62NDD841 pKa = 4.4GIMNYY846 pKa = 9.94RR847 pKa = 11.84EE848 pKa = 4.34LDD850 pKa = 3.58SDD852 pKa = 4.23NDD854 pKa = 3.51LCLDD858 pKa = 3.76VIEE861 pKa = 6.12AGFLDD866 pKa = 4.41PNNDD870 pKa = 4.01GILGNSPVTVNTKK883 pKa = 10.22GQVTSAVGYY892 pKa = 5.54TTPNNNYY899 pKa = 7.95KK900 pKa = 8.92TAAPIIITNQPNAPATCEE918 pKa = 3.9LQQAIIPVVANGDD931 pKa = 3.73SYY933 pKa = 11.42QWQVSSNGTTWTAITNGTTYY953 pKa = 11.44SNATTNQLNVNSVTTAMNGYY973 pKa = 9.4KK974 pKa = 10.25YY975 pKa = 10.23RR976 pKa = 11.84VFINRR981 pKa = 11.84IGNSCGLLSSEE992 pKa = 4.54TTLTVYY998 pKa = 9.52PIPTVNDD1005 pKa = 3.01ITLIQCDD1012 pKa = 4.49DD1013 pKa = 4.32DD1014 pKa = 6.12LDD1016 pKa = 5.46GITAFNLTEE1025 pKa = 4.0KK1026 pKa = 11.06NNIISANSTAEE1037 pKa = 3.6TFTYY1041 pKa = 10.93YY1042 pKa = 9.17KK1043 pKa = 9.4TQTAATNADD1052 pKa = 3.61SSQLIPNPLSYY1063 pKa = 11.27TNTTPLLMQVWARR1076 pKa = 11.84VVNANNCFSVAEE1088 pKa = 4.09MALKK1092 pKa = 10.51VVATQVPATFNRR1104 pKa = 11.84SFVTCDD1110 pKa = 3.98DD1111 pKa = 3.83EE1112 pKa = 6.96LDD1114 pKa = 3.67INGLNNVNNNKK1125 pKa = 9.52RR1126 pKa = 11.84DD1127 pKa = 3.6GVSAFNFSSAEE1138 pKa = 3.89NDD1140 pKa = 2.95IKK1142 pKa = 11.27ALLPSTGNYY1151 pKa = 10.23SITFYY1156 pKa = 10.97RR1157 pKa = 11.84NEE1159 pKa = 3.78ADD1161 pKa = 5.27ALSEE1165 pKa = 4.13QNKK1168 pKa = 7.8ITSTTNYY1175 pKa = 10.32RR1176 pKa = 11.84NIGYY1180 pKa = 8.62PNQQQIWGRR1189 pKa = 11.84VDD1191 pKa = 3.92SDD1193 pKa = 4.09TDD1195 pKa = 3.44NSCYY1199 pKa = 10.79GFGPYY1204 pKa = 8.13ITLTVEE1210 pKa = 4.18QLPTANPVTIARR1222 pKa = 11.84QCDD1225 pKa = 3.62DD1226 pKa = 3.69NQDD1229 pKa = 3.71GIFIFNTATLEE1240 pKa = 4.07NTLVNGQINVTATYY1254 pKa = 10.07FDD1256 pKa = 4.12AMNNPLKK1263 pKa = 10.61DD1264 pKa = 3.77ANGLLISSRR1273 pKa = 11.84FPATFSTKK1281 pKa = 10.05SQTIKK1286 pKa = 10.97AVLTNNTSSKK1296 pKa = 10.82CFDD1299 pKa = 3.42DD1300 pKa = 3.61TLITFTVDD1308 pKa = 2.88VLPQAFSVPTSLTTVCDD1325 pKa = 4.17DD1326 pKa = 4.01EE1327 pKa = 6.07LDD1329 pKa = 3.98PVNQDD1334 pKa = 2.19GRR1336 pKa = 11.84YY1337 pKa = 9.79SFNTSTFEE1345 pKa = 3.9STIIGSQTGMVVSYY1359 pKa = 10.66TDD1361 pKa = 3.15QNGNLLSSPLPNPFNTNTQNITATVTNPINPNCTATTVIPFIINPLPQISLNADD1415 pKa = 3.21GTEE1418 pKa = 4.58DD1419 pKa = 4.71EE1420 pKa = 5.59LICSNLPTFFVQLNAGILDD1439 pKa = 4.32GSPEE1443 pKa = 3.86TNYY1446 pKa = 10.32NFKK1449 pKa = 10.05WSRR1452 pKa = 11.84DD1453 pKa = 3.72GIVLPTEE1460 pKa = 4.2TNPTLDD1466 pKa = 3.54VNTKK1470 pKa = 10.33GIYY1473 pKa = 9.04TVTVSFKK1480 pKa = 8.6TTGCEE1485 pKa = 3.5RR1486 pKa = 11.84TRR1488 pKa = 11.84TIVVTPSDD1496 pKa = 3.21IAKK1499 pKa = 10.06ISTIDD1504 pKa = 3.46IEE1506 pKa = 5.64DD1507 pKa = 3.41MTDD1510 pKa = 2.79INTVIVNVTGTGNYY1524 pKa = 9.6VYY1526 pKa = 10.9SLDD1529 pKa = 3.95DD1530 pKa = 4.2ANTFFQEE1537 pKa = 3.85SNIFVNVPSGIHH1549 pKa = 6.34DD1550 pKa = 3.86VYY1552 pKa = 11.09IKK1554 pKa = 10.59DD1555 pKa = 3.67VNGCGTVSQRR1565 pKa = 11.84ISVIGLPKK1573 pKa = 10.49FFTPNNDD1580 pKa = 3.04GYY1582 pKa = 11.23NDD1584 pKa = 3.4YY1585 pKa = 11.01WNVQGIDD1592 pKa = 3.3STFNANTVIYY1602 pKa = 10.46IFDD1605 pKa = 3.85RR1606 pKa = 11.84YY1607 pKa = 10.61GKK1609 pKa = 9.92LLKK1612 pKa = 10.11QLNPLDD1618 pKa = 3.99QGWDD1622 pKa = 3.11GTYY1625 pKa = 10.92NNKK1628 pKa = 9.35PLPSDD1633 pKa = 4.15DD1634 pKa = 3.17YY1635 pKa = 9.97WYY1637 pKa = 9.53TVKK1640 pKa = 11.1LEE1642 pKa = 4.5DD1643 pKa = 3.17GRR1645 pKa = 11.84AAKK1648 pKa = 10.34GHH1650 pKa = 6.26FSLKK1654 pKa = 10.28RR1655 pKa = 3.36

Molecular weight: 178.12 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A2S1LCK1|A0A2S1LCK1_9FLAO Acyl_transf_3 domain-containing protein OS=Flavobacterium faecale OX=1355330 GN=FFWV33_07730 PE=4 SV=1
MM1 pKa = 7.54SVRR4 pKa = 11.84KK5 pKa = 9.68LKK7 pKa = 10.5PITPGQRR14 pKa = 11.84FRR16 pKa = 11.84VVNGYY21 pKa = 9.53DD22 pKa = 4.32AITTDD27 pKa = 3.14KK28 pKa = 10.95PEE30 pKa = 4.34RR31 pKa = 11.84SLIAPIKK38 pKa = 10.47NSGGRR43 pKa = 11.84NSQGKK48 pKa = 6.33MTMRR52 pKa = 11.84YY53 pKa = 7.39TGGGHH58 pKa = 4.86KK59 pKa = 9.44QRR61 pKa = 11.84YY62 pKa = 8.74RR63 pKa = 11.84IIDD66 pKa = 3.76FKK68 pKa = 10.67RR69 pKa = 11.84AKK71 pKa = 9.81EE72 pKa = 4.23GIPATVKK79 pKa = 10.68SIEE82 pKa = 4.0YY83 pKa = 10.15DD84 pKa = 3.43PNRR87 pKa = 11.84TAFIALLAYY96 pKa = 10.31ADD98 pKa = 3.96GEE100 pKa = 4.24KK101 pKa = 10.14TYY103 pKa = 10.54IIAQNGLKK111 pKa = 10.25VGQKK115 pKa = 9.86LVSGPEE121 pKa = 3.92SQPEE125 pKa = 3.92IGNTLPLSRR134 pKa = 11.84IPLGTVISCIEE145 pKa = 3.9LRR147 pKa = 11.84PGQGAVIARR156 pKa = 11.84SAGTFAQLMARR167 pKa = 11.84DD168 pKa = 4.26GKK170 pKa = 10.61FATIKK175 pKa = 9.8MPSGEE180 pKa = 4.18TRR182 pKa = 11.84LILLTCSATIGAVSNSDD199 pKa = 3.15HH200 pKa = 6.2QLVVSGKK207 pKa = 9.95AGRR210 pKa = 11.84TRR212 pKa = 11.84WLGRR216 pKa = 11.84RR217 pKa = 11.84PRR219 pKa = 11.84TRR221 pKa = 11.84PVAMNPVDD229 pKa = 3.63HH230 pKa = 7.13PMGGGEE236 pKa = 4.08GRR238 pKa = 11.84SSGGHH243 pKa = 4.7PRR245 pKa = 11.84SRR247 pKa = 11.84NGIPAKK253 pKa = 10.29GYY255 pKa = 7.29RR256 pKa = 11.84TRR258 pKa = 11.84SKK260 pKa = 10.85KK261 pKa = 10.4NPSNKK266 pKa = 10.11YY267 pKa = 8.41IVEE270 pKa = 4.07RR271 pKa = 11.84RR272 pKa = 11.84KK273 pKa = 10.24KK274 pKa = 10.1

Molecular weight: 29.83 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

3658

0

3658

1287814

25

6201

352.1

39.56

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

6.786 ± 0.048

0.776 ± 0.014

5.386 ± 0.027

6.079 ± 0.052

5.22 ± 0.033

6.38 ± 0.048

1.658 ± 0.02

7.897 ± 0.039

7.895 ± 0.052

9.09 ± 0.051

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.233 ± 0.024

6.252 ± 0.044

3.388 ± 0.028

3.527 ± 0.026

3.133 ± 0.023

6.617 ± 0.043

6.226 ± 0.076

6.342 ± 0.035

1.046 ± 0.016

4.069 ± 0.027
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski