Zygosaccharomyces rouxii (strain ATCC 2623 / CBS 732 / NBRC 1130 / NCYC 568 / NRRL Y-229) (Candida mogii)

Taxonomy: cellular organisms; Eukaryota; Opisthokonta; Fungi; Dikarya; Ascomycota; saccharomyceta; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Zygosaccharomyces; Zygosaccharomyces rouxii

Average proteome isoelectric point is 6.41

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 4987 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|C5E051|C5E051_ZYGRC Methionyl-tRNA formyltransferase mitochondrial OS=Zygosaccharomyces rouxii (strain ATCC 2623 / CBS 732 / NBRC 1130 / NCYC 568 / NRRL Y-229) OX=559307 GN=ZYRO0G09812g PE=3 SV=1
MM1 pKa = 7.53SAFNDD6 pKa = 3.73FCIVCDD12 pKa = 3.61QLIPQDD18 pKa = 4.03SLPPRR23 pKa = 11.84VDD25 pKa = 3.11EE26 pKa = 5.36LLYY29 pKa = 10.91CSEE32 pKa = 4.02EE33 pKa = 4.53CMVKK37 pKa = 9.48DD38 pKa = 4.06TSRR41 pKa = 11.84VPPAAAPAEE50 pKa = 4.15LSEE53 pKa = 4.56SASSLGDD60 pKa = 3.28VDD62 pKa = 5.45SLIASPLLLPMDD74 pKa = 4.08GMVPPPASGIEE85 pKa = 4.04DD86 pKa = 3.7SDD88 pKa = 4.13YY89 pKa = 10.89MLMEE93 pKa = 5.13LEE95 pKa = 4.61SASQAVPRR103 pKa = 11.84TQAVKK108 pKa = 10.23EE109 pKa = 4.16PCSPGAGNAVQVLDD123 pKa = 5.19RR124 pKa = 11.84VAEE127 pKa = 4.2DD128 pKa = 4.41NYY130 pKa = 11.25KK131 pKa = 10.6LWLSQCHH138 pKa = 4.84WW139 pKa = 3.86

Molecular weight: 14.99 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|C5DSX2|C5DSX2_ZYGRC ZYRO0C03674p OS=Zygosaccharomyces rouxii (strain ATCC 2623 / CBS 732 / NBRC 1130 / NCYC 568 / NRRL Y-229) OX=559307 GN=ZYRO0C03674g PE=4 SV=1
MM1 pKa = 7.6WSFARR6 pKa = 11.84NIFQVGARR14 pKa = 11.84RR15 pKa = 11.84SLFTMGNWTPTTVSPLQRR33 pKa = 11.84LLGPSPLSSGFGMGQRR49 pKa = 11.84RR50 pKa = 11.84WKK52 pKa = 10.77SRR54 pKa = 11.84GNTFQPSTLKK64 pKa = 10.3RR65 pKa = 11.84KK66 pKa = 9.59RR67 pKa = 11.84RR68 pKa = 11.84VGFLARR74 pKa = 11.84ARR76 pKa = 11.84SKK78 pKa = 10.66QGSKK82 pKa = 9.49ILQRR86 pKa = 11.84RR87 pKa = 11.84KK88 pKa = 10.2HH89 pKa = 5.52KK90 pKa = 10.63GRR92 pKa = 11.84WFLTHH97 pKa = 7.07

Molecular weight: 11.27 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

4987

0

4987

2475090

25

4926

496.3

55.96

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

5.839 ± 0.029

1.235 ± 0.015

5.92 ± 0.029

6.819 ± 0.038

4.327 ± 0.02

5.67 ± 0.039

2.234 ± 0.013

5.628 ± 0.022

6.675 ± 0.034

9.616 ± 0.044

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.091 ± 0.013

5.368 ± 0.024

4.722 ± 0.031

4.488 ± 0.031

4.873 ± 0.023

8.681 ± 0.058

5.423 ± 0.031

6.028 ± 0.025

1.107 ± 0.011

3.255 ± 0.019
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski