Cotesia congregata bracovirus

Taxonomy: Viruses; Polydnaviridae; Bracovirus

Average proteome isoelectric point is 6.99

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 150 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|Q5ZP31|Q5ZP31_9VIRU Uncharacterized protein OS=Cotesia congregata bracovirus OX=39640 GN=CcBV_10.5 PE=4 SV=1
MM1 pKa = 7.63VLEE4 pKa = 4.56VIVPQEE10 pKa = 3.89WQVLPEE16 pKa = 3.88ATLRR20 pKa = 11.84TEE22 pKa = 4.2LLYY25 pKa = 11.06LITIQEE31 pKa = 4.33TQRR34 pKa = 11.84ATSAFGVYY42 pKa = 10.3NGVTAKK48 pKa = 10.61SLEE51 pKa = 4.14FNGYY55 pKa = 9.12LWFKK59 pKa = 10.55KK60 pKa = 10.66LNDD63 pKa = 3.94LNEE66 pKa = 4.26EE67 pKa = 4.15PDD69 pKa = 3.64FNIYY73 pKa = 10.14VLLEE77 pKa = 3.85IPFIPSSSIQDD88 pKa = 3.7DD89 pKa = 4.02DD90 pKa = 4.51STCSEE95 pKa = 4.58CDD97 pKa = 3.47SEE99 pKa = 5.43QLLSDD104 pKa = 5.13DD105 pKa = 5.1EE106 pKa = 4.67PCSTCDD112 pKa = 3.15EE113 pKa = 4.43

Molecular weight: 12.86 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|Q5ZP51|Q5ZP51_9VIRU Uncharacterized protein OS=Cotesia congregata bracovirus OX=39640 GN=CcBV_4.1a PE=4 SV=1
MM1 pKa = 7.43MFRR4 pKa = 11.84KK5 pKa = 10.03AGLPTPRR12 pKa = 11.84APEE15 pKa = 4.21GRR17 pKa = 11.84SNTSNQSLVVNRR29 pKa = 11.84QRR31 pKa = 11.84DD32 pKa = 3.88RR33 pKa = 11.84YY34 pKa = 8.91PNEE37 pKa = 3.69AVLSFDD43 pKa = 3.52VTFLKK48 pKa = 10.82LGNNSLLITGII59 pKa = 3.78

Molecular weight: 6.59 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

150

0

150

41375

45

1223

275.8

31.36

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

4.824 ± 0.129

1.738 ± 0.114

5.051 ± 0.139

6.054 ± 0.16

3.981 ± 0.16

4.831 ± 0.238

2.366 ± 0.08

6.332 ± 0.211

6.364 ± 0.219

7.932 ± 0.195

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.163 ± 0.081

7.234 ± 0.25

4.727 ± 0.248

5.088 ± 0.272

5.097 ± 0.144

8.984 ± 0.255

6.238 ± 0.152

5.979 ± 0.188

0.96 ± 0.063

4.056 ± 0.138
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski