Amino acid dipepetide frequency for Hubei diptera virus 16

Apart from single amino acid frequencies one can also calculate so called amino acid dipeptide frequency.

There is 400 possibilites (441 if we consider Xaa as additional 21st amino acid representing all non-standard or unknown amino acids). Thus, if the dipeptides would be present randomly in proteins each amino acid dipeptide should be present with 0.25% frequency. As it is not the case in the nature, for better visablity all more than expected dipepetides are marked by red, and those which are underrepresented are marked by blue in the table.

All values are presented as per milles (‰), therefore need to be multiplied by 10-3.

For more information see sequence space article on Wikipedia.

AlaCysAspGluPheGlyHisIleLysLeuMetAsnProGlnArgSerThrValTrpTyrXaa
Ala
9.238AlaAla: 9.238 ± 0.0
1.155AlaCys: 1.155 ± 0.0
2.309AlaAsp: 2.309 ± 0.0
3.464AlaGlu: 3.464 ± 0.0
3.464AlaPhe: 3.464 ± 0.0
5.774AlaGly: 5.774 ± 0.0
1.155AlaHis: 1.155 ± 0.0
3.464AlaIle: 3.464 ± 0.0
9.238AlaLys: 9.238 ± 0.0
2.309AlaLeu: 2.309 ± 0.0
0.0AlaMet: 0.0 ± 0.0
0.0AlaAsn: 0.0 ± 0.0
3.464AlaPro: 3.464 ± 0.0
0.0AlaGln: 0.0 ± 0.0
11.547AlaArg: 11.547 ± 0.0
3.464AlaSer: 3.464 ± 0.0
5.774AlaThr: 5.774 ± 0.0
4.619AlaVal: 4.619 ± 0.0
3.464AlaTrp: 3.464 ± 0.0
4.619AlaTyr: 4.619 ± 0.0
0.0AlaXaa: 0.0 ± 0.0
Cys
2.309CysAla: 2.309 ± 0.0
0.0CysCys: 0.0 ± 0.0
3.464CysAsp: 3.464 ± 0.0
1.155CysGlu: 1.155 ± 0.0
0.0CysPhe: 0.0 ± 0.0
2.309CysGly: 2.309 ± 0.0
0.0CysHis: 0.0 ± 0.0
0.0CysIle: 0.0 ± 0.0
2.309CysLys: 2.309 ± 0.0
1.155CysLeu: 1.155 ± 0.0
0.0CysMet: 0.0 ± 0.0
0.0CysAsn: 0.0 ± 0.0
3.464CysPro: 3.464 ± 0.0
2.309CysGln: 2.309 ± 0.0
0.0CysArg: 0.0 ± 0.0
1.155CysSer: 1.155 ± 0.0
0.0CysThr: 0.0 ± 0.0
0.0CysVal: 0.0 ± 0.0
0.0CysTrp: 0.0 ± 0.0
0.0CysTyr: 0.0 ± 0.0
0.0CysXaa: 0.0 ± 0.0
Asp
3.464AspAla: 3.464 ± 0.0
0.0AspCys: 0.0 ± 0.0
3.464AspAsp: 3.464 ± 0.0
4.619AspGlu: 4.619 ± 0.0
1.155AspPhe: 1.155 ± 0.0
5.774AspGly: 5.774 ± 0.0
1.155AspHis: 1.155 ± 0.0
2.309AspIle: 2.309 ± 0.0
3.464AspLys: 3.464 ± 0.0
4.619AspLeu: 4.619 ± 0.0
3.464AspMet: 3.464 ± 0.0
0.0AspAsn: 0.0 ± 0.0
4.619AspPro: 4.619 ± 0.0
2.309AspGln: 2.309 ± 0.0
1.155AspArg: 1.155 ± 0.0
1.155AspSer: 1.155 ± 0.0
4.619AspThr: 4.619 ± 0.0
1.155AspVal: 1.155 ± 0.0
0.0AspTrp: 0.0 ± 0.0
6.928AspTyr: 6.928 ± 0.0
0.0AspXaa: 0.0 ± 0.0
Glu
5.774GluAla: 5.774 ± 0.0
1.155GluCys: 1.155 ± 0.0
3.464GluAsp: 3.464 ± 0.0
1.155GluGlu: 1.155 ± 0.0
2.309GluPhe: 2.309 ± 0.0
1.155GluGly: 1.155 ± 0.0
1.155GluHis: 1.155 ± 0.0
3.464GluIle: 3.464 ± 0.0
5.774GluLys: 5.774 ± 0.0
5.774GluLeu: 5.774 ± 0.0
1.155GluMet: 1.155 ± 0.0
3.464GluAsn: 3.464 ± 0.0
4.619GluPro: 4.619 ± 0.0
1.155GluGln: 1.155 ± 0.0
2.309GluArg: 2.309 ± 0.0
3.464GluSer: 3.464 ± 0.0
0.0GluThr: 0.0 ± 0.0
4.619GluVal: 4.619 ± 0.0
0.0GluTrp: 0.0 ± 0.0
3.464GluTyr: 3.464 ± 0.0
0.0GluXaa: 0.0 ± 0.0
Phe
1.155PheAla: 1.155 ± 0.0
2.309PheCys: 2.309 ± 0.0
2.309PheAsp: 2.309 ± 0.0
0.0PheGlu: 0.0 ± 0.0
0.0PhePhe: 0.0 ± 0.0
0.0PheGly: 0.0 ± 0.0
2.309PheHis: 2.309 ± 0.0
1.155PheIle: 1.155 ± 0.0
0.0PheLys: 0.0 ± 0.0
3.464PheLeu: 3.464 ± 0.0
2.309PheMet: 2.309 ± 0.0
3.464PheAsn: 3.464 ± 0.0
2.309PhePro: 2.309 ± 0.0
1.155PheGln: 1.155 ± 0.0
1.155PheArg: 1.155 ± 0.0
3.464PheSer: 3.464 ± 0.0
3.464PheThr: 3.464 ± 0.0
4.619PheVal: 4.619 ± 0.0
1.155PheTrp: 1.155 ± 0.0
0.0PheTyr: 0.0 ± 0.0
0.0PheXaa: 0.0 ± 0.0
Gly
3.464GlyAla: 3.464 ± 0.0
1.155GlyCys: 1.155 ± 0.0
1.155GlyAsp: 1.155 ± 0.0
5.774GlyGlu: 5.774 ± 0.0
0.0GlyPhe: 0.0 ± 0.0
4.619GlyGly: 4.619 ± 0.0
0.0GlyHis: 0.0 ± 0.0
1.155GlyIle: 1.155 ± 0.0
4.619GlyLys: 4.619 ± 0.0
8.083GlyLeu: 8.083 ± 0.0
0.0GlyMet: 0.0 ± 0.0
2.309GlyAsn: 2.309 ± 0.0
2.309GlyPro: 2.309 ± 0.0
2.309GlyGln: 2.309 ± 0.0
4.619GlyArg: 4.619 ± 0.0
2.309GlySer: 2.309 ± 0.0
2.309GlyThr: 2.309 ± 0.0
5.774GlyVal: 5.774 ± 0.0
1.155GlyTrp: 1.155 ± 0.0
1.155GlyTyr: 1.155 ± 0.0
0.0GlyXaa: 0.0 ± 0.0
His
2.309HisAla: 2.309 ± 0.0
0.0HisCys: 0.0 ± 0.0
1.155HisAsp: 1.155 ± 0.0
1.155HisGlu: 1.155 ± 0.0
2.309HisPhe: 2.309 ± 0.0
0.0HisGly: 0.0 ± 0.0
0.0HisHis: 0.0 ± 0.0
3.464HisIle: 3.464 ± 0.0
3.464HisLys: 3.464 ± 0.0
5.774HisLeu: 5.774 ± 0.0
0.0HisMet: 0.0 ± 0.0
0.0HisAsn: 0.0 ± 0.0
1.155HisPro: 1.155 ± 0.0
0.0HisGln: 0.0 ± 0.0
0.0HisArg: 0.0 ± 0.0
1.155HisSer: 1.155 ± 0.0
2.309HisThr: 2.309 ± 0.0
1.155HisVal: 1.155 ± 0.0
0.0HisTrp: 0.0 ± 0.0
0.0HisTyr: 0.0 ± 0.0
0.0HisXaa: 0.0 ± 0.0
Ile
1.155IleAla: 1.155 ± 0.0
0.0IleCys: 0.0 ± 0.0
3.464IleAsp: 3.464 ± 0.0
2.309IleGlu: 2.309 ± 0.0
1.155IlePhe: 1.155 ± 0.0
5.774IleGly: 5.774 ± 0.0
1.155IleHis: 1.155 ± 0.0
1.155IleIle: 1.155 ± 0.0
1.155IleLys: 1.155 ± 0.0
2.309IleLeu: 2.309 ± 0.0
2.309IleMet: 2.309 ± 0.0
1.155IleAsn: 1.155 ± 0.0
2.309IlePro: 2.309 ± 0.0
1.155IleGln: 1.155 ± 0.0
2.309IleArg: 2.309 ± 0.0
2.309IleSer: 2.309 ± 0.0
2.309IleThr: 2.309 ± 0.0
5.774IleVal: 5.774 ± 0.0
0.0IleTrp: 0.0 ± 0.0
1.155IleTyr: 1.155 ± 0.0
0.0IleXaa: 0.0 ± 0.0
Lys
2.309LysAla: 2.309 ± 0.0
3.464LysCys: 3.464 ± 0.0
1.155LysAsp: 1.155 ± 0.0
3.464LysGlu: 3.464 ± 0.0
2.309LysPhe: 2.309 ± 0.0
3.464LysGly: 3.464 ± 0.0
3.464LysHis: 3.464 ± 0.0
1.155LysIle: 1.155 ± 0.0
0.0LysLys: 0.0 ± 0.0
3.464LysLeu: 3.464 ± 0.0
1.155LysMet: 1.155 ± 0.0
4.619LysAsn: 4.619 ± 0.0
1.155LysPro: 1.155 ± 0.0
3.464LysGln: 3.464 ± 0.0
8.083LysArg: 8.083 ± 0.0
1.155LysSer: 1.155 ± 0.0
2.309LysThr: 2.309 ± 0.0
3.464LysVal: 3.464 ± 0.0
2.309LysTrp: 2.309 ± 0.0
5.774LysTyr: 5.774 ± 0.0
0.0LysXaa: 0.0 ± 0.0
Leu
5.774LeuAla: 5.774 ± 0.0
4.619LeuCys: 4.619 ± 0.0
3.464LeuAsp: 3.464 ± 0.0
4.619LeuGlu: 4.619 ± 0.0
4.619LeuPhe: 4.619 ± 0.0
2.309LeuGly: 2.309 ± 0.0
1.155LeuHis: 1.155 ± 0.0
2.309LeuIle: 2.309 ± 0.0
3.464LeuLys: 3.464 ± 0.0
8.083LeuLeu: 8.083 ± 0.0
3.464LeuMet: 3.464 ± 0.0
0.0LeuAsn: 0.0 ± 0.0
3.464LeuPro: 3.464 ± 0.0
2.309LeuGln: 2.309 ± 0.0
6.928LeuArg: 6.928 ± 0.0
8.083LeuSer: 8.083 ± 0.0
8.083LeuThr: 8.083 ± 0.0
5.774LeuVal: 5.774 ± 0.0
2.309LeuTrp: 2.309 ± 0.0
2.309LeuTyr: 2.309 ± 0.0
0.0LeuXaa: 0.0 ± 0.0
Met
3.464MetAla: 3.464 ± 0.0
0.0MetCys: 0.0 ± 0.0
1.155MetAsp: 1.155 ± 0.0
5.774MetGlu: 5.774 ± 0.0
2.309MetPhe: 2.309 ± 0.0
0.0MetGly: 0.0 ± 0.0
1.155MetHis: 1.155 ± 0.0
1.155MetIle: 1.155 ± 0.0
1.155MetLys: 1.155 ± 0.0
1.155MetLeu: 1.155 ± 0.0
1.155MetMet: 1.155 ± 0.0
1.155MetAsn: 1.155 ± 0.0
2.309MetPro: 2.309 ± 0.0
0.0MetGln: 0.0 ± 0.0
0.0MetArg: 0.0 ± 0.0
1.155MetSer: 1.155 ± 0.0
2.309MetThr: 2.309 ± 0.0
1.155MetVal: 1.155 ± 0.0
0.0MetTrp: 0.0 ± 0.0
1.155MetTyr: 1.155 ± 0.0
0.0MetXaa: 0.0 ± 0.0
Asn
3.464AsnAla: 3.464 ± 0.0
0.0AsnCys: 0.0 ± 0.0
2.309AsnAsp: 2.309 ± 0.0
3.464AsnGlu: 3.464 ± 0.0
1.155AsnPhe: 1.155 ± 0.0
2.309AsnGly: 2.309 ± 0.0
1.155AsnHis: 1.155 ± 0.0
5.774AsnIle: 5.774 ± 0.0
1.155AsnLys: 1.155 ± 0.0
2.309AsnLeu: 2.309 ± 0.0
0.0AsnMet: 0.0 ± 0.0
3.464AsnAsn: 3.464 ± 0.0
4.619AsnPro: 4.619 ± 0.0
1.155AsnGln: 1.155 ± 0.0
3.464AsnArg: 3.464 ± 0.0
1.155AsnSer: 1.155 ± 0.0
3.464AsnThr: 3.464 ± 0.0
4.619AsnVal: 4.619 ± 0.0
1.155AsnTrp: 1.155 ± 0.0
0.0AsnTyr: 0.0 ± 0.0
0.0AsnXaa: 0.0 ± 0.0
Pro
4.619ProAla: 4.619 ± 0.0
1.155ProCys: 1.155 ± 0.0
0.0ProAsp: 0.0 ± 0.0
3.464ProGlu: 3.464 ± 0.0
0.0ProPhe: 0.0 ± 0.0
3.464ProGly: 3.464 ± 0.0
1.155ProHis: 1.155 ± 0.0
4.619ProIle: 4.619 ± 0.0
2.309ProLys: 2.309 ± 0.0
3.464ProLeu: 3.464 ± 0.0
0.0ProMet: 0.0 ± 0.0
2.309ProAsn: 2.309 ± 0.0
2.309ProPro: 2.309 ± 0.0
1.155ProGln: 1.155 ± 0.0
5.774ProArg: 5.774 ± 0.0
3.464ProSer: 3.464 ± 0.0
3.464ProThr: 3.464 ± 0.0
3.464ProVal: 3.464 ± 0.0
2.309ProTrp: 2.309 ± 0.0
3.464ProTyr: 3.464 ± 0.0
0.0ProXaa: 0.0 ± 0.0
Gln
2.309GlnAla: 2.309 ± 0.0
0.0GlnCys: 0.0 ± 0.0
1.155GlnAsp: 1.155 ± 0.0
1.155GlnGlu: 1.155 ± 0.0
0.0GlnPhe: 0.0 ± 0.0
1.155GlnGly: 1.155 ± 0.0
1.155GlnHis: 1.155 ± 0.0
0.0GlnIle: 0.0 ± 0.0
3.464GlnLys: 3.464 ± 0.0
2.309GlnLeu: 2.309 ± 0.0
0.0GlnMet: 0.0 ± 0.0
2.309GlnAsn: 2.309 ± 0.0
1.155GlnPro: 1.155 ± 0.0
3.464GlnGln: 3.464 ± 0.0
4.619GlnArg: 4.619 ± 0.0
1.155GlnSer: 1.155 ± 0.0
1.155GlnThr: 1.155 ± 0.0
3.464GlnVal: 3.464 ± 0.0
0.0GlnTrp: 0.0 ± 0.0
0.0GlnTyr: 0.0 ± 0.0
0.0GlnXaa: 0.0 ± 0.0
Arg
4.619ArgAla: 4.619 ± 0.0
1.155ArgCys: 1.155 ± 0.0
5.774ArgAsp: 5.774 ± 0.0
3.464ArgGlu: 3.464 ± 0.0
1.155ArgPhe: 1.155 ± 0.0
2.309ArgGly: 2.309 ± 0.0
1.155ArgHis: 1.155 ± 0.0
1.155ArgIle: 1.155 ± 0.0
3.464ArgLys: 3.464 ± 0.0
8.083ArgLeu: 8.083 ± 0.0
2.309ArgMet: 2.309 ± 0.0
11.547ArgAsn: 11.547 ± 0.0
4.619ArgPro: 4.619 ± 0.0
0.0ArgGln: 0.0 ± 0.0
5.774ArgArg: 5.774 ± 0.0
4.619ArgSer: 4.619 ± 0.0
9.238ArgThr: 9.238 ± 0.0
2.309ArgVal: 2.309 ± 0.0
0.0ArgTrp: 0.0 ± 0.0
2.309ArgTyr: 2.309 ± 0.0
0.0ArgXaa: 0.0 ± 0.0
Ser
5.774SerAla: 5.774 ± 0.0
0.0SerCys: 0.0 ± 0.0
1.155SerAsp: 1.155 ± 0.0
3.464SerGlu: 3.464 ± 0.0
1.155SerPhe: 1.155 ± 0.0
3.464SerGly: 3.464 ± 0.0
4.619SerHis: 4.619 ± 0.0
2.309SerIle: 2.309 ± 0.0
2.309SerLys: 2.309 ± 0.0
4.619SerLeu: 4.619 ± 0.0
4.619SerMet: 4.619 ± 0.0
0.0SerAsn: 0.0 ± 0.0
1.155SerPro: 1.155 ± 0.0
1.155SerGln: 1.155 ± 0.0
3.464SerArg: 3.464 ± 0.0
2.309SerSer: 2.309 ± 0.0
4.619SerThr: 4.619 ± 0.0
9.238SerVal: 9.238 ± 0.0
0.0SerTrp: 0.0 ± 0.0
2.309SerTyr: 2.309 ± 0.0
0.0SerXaa: 0.0 ± 0.0
Thr
5.774ThrAla: 5.774 ± 0.0
1.155ThrCys: 1.155 ± 0.0
8.083ThrAsp: 8.083 ± 0.0
0.0ThrGlu: 0.0 ± 0.0
5.774ThrPhe: 5.774 ± 0.0
3.464ThrGly: 3.464 ± 0.0
2.309ThrHis: 2.309 ± 0.0
0.0ThrIle: 0.0 ± 0.0
3.464ThrLys: 3.464 ± 0.0
6.928ThrLeu: 6.928 ± 0.0
2.309ThrMet: 2.309 ± 0.0
2.309ThrAsn: 2.309 ± 0.0
3.464ThrPro: 3.464 ± 0.0
1.155ThrGln: 1.155 ± 0.0
3.464ThrArg: 3.464 ± 0.0
5.774ThrSer: 5.774 ± 0.0
4.619ThrThr: 4.619 ± 0.0
5.774ThrVal: 5.774 ± 0.0
1.155ThrTrp: 1.155 ± 0.0
2.309ThrTyr: 2.309 ± 0.0
0.0ThrXaa: 0.0 ± 0.0
Val
5.774ValAla: 5.774 ± 0.0
0.0ValCys: 0.0 ± 0.0
8.083ValAsp: 8.083 ± 0.0
3.464ValGlu: 3.464 ± 0.0
3.464ValPhe: 3.464 ± 0.0
2.309ValGly: 2.309 ± 0.0
0.0ValHis: 0.0 ± 0.0
4.619ValIle: 4.619 ± 0.0
3.464ValLys: 3.464 ± 0.0
6.928ValLeu: 6.928 ± 0.0
2.309ValMet: 2.309 ± 0.0
3.464ValAsn: 3.464 ± 0.0
1.155ValPro: 1.155 ± 0.0
3.464ValGln: 3.464 ± 0.0
8.083ValArg: 8.083 ± 0.0
4.619ValSer: 4.619 ± 0.0
2.309ValThr: 2.309 ± 0.0
5.774ValVal: 5.774 ± 0.0
0.0ValTrp: 0.0 ± 0.0
5.774ValTyr: 5.774 ± 0.0
0.0ValXaa: 0.0 ± 0.0
Trp
0.0TrpAla: 0.0 ± 0.0
1.155TrpCys: 1.155 ± 0.0
1.155TrpAsp: 1.155 ± 0.0
1.155TrpGlu: 1.155 ± 0.0
1.155TrpPhe: 1.155 ± 0.0
0.0TrpGly: 0.0 ± 0.0
0.0TrpHis: 0.0 ± 0.0
0.0TrpIle: 0.0 ± 0.0
0.0TrpLys: 0.0 ± 0.0
1.155TrpLeu: 1.155 ± 0.0
0.0TrpMet: 0.0 ± 0.0
1.155TrpAsn: 1.155 ± 0.0
1.155TrpPro: 1.155 ± 0.0
0.0TrpGln: 0.0 ± 0.0
0.0TrpArg: 0.0 ± 0.0
1.155TrpSer: 1.155 ± 0.0
3.464TrpThr: 3.464 ± 0.0
1.155TrpVal: 1.155 ± 0.0
0.0TrpTrp: 0.0 ± 0.0
1.155TrpTyr: 1.155 ± 0.0
0.0TrpXaa: 0.0 ± 0.0
Tyr
5.774TyrAla: 5.774 ± 0.0
1.155TyrCys: 1.155 ± 0.0
1.155TyrAsp: 1.155 ± 0.0
2.309TyrGlu: 2.309 ± 0.0
2.309TyrPhe: 2.309 ± 0.0
4.619TyrGly: 4.619 ± 0.0
1.155TyrHis: 1.155 ± 0.0
1.155TyrIle: 1.155 ± 0.0
3.464TyrLys: 3.464 ± 0.0
1.155TyrLeu: 1.155 ± 0.0
0.0TyrMet: 0.0 ± 0.0
3.464TyrAsn: 3.464 ± 0.0
1.155TyrPro: 1.155 ± 0.0
2.309TyrGln: 2.309 ± 0.0
2.309TyrArg: 2.309 ± 0.0
4.619TyrSer: 4.619 ± 0.0
3.464TyrThr: 3.464 ± 0.0
2.309TyrVal: 2.309 ± 0.0
0.0TyrTrp: 0.0 ± 0.0
2.309TyrTyr: 2.309 ± 0.0
0.0TyrXaa: 0.0 ± 0.0
Xaa
0.0XaaAla: 0.0 ± 0.0
0.0XaaCys: 0.0 ± 0.0
0.0XaaAsp: 0.0 ± 0.0
0.0XaaGlu: 0.0 ± 0.0
0.0XaaPhe: 0.0 ± 0.0
0.0XaaGly: 0.0 ± 0.0
0.0XaaHis: 0.0 ± 0.0
0.0XaaIle: 0.0 ± 0.0
0.0XaaLys: 0.0 ± 0.0
0.0XaaLeu: 0.0 ± 0.0
0.0XaaMet: 0.0 ± 0.0
0.0XaaAsn: 0.0 ± 0.0
0.0XaaPro: 0.0 ± 0.0
0.0XaaGln: 0.0 ± 0.0
0.0XaaArg: 0.0 ± 0.0
0.0XaaSer: 0.0 ± 0.0
0.0XaaThr: 0.0 ± 0.0
0.0XaaVal: 0.0 ± 0.0
0.0XaaTrp: 0.0 ± 0.0
0.0XaaTyr: 0.0 ± 0.0
0.0XaaXaa: 0.0 ± 0.0
Statistics based on 1 proteins (867 amino acids)

Note: The error has been estimated with the bootstraping (x100) at the protein level

Above dipeptide statistics (among other stats for this proteome) you can download from this CSV file
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski