Pacific flying fox faeces associated circular DNA virus-5

Taxonomy: Viruses; unclassified viruses

Average proteome isoelectric point is 6.95

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 2 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A140CTT9|A0A140CTT9_9VIRU Putative capsid protein OS=Pacific flying fox faeces associated circular DNA virus-5 OX=1796014 PE=4 SV=1
MM1 pKa = 7.09GWRR4 pKa = 11.84RR5 pKa = 11.84YY6 pKa = 8.83HH7 pKa = 5.04RR8 pKa = 11.84HH9 pKa = 5.05SRR11 pKa = 11.84RR12 pKa = 11.84KK13 pKa = 7.64YY14 pKa = 8.06HH15 pKa = 7.42KK16 pKa = 10.45ARR18 pKa = 11.84QAYY21 pKa = 10.22DD22 pKa = 3.03NFAFFIPHH30 pKa = 5.19SVIYY34 pKa = 10.31LALQGNRR41 pKa = 11.84FPGGGEE47 pKa = 4.01PIPYY51 pKa = 9.4YY52 pKa = 10.04PRR54 pKa = 11.84VYY56 pKa = 11.1GNILNFTEE64 pKa = 4.72PYY66 pKa = 9.94IGISVTQGAPQLFYY80 pKa = 10.88FQLNDD85 pKa = 3.13IPNYY89 pKa = 10.39LQFTGLYY96 pKa = 8.14DD97 pKa = 2.99QYY99 pKa = 10.85RR100 pKa = 11.84ISRR103 pKa = 11.84ITASFFPSHH112 pKa = 6.48TSQPINNSAYY122 pKa = 9.74MKK124 pKa = 10.45TDD126 pKa = 3.48GTWHH130 pKa = 5.19QTSDD134 pKa = 3.57PDD136 pKa = 4.71AVTEE140 pKa = 4.05QYY142 pKa = 7.36TTGVSSHH149 pKa = 6.71SDD151 pKa = 2.5SGTYY155 pKa = 10.8YY156 pKa = 9.79NTFGDD161 pKa = 4.65FMMTCWVDD169 pKa = 3.21VDD171 pKa = 4.21GTNSSLTQSSYY182 pKa = 10.4QNVTQLHH189 pKa = 5.65KK190 pKa = 10.44WRR192 pKa = 11.84WTEE195 pKa = 3.57KK196 pKa = 10.73HH197 pKa = 6.28EE198 pKa = 4.17FTFWPKK204 pKa = 10.44PYY206 pKa = 10.14LVSANVGGTTGPAPDD221 pKa = 4.21LWQDD225 pKa = 3.53CSDD228 pKa = 4.06VDD230 pKa = 3.45IQYY233 pKa = 10.2WGLWVQALPQLPTGQLYY250 pKa = 10.2NQTQQYY256 pKa = 7.39DD257 pKa = 3.66TTNIMLYY264 pKa = 8.85CTYY267 pKa = 10.06HH268 pKa = 6.71VEE270 pKa = 4.33FRR272 pKa = 11.84FRR274 pKa = 11.84QQ275 pKa = 3.35

Molecular weight: 32.11 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A140CTT9|A0A140CTT9_9VIRU Putative capsid protein OS=Pacific flying fox faeces associated circular DNA virus-5 OX=1796014 PE=4 SV=1
MM1 pKa = 7.55GSRR4 pKa = 11.84RR5 pKa = 11.84YY6 pKa = 10.29VFTIFVSSDD15 pKa = 3.28RR16 pKa = 11.84DD17 pKa = 3.56WITEE21 pKa = 4.18GIEE24 pKa = 4.1RR25 pKa = 11.84QNVKK29 pKa = 10.72YY30 pKa = 10.41LVAQQEE36 pKa = 4.53ICSEE40 pKa = 4.15TGRR43 pKa = 11.84LHH45 pKa = 5.03WQGYY49 pKa = 9.76AEE51 pKa = 4.17FKK53 pKa = 10.1KK54 pKa = 10.48VCRR57 pKa = 11.84IPGAKK62 pKa = 9.8SILGCDD68 pKa = 3.51WAHH71 pKa = 6.33LAVPNGDD78 pKa = 2.94RR79 pKa = 11.84KK80 pKa = 10.79ANKK83 pKa = 9.88DD84 pKa = 3.61YY85 pKa = 9.52CTKK88 pKa = 10.29LASRR92 pKa = 11.84APGGEE97 pKa = 4.0SIEE100 pKa = 3.84IGKK103 pKa = 10.02FEE105 pKa = 4.68EE106 pKa = 5.35GGQGRR111 pKa = 11.84KK112 pKa = 7.1STSVAEE118 pKa = 4.06LRR120 pKa = 11.84EE121 pKa = 4.3EE122 pKa = 3.84IRR124 pKa = 11.84GGQTTLRR131 pKa = 11.84QEE133 pKa = 3.95IVEE136 pKa = 4.08GRR138 pKa = 11.84VLNIGAIRR146 pKa = 11.84YY147 pKa = 7.51FEE149 pKa = 4.32RR150 pKa = 11.84LQSEE154 pKa = 4.57LDD156 pKa = 3.06SGYY159 pKa = 10.62QRR161 pKa = 11.84GHH163 pKa = 6.19QIAAYY168 pKa = 10.4LFGTPGTGKK177 pKa = 9.75SHH179 pKa = 6.88IAHH182 pKa = 6.78AAVEE186 pKa = 4.09EE187 pKa = 4.26RR188 pKa = 11.84TWYY191 pKa = 10.97SKK193 pKa = 11.18DD194 pKa = 3.1ATTKK198 pKa = 8.77WWDD201 pKa = 3.79GYY203 pKa = 10.84SGEE206 pKa = 4.36EE207 pKa = 4.13VVIVDD212 pKa = 4.01DD213 pKa = 3.94WSGPSTQAEE222 pKa = 3.75ADD224 pKa = 3.42QWKK227 pKa = 9.48KK228 pKa = 9.3WVDD231 pKa = 3.54RR232 pKa = 11.84YY233 pKa = 9.54PCRR236 pKa = 11.84VEE238 pKa = 4.08TKK240 pKa = 10.41GGHH243 pKa = 4.53VWLKK247 pKa = 7.19TKK249 pKa = 9.64QWIFTSNVRR258 pKa = 11.84WVALPVFFDD267 pKa = 3.36AALKK271 pKa = 10.55RR272 pKa = 11.84RR273 pKa = 11.84FIGNGG278 pKa = 3.03

Molecular weight: 31.57 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

2

0

2

553

275

278

276.5

31.84

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

5.787 ± 1.353

1.447 ± 0.269

5.063 ± 0.296

5.063 ± 2.182

4.702 ± 0.846

8.68 ± 1.341

2.893 ± 0.563

5.244 ± 0.667

4.34 ± 1.634

5.425 ± 0.298

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

1.085 ± 0.555

3.617 ± 1.116

4.34 ± 1.395

6.329 ± 1.265

6.329 ± 1.213

6.51 ± 0.302

7.595 ± 1.408

5.787 ± 0.802

3.797 ± 0.397

5.967 ± 1.815
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski